Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10492_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.4e-61 236.9 109 100.0
Ca_22478_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-54 215.3 102 96.1
Ca_13678_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.1e-54 214.2 102 95.1
Ca_28370_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.8e-54 213.4 102 95.1
Ca_31096_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.8e-54 213.4 102 95.1
Ca_05231_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.7e-53 210.7 102 95.1
Ca_05491_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.7e-52 209.1 102 92.2
Ca_06513_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.8e-52 208.4 102 93.1
Ca_07256_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.8e-52 208.4 103 91.3
Ca_31217_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.1e-51 204.9 102 91.2
Ca_20984_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.6e-50 201.8 102 88.2
Ca_16771_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.0e-46 188.3 102 83.3
Ca_03568_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.1e-43 176.8 92 88.0
Ca_00657_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.1e-39 165.6 81 91.4
Ca_19385_v3 Cicer arietinum L. HOM05D000835 ORTHO05D002122 4.0e-38 161.4 76 93.4
Ca_09999_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.6e-37 158.7 75 93.3
Ca_10806_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.6e-37 158.7 76 92.1
Ca_19917_v3 Cicer arietinum L. HOM05D000012 ORTHO05D001060 2.6e-37 158.7 87 79.3
Ca_09998_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.3e-36 156.4 75 93.3
Ca_01899_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.3e-35 151.0 81 82.7
Ca_05232_v3 Cicer arietinum L. HOM05D041768 ORTHO05D002183 1.8e-19 99.4 55 80.0
Ca_05966_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.1e-19 98.2 94 50.0
Ca_04586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.2e-18 96.7 94 50.0
Ca_22851_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.2e-18 96.7 94 48.9
Ca_14105_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.6e-18 96.3 98 49.0
Ca_07671_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.0e-18 95.9 94 50.0
Ca_20151_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.7e-18 95.5 94 48.9
Ca_25322_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.5e-18 95.1 94 48.9
Ca_13087_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.8e-18 94.0 94 48.9
Ca_16741_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.8e-18 94.0 92 48.9
Ca_10886_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.3e-17 93.2 94 48.9
Ca_23731_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.9e-17 92.0 94 47.9
Ca_13604_v3 Cicer arietinum L. HOM05D041768 ORTHO05D002183 3.8e-17 91.7 52 80.8
Ca_24276_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.8e-17 91.7 43 86.0
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 5.0e-17 91.3 96 43.8
Ca_02224_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.5e-16 89.0 103 42.7
Ca_24031_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 4.3e-16 88.2 98 46.9
Ca_25328_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.3e-16 88.2 90 46.7
Ca_02311_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 7.3e-16 87.4 90 47.8
Ca_13742_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.6e-15 85.1 96 41.7
Ca_00650_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.3e-14 82.4 97 43.3
Ca_04043_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-14 82.4 93 44.1
Ca_12256_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.0e-14 81.6 35 97.1
Ca_06912_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.2e-14 81.3 97 43.3
Ca_13474_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.8e-14 80.9 117 37.6
Ca_13973_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.9e-14 80.5 91 44.0
Ca_11967_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.2e-13 80.1 98 42.9
Ca_02277_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.5e-13 79.7 95 43.2
Ca_23052_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.5e-13 79.7 96 41.7
Ca_03687_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.0e-13 79.3 92 41.3
Ca_07982_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.6e-13 79.0 93 45.2
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 4.4e-13 78.2 85 45.9
Ca_22794_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.4e-13 78.2 90 41.1
Ca_20173_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 5.8e-13 77.8 94 43.6
Ca_11909_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 7.5e-13 77.4 98 42.9
Ca_01582_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.3e-12 76.6 75 49.3
Ca_05534_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.3e-12 76.6 35 94.3
Ca_08449_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.7e-12 76.3 99 43.4
Ca_07720_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.2e-12 75.9 97 41.2
Ca_13581_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.9e-12 75.5 68 51.5
Ca_23051_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.7e-12 75.1 96 40.6
Ca_03929_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.4e-12 74.3 37 91.9
Ca_15168_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.3e-12 73.9 41 73.2
Ca_13503_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.1e-11 73.6 88 47.7
Ca_12157_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.4e-11 72.4 81 45.7
Ca_18178_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.2e-11 72.0 71 46.5
Ca_26213_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.2e-11 72.0 97 40.2
Ca_22382_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.1e-11 71.6 100 40.0
Ca_12050_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 9.2e-11 70.5 82 42.7
Ca_05967_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.8e-10 67.4 56 57.1
