Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10484_v3 Cicer arietinum L. HOM05D004192 ORTHO05D004917 0.0e+00 1692.9 845 100.0
Psat6g175320 Pisum sativum HOM05D004192 ORTHO05D004917 0.0e+00 1463.0 850 86.2
TPR.G2517 Trifolium pratense HOM05D004192 ORTHO05D004917 0.0e+00 1440.6 929 80.3
Phvul.007G105800 Phaseolus vulgaris HOM05D004192 ORTHO05D004917 0.0e+00 1345.1 850 79.6
Lj5g0013826 Lotus japonicus HOM05D004192 ORTHO05D004917 0.0e+00 1342.8 851 79.8
VMungo0720G1942 Vigna mungo HOM05D004192 ORTHO05D004917 0.0e+00 1327.0 850 78.1
Glyma.10G201300 Glycine max HOM05D004192 ORTHO05D004917 0.0e+00 1326.2 853 79.1
Lalb_Chr02g0151281 Lupinus albus HOM05D004192 ORTHO05D004917 0.0e+00 1320.8 851 78.6
Glyma.20G189100 Glycine max HOM05D004192 ORTHO05D004917 0.0e+00 1280.8 867 77.0
arahy.Tifrunner.gnm1.ann1.CA0PQ2 Arachis hypogaea HOM05D004192 ORTHO05D004917 0.0e+00 1272.3 853 76.2
Lalb_Chr21g0313171 Lupinus albus HOM05D004192 ORTHO05D004917 0.0e+00 1270.8 849 76.6
Thecc.10G097700 Theobroma cacao HOM05D004192 ORTHO05D004917 0.0e+00 1228.8 850 71.6
COL.COLO4_34171 Corchorus olitorius HOM05D004192 ORTHO05D004917 0.0e+00 1218.8 853 71.6
CANSAT56G0904 Cannabis sativa HOM05D004192 ORTHO05D004917 0.0e+00 1207.2 854 70.7
CSS0020257 Camellia sinensis var. sinensis HOM05D004192 ORTHO05D004917 0.0e+00 1200.3 863 70.7
PGR044G0968 Punica granatum HOM05D004192 ORTHO05D004917 0.0e+00 1199.5 851 71.4
FAN01G1656 Fragaria x ananassa HOM05D004192 ORTHO05D004917 0.0e+00 1195.6 855 71.3
ClCG08G008030 Citrullus lanatus HOM05D004192 ORTHO05D004917 0.0e+00 1195.3 860 71.0
Gorai.008G097500 Gossypium raimondii HOM05D004192 ORTHO05D004917 0.0e+00 1190.3 848 69.3
TWI38G0502 Tripterygium wilfordii HOM05D004192 ORTHO05D004917 0.0e+00 1190.3 853 71.5
Gohir.A12G088900 Gossypium hirsutum HOM05D004192 ORTHO05D004917 0.0e+00 1188.7 848 69.5
FAN10G1549 Fragaria x ananassa HOM05D004192 ORTHO05D004917 0.0e+00 1187.2 855 71.0
FvH4_7g06400 Fragaria vesca HOM05D004192 ORTHO05D004917 0.0e+00 1186.4 855 71.1
Eucgr.J01026 Eucalyptus grandis HOM05D004192 ORTHO05D004917 0.0e+00 1183.7 827 72.2
CsaV3_2G032910 Cucumis sativus L. HOM05D004192 ORTHO05D004917 0.0e+00 1182.5 863 70.3
RcHm_v2.0_Chr1g0334491 Rosa chinensis HOM05D004192 ORTHO05D004917 0.0e+00 1181.4 854 70.3
MELO3C019875.2 Cucumis melo HOM05D004192 ORTHO05D004917 0.0e+00 1177.9 863 70.3
Dinv31284 Davidia involucrata HOM05D004192 ORTHO05D004917 0.0e+00 1177.9 860 70.0
FAN06G5118 Fragaria x ananassa HOM05D004192 ORTHO05D004917 0.0e+00 1174.5 883 68.9
Cc02_g10300 Coffea canephora HOM05D004192 ORTHO05D004917 0.0e+00 1166.8 860 68.1
Gohir.A01G129200 Gossypium hirsutum HOM05D004192 ORTHO05D004917 0.0e+00 1162.5 849 68.9
Sed0026233 Sechium edule HOM05D004192 ORTHO05D004917 0.0e+00 1161.0 869 68.7
Gohir.D01G118800 Gossypium hirsutum HOM05D004192 ORTHO05D004917 0.0e+00 1157.5 849 68.7
