Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 5.2e-116 421.0 206 100.0
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 7.4e-86 320.9 207 81.2
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 8.2e-85 317.4 210 78.1
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 3.2e-81 305.4 206 76.7
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 7.6e-75 284.3 204 74.5
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 7.6e-75 284.3 203 74.4
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 3.0e-71 272.3 203 72.4
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 5.3e-68 261.5 217 65.9
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 6.9e-68 261.2 197 69.5
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 1.2e-67 260.4 179 74.3
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 1.4e-65 253.4 207 66.2
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 9.4e-65 250.8 209 63.2
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 4.6e-64 248.4 209 62.7
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 6.1e-64 248.1 183 68.9
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 7.9e-64 247.7 215 62.3
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 1.8e-63 246.5 198 65.2
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 3.0e-63 245.7 211 63.0
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 5.1e-63 245.0 209 62.2
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 2.0e-62 243.0 207 66.7
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 2.2e-61 239.6 190 65.3
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 3.7e-61 238.8 208 61.1
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 4.8e-61 238.4 157 72.6
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 8.2e-61 237.7 208 61.1
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 2.4e-60 236.1 188 63.3
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 2.4e-60 236.1 178 66.9
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 9.1e-60 234.2 174 67.2
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 2.0e-59 233.0 187 64.7
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 4.5e-59 231.9 195 63.6
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 7.7e-59 231.1 190 61.6
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 1.0e-58 230.7 201 60.2
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 2.9e-58 229.2 196 61.2
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 3.8e-58 228.8 195 60.0
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 3.8e-58 228.8 196 60.7
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 3.8e-58 228.8 176 65.3
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 5.0e-58 228.4 148 71.6
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 1.1e-57 227.3 164 68.9
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 1.9e-57 226.5 176 65.3
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 2.5e-57 226.1 150 73.3
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 4.2e-57 225.3 200 61.5
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 5.5e-57 224.9 189 61.9
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 5.5e-57 224.9 185 63.2
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 7.2e-57 224.6 182 64.3
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 1.6e-56 223.4 204 58.3
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 2.7e-56 222.6 172 64.5
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 8.8e-55 217.6 176 62.5
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 8.8e-55 217.6 176 62.5
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 1.1e-54 217.2 147 71.4
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.5e-54 216.9 146 69.9
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.0e-54 216.5 176 61.9
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.0e-54 216.5 176 61.9
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.0e-54 216.5 176 61.9
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 2.6e-54 216.1 154 64.9
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 3.3e-54 215.7 146 69.9
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 7.4e-54 214.5 143 71.3
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 1.3e-53 213.8 161 64.0
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 1.3e-53 213.8 175 61.7
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 2.8e-53 212.6 152 63.8
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 2.8e-53 212.6 152 65.1
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 3.7e-53 212.2 185 58.4
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 4.8e-53 211.8 150 65.3
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 4.8e-53 211.8 156 64.7
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 4.8e-53 211.8 168 63.7
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 1.1e-52 210.7 185 60.5
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 1.1e-52 210.7 189 60.3
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 1.4e-52 210.3 150 63.3
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 1.4e-52 210.3 157 63.1
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 1.8e-52 209.9 168 63.1
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 7.0e-52 208.0 197 53.8
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 9.1e-52 207.6 173 57.8
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 9.1e-52 207.6 198 53.5
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 1.6e-51 206.8 156 65.4
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 2.0e-51 206.5 194 52.6
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 4.5e-51 205.3 196 53.6
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 4.5e-51 205.3 170 61.2
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 4.5e-51 205.3 149 62.4
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 5.9e-51 204.9 173 60.7
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 1.7e-50 203.4 191 53.4
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 1.1e-49 200.7 188 54.3
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 5.5e-49 198.4 199 54.8
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 7.2e-49 198.0 237 48.9
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 1.2e-48 197.2 175 60.6
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 8.0e-48 194.5 232 49.1
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 4.1e-44 182.2 182 55.5
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 4.1e-44 182.2 148 64.2
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 2.0e-43 179.9 146 61.6
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 3.5e-43 179.1 148 60.8
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 5.9e-43 178.3 206 47.6
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 1.0e-42 177.6 125 66.4
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 2.7e-40 169.5 142 61.3
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 5.7e-38 161.8 155 54.2
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 3.7e-37 159.1 174 45.4
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 3.7e-37 159.1 174 45.4
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 9.1e-36 154.5 155 49.0
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.5e-33 147.1 146 54.8
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 8.0e-32 141.4 87 75.9
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 2.2e-29 133.3 164 42.7
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 1.4e-28 130.6 155 43.2
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 5.6e-25 118.6 118 53.4
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 2.9e-21 106.3 113 48.7
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 3.7e-21 105.9 182 33.5
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 3.5e-19 99.4 72 66.7
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 9.5e-17 91.3 195 39.0
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 1.6e-16 90.5 139 32.4
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 4.9e-13 79.0 86 51.2
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 4.9e-13 79.0 149 33.6
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.4e-12 76.6 194 32.0
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 3.5e-11 72.8 122 30.3
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 3.0e-10 69.7 48 70.8
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 3.3e-09 66.2 95 46.3
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 7.3e-09 65.1 44 70.5
VMungo1080G0524 Vigna mungo HOM05D007188 ORTHO05D008722 1.4e-07 60.8 32 87.5
Lalb_Chr21g0313491 Lupinus albus HOM05D007188 ORTHO05D009102 1.8e-07 60.5 83 47.0
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.8e-07 60.5 48 50.0
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 4.0e-07 59.3 60 53.3


User provided reference genes

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