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-09 66.6 100 38.0
Ca_13126_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.7e-09 66.2 56 55.4
Ca_14601_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.3e-09 65.9 67 46.3
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-09 65.9 89 40.4
Ca_02962_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.6e-09 64.3 100 36.0
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 6.6e-09 64.3 85 40.0
Ca_14629_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.6e-09 63.9 76 42.1
Ca_15024_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.6e-09 63.9 92 38.0
Ca_22299_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.5e-08 62.4 97 36.1
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-08 61.6 94 37.2
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 4.3e-08 61.6 92 35.9
Ca_01382_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.6e-08 61.2 78 42.3
Ca_02615_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.6e-08 61.2 93 31.2
Ca_14679_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.6e-08 61.2 56 50.0
Ca_25437_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.6e-08 61.2 87 32.2
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 9.5e-08 60.5 99 33.3
Ca_05310_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.6e-07 59.7 69 42.0
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 2.1e-07 59.3 97 32.0
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-07 58.9 91 38.5
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-07 58.9 89 37.1
vmacro12437 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 3.6e-07 58.5 91 36.3
Ca_06407_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.7e-07 58.2 49 55.1
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-07 57.8 92 32.6
Ca_02570_v3 Cicer arietinum L. HOM05D001569 ORTHO05D002183 8.0e-07 57.4 98 27.6
Ca_12158_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.0e-07 57.4 67 43.3
Ca_12206_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-06 57.0 86 37.2
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 1.1e-06 57.0 92 32.6
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-06 57.0 92 32.6
VMungo1309G0077 Vigna mungo HOM05D000176 ORTHO05D000106 1.1e-06 57.0 108 30.6
Ca_16679_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.4e-06 56.6 83 31.3
Ca_22969_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.4e-06 56.6 70 41.4
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-06 56.6 91 35.2
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 1.4e-06 56.6 96 35.4
CSS0002500 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.3e-06 55.8 92 34.8
CSS0014815 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.3e-06 55.8 92 34.8
Ca_31358_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-06 55.8 67 38.8
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.3e-06 55.8 97 32.0
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-06 55.8 98 33.7
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 2.3e-06 55.8 68 39.7
EL10Ac9g20755 Beta vulgaris HOM05D000176 ORTHO05D000106 3.1e-06 55.5 104 32.7
CSS0028049 Camellia sinensis var. sinensis HOM05D001875 ORTHO05D000106 3.1e-06 55.5 95 35.8
CSS0045164 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.1e-06 55.5 95 35.8
Ca_07725_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.1e-06 55.5 93 29.0
Ca_14648_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.1e-06 55.5 53 43.4
Rhsim06G0121800 Rhododendron simsii HOM05D000176 ORTHO05D000106 3.1e-06 55.5 89 36.0
VMungo1215G1209 Vigna mungo HOM05D000374 ORTHO05D000238 3.1e-06 55.5 92 33.7
EL10Ac5g12113 Beta vulgaris HOM05D000176 ORTHO05D002183 4.0e-06 55.1 89 36.0
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 4.0e-06 55.1 89 36.0
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 4.0e-06 55.1 89 36.0
Lj3C925T6 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-06 55.1 100 35.0
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-06 55.1 98 31.6
Atru.chr6.3350 Acer truncatum HOM05D000176 ORTHO05D000106 5.2e-06 54.7 103 32.0
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 5.2e-06 54.7 89 36.0
EL10Ac4g08649 Beta vulgaris HOM05D000176 ORTHO05D000106 5.2e-06 54.7 86 33.7
Sabra01G0157300 Salix brachista HOM05D000176 ORTHO05D000106 5.2e-06 54.7 106 29.2
EL10Ac1g00132 Beta vulgaris HOM05D000176 ORTHO05D000106 6.8e-06 54.3 93 33.3
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 6.8e-06 54.3 86 33.7
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 6.8e-06 54.3 86 33.7
EL10Ac7g17693 Beta vulgaris HOM05D000176 ORTHO05D000106 6.8e-06 54.3 93 33.3
EL10Ac8g19525 Beta vulgaris HOM05D000176 ORTHO05D000106 6.8e-06 54.3 93 33.3
EL10Ac8g20250 Beta vulgaris HOM05D000176 ORTHO05D000106 6.8e-06 54.3 93 33.3
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 6.8e-06 54.3 86 33.7
Ca_05087_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.8e-06 54.3 88 33.0
Ca_14586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 6.8e-06 54.3 52 40.4
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 6.8e-06 54.3 97 32.0
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-06 54.3 88 34.1
PGR042G1331 Punica granatum HOM05D000176 ORTHO05D000106 6.8e-06 54.3 89 36.0
EL10Ac5g11245 Beta vulgaris HOM05D000176 ORTHO05D000106 8.9e-06 53.9 104 32.7
EL10Ac6g14114 Beta vulgaris HOM05D000176 ORTHO05D000106 8.9e-06 53.9 89 36.0
EL10As6g23633 Beta vulgaris HOM05D000176 ORTHO05D000106 8.9e-06 53.9 80 33.8
EL10As7g23796 Beta vulgaris HOM05D000176 ORTHO05D000106 8.9e-06 53.9 93 33.3
Ca_02558_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.9e-06 53.9 72 41.7
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 8.9e-06 53.9 103 29.1
Sabra02G0169600 Salix brachista HOM05D000176 ORTHO05D000106 8.9e-06 53.9 89 34.8


User provided reference genes

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