Gorai.002G144900 Gossypium raimondii HOM05D004192 ORTHO05D004917 0.0e+00 1156.7 849 68.7
MD02G1244600 Malus domestica HOM05D004192 ORTHO05D004917 0.0e+00 1148.3 864 68.4
Duzib128G0631 Durio zibethinus HOM05D004192 ORTHO05D004917 0.0e+00 1147.5 851 68.6
Duzib114G0707 Durio zibethinus HOM05D004192 ORTHO05D004917 0.0e+00 1146.0 817 71.4
THA.LOC104816452 Tarenaya hassleriana HOM05D004192 ORTHO05D004917 0.0e+00 1146.0 858 67.9
MD07G1072600 Malus domestica HOM05D004192 ORTHO05D004917 0.0e+00 1144.8 858 68.8
ECA233G2766 Erigeron canadensis HOM05D004192 ORTHO05D004917 0.0e+00 1137.5 856 67.4
HanXRQChr12g0368431 Helianthus annuus HOM05D004192 ORTHO05D004917 0.0e+00 1135.6 853 68.2
FAN03G2327 Fragaria x ananassa HOM05D004192 ORTHO05D004917 0.0e+00 1135.2 855 68.7
Gohir.D12G087300 Gossypium hirsutum HOM05D004192 ORTHO05D004917 0.0e+00 1132.9 848 67.0
Hund22302 Selenicereus undatus HOM05D004192 ORTHO05D004917 0.0e+00 1129.0 841 68.3
DCAR_019044 Daucus carota HOM05D004192 ORTHO05D004917 0.0e+00 1127.9 857 66.5
Potri.008G026900 Populus trichocarpa HOM05D004192 ORTHO05D004917 0.0e+00 1127.5 852 68.1
MSTRG.8112 Avicennia marina HOM05D004192 ORTHO05D004917 0.0e+00 1124.4 856 67.3
HanXRQChr08g0218151 Helianthus annuus HOM05D004192 ORTHO05D004917 0.0e+00 1124.4 861 66.9
Lsat_1_v5_gn_8_23081 Lactuca sativa HOM05D004192 ORTHO05D004917 0.0e+00 1124.4 856 66.9
CiPaw.13G035500 Carya illinoinensis HOM05D004192 ORTHO05D004917 0.0e+00 1120.5 854 67.9
Potri.010G233600 Populus trichocarpa HOM05D004192 ORTHO05D004917 0.0e+00 1116.3 849 68.1
AT3G10550 Arabidopsis thaliana HOM05D004192 ORTHO05D004917 0.0e+00 1115.5 853 65.8
Nn6g35085 Nelumbo nucifera HOM05D004192 ORTHO05D004917 0.0e+00 1115.1 826 67.8
Migut.F01661 Erythranthe guttata HOM05D004192 ORTHO05D004917 0.0e+00 1114.0 852 66.1
Prupe.2G090700 Prunus persica HOM05D004192 ORTHO05D004917 0.0e+00 1113.2 770 73.1
Sabra08G0018400 Salix brachista HOM05D004192 ORTHO05D004917 0.0e+00 1110.1 882 65.8
Peaxi162Scf00398g00058 Petunia axillaris HOM05D004192 ORTHO05D004917 0.0e+00 1109.0 841 67.5
EL10Ac4g08605 Beta vulgaris HOM05D004192 ORTHO05D004917 0.0e+00 1106.3 850 66.4
Carub.0003s0979 Capsella rubella HOM05D004192 ORTHO05D004917 0.0e+00 1106.3 858 65.5
Thhalv10020062m.g Eutrema salsugineum HOM05D004192 ORTHO05D004917 0.0e+00 1106.3 856 65.8
AL3G21970 Arabidopsis lyrata HOM05D004192 ORTHO05D004917 0.0e+00 1105.5 859 65.7
Sp3g08830 Schrenkiella parvula HOM05D004192 ORTHO05D004917 0.0e+00 1104.4 855 65.8
Solyc11g007670.3 Solanum lycopersicum HOM05D004192 ORTHO05D004917 0.0e+00 1101.7 824 67.5
Sopen11g003530 Solanum pennellii HOM05D004192 ORTHO05D004917 0.0e+00 1101.3 824 67.5
TAR623G0905 Trochodendron aralioides HOM05D004192 ORTHO05D004917 0.0e+00 1101.3 858 65.9
Rhsim03G0109700 Rhododendron simsii HOM05D004192 ORTHO05D004917 0.0e+00 1098.2 958 61.0
Sc20g0001360 Simmondsia chinensis HOM05D004192 ORTHO05D004917 0.0e+00 1098.2 828 66.9
Manes.10G054700 Manihot esculenta HOM05D004192 ORTHO05D004917 0.0e+00 1095.9 768 71.6
THA.LOC104823194 Tarenaya hassleriana HOM05D004192 ORTHO05D004917 0.0e+00 1095.5 856 65.3
GSVIVG01034690001 Vitis vinifera HOM05D004192 ORTHO05D004917 0.0e+00 1085.5 745 73.0
BcaNung05805 Brassica carinata HOM05D004192 ORTHO05D004917 0.0e+00 1079.3 858 63.8
BolC1t05384H Brassica oleracea HOM05D004192 ORTHO05D004917 0.0e+00 1079.3 858 63.8
Thhalv10012689m.g Eutrema salsugineum HOM05D004192 ORTHO05D004917 0.0e+00 1077.0 848 63.9
Aa31LG3G3400 Aethionema arabicum HOM05D004192 ORTHO05D004917 0.0e+00 1075.5 863 64.1
SGA_v2.0_scaffold62G21320 Striga asiatica HOM05D004192 ORTHO05D004917 1.2e-311 1072.8 915 61.0
Nn2g13965 Nelumbo nucifera HOM05D004192 ORTHO05D004917 5.2e-311 1070.8 859 65.0
Sed0024945 Sechium edule HOM05D004192 ORTHO05D004917 6.9e-311 1070.5 762 70.3
Sp6g38220 Schrenkiella parvula HOM05D004192 ORTHO05D004917 1.7e-309 1065.8 849 62.9
PSO384G3766 Papaver somniferum HOM05D004192 ORTHO05D004917 2.2e-309 1065.4 867 62.7
AL6G14190 Arabidopsis lyrata HOM05D004192 ORTHO05D004917 3.7e-309 1064.7 847 63.2
PSO339G1524 Papaver somniferum HOM05D004192 ORTHO05D004917 1.1e-308 1063.1 867 62.6
Sabra10G0181200 Salix brachista HOM05D004192 ORTHO05D004917 2.9e-306 1055.0 932 60.9
AT5G04540 Arabidopsis thaliana HOM05D004192 ORTHO05D004917 9.4e-305 1050.0 847 61.7
Aqoxy1G00968 Aquilegia oxysepala HOM05D004192 ORTHO05D004917 1.2e-304 1049.7 847 64.3
CSS0018543 Camellia sinensis var. sinensis HOM05D004192 ORTHO05D004917 8.0e-304 1047.0 730 72.3
ATR0820G117 Amborella trichopoda HOM05D004192 ORTHO05D004917 1.4e-303 1046.2 834 64.6
Lj3A933G36 Lonicera japonica HOM05D004192 ORTHO05D004917 6.8e-303 1043.9 872 63.2
BolC9t59967H Brassica oleracea HOM05D004192 ORTHO05D004917 1.5e-302 1042.7 850 61.6
BraA01t04242Z Brassica rapa HOM05D004192 ORTHO05D004917 2.6e-302 1042.0 833 63.3
HanXRQChr14g0456301 Helianthus annuus HOM05D004192 ORTHO05D004917 5.7e-302 1040.8 827 65.2
Ah.04g163610 Amaranthus hybridus HOM05D004192 ORTHO05D004917 1.1e-300 1036.6 849 63.1
A10p31560 Brassica napus HOM05D004192 ORTHO05D004917 4.1e-300 1034.6 851 61.5
BraA10t45202Z Brassica rapa HOM05D004192 ORTHO05D004917 4.1e-300 1034.6 851 61.5
C02p01980 Brassica napus HOM05D004192 ORTHO05D004917 4.5e-299 1031.2 849 61.2
BraA02t04817Z Brassica rapa HOM05D004192 ORTHO05D004917 2.3e-298 1028.9 838 62.2
Haze_02630 Corylus avellana HOM05D004192 ORTHO05D004917 2.9e-298 1028.5 1009 56.8
Carub.0006s0348 Capsella rubella HOM05D004192 ORTHO05D004917 5.0e-298 1027.7 847 61.7
BolC2t06155H Brassica oleracea HOM05D004192 ORTHO05D004917 1.9e-297 1025.8 849 61.1
Lj2C27G6 Lonicera japonica HOM05D004192 ORTHO05D004917 1.6e-296 1022.7 948 58.8
Atru.chr12.952 Acer truncatum HOM05D004192 ORTHO05D004917 8.0e-296 1020.4 702 73.1
Nitab4.5_0000593g0020 Nicotiana tabacum HOM05D004192 ORTHO05D004917 2.9e-290 1001.9 878 60.6
CAN.G135.58 Capsicum annuum HOM05D004192 ORTHO05D004917 8.6e-290 1000.3 739 68.3
HPP92_001744 Vanilla planifolia HOM05D004192 ORTHO05D004917 2.6e-286 988.8 825 61.5
BcaC06g32164 Brassica carinata HOM05D004192 ORTHO05D004917 5.4e-284 981.1 743 65.1
Aa31LG11G5410 Aethionema arabicum HOM05D004192 ORTHO05D004917 1.2e-280 969.9 850 60.0
Medtr1g492590 Medicago truncatula HOM05D004192 ORTHO05D004917 4.4e-278 961.4 539 88.3
BcaB04g21235 Brassica carinata HOM05D004192 ORTHO05D004917 1.1e-273 946.8 722 65.8
CDE06G2538 Ceratophyllum demersum HOM05D004192 ORTHO05D004917 4.7e-272 941.4 719 66.3
ECA238G3394 Erigeron canadensis HOM05D004192 ORTHO05D004917 4.6e-267 924.9 792 61.0
SEGI_16113 Sequoiadendron giganteum HOM05D004192 ORTHO05D004917 1.5e-265 919.8 840 57.5
AUR62041537 Chenopodium quinoa HOM05D004192 ORTHO05D004917 1.9e-257 892.9 828 58.0
AUR62041535 Chenopodium quinoa HOM05D004192 ORTHO05D004917 6.9e-255 884.4 829 57.8
Actinidia18569 Actinidia chinensis HOM05D004192 ORTHO05D004917 1.3e-253 880.2 606 72.6
PGSC0003DMG402027320 Solanum tuberosum HOM05D004192 ORTHO05D004917 2.9e-253 879.0 737 62.0
C09p72230 Brassica napus HOM05D004192 ORTHO05D004917 6.7e-242 841.3 663 63.2
CiPaw.14G028000 Carya illinoinensis HOM05D004192 ORTHO05D004917 4.5e-230 802.0 535 75.3
unitig_736.g22321 Utricularia gibba HOM05D004192 ORTHO05D004917 2.7e-227 792.7 852 51.6
AagrBONN_evm.TU.Sc2ySwM_368.2559 Anthoceros agrestis HOM05D004192 ORTHO05D004917 1.5e-217 760.4 846 50.2
Lsat_1_v5_gn_2_102840 Lactuca sativa HOM05D004192 ORTHO05D004917 1.0e-210 737.6 775 54.7
Pp3c18_20050 Physcomitrium patens HOM05D004192 ORTHO05D004917 1.1e-199 701.0 862 47.0
Pp3c22_15020 Physcomitrium patens HOM05D004192 ORTHO05D004917 1.5e-196 690.6 857 46.1
Mapoly0087s0031 Marchantia polymorpha HOM05D004192 ORTHO05D004917 1.2e-193 681.0 856 46.0
CARHR085080 Cardamine hirsuta HOM05D004192 ORTHO05D004917 2.0e-193 680.2 475 71.8
A01p41680 Brassica napus HOM05D004192 ORTHO05D004917 1.4e-170 604.4 461 67.0
Nitab4.5_0003408g0020 Nicotiana tabacum HOM05D004192 ORTHO05D004917 1.6e-163 580.9 756 46.6
Os08g0556700 Oryza sativa ssp. japonica HOM05D004192 ORTHO05D004917 3.1e-162 576.6 553 55.5
Ciclev10031728m.g Citrus clementina HOM05D004192 ORTHO05D004917 4.9e-160 569.3 383 73.1
CARHR208730 Cardamine hirsuta HOM05D004192 ORTHO05D004917 1.8e-154 550.8 466 59.7
Medtr1g092570 Medicago truncatula HOM05D004192 ORTHO05D004917 5.8e-153 545.8 310 89.0
SMO367G0225 Selaginella moellendorffii HOM05D004192 ORTHO05D004917 3.2e-151 540.0 807 41.6
MBI17_g20218_MAGBIO Magnolia biondii HOM05D004192 ORTHO05D004917 7.8e-150 535.4 457 60.6
SHI21315 Sapria himalayana HOM05D004192 ORTHO05D004917 7.6e-145 518.8 476 58.4
vmacro07217 Vaccinium macrocarpon HOM05D004192 ORTHO05D004917 6.4e-144 515.8 494 58.3
Hma1.2p1_0492F.1_g164750 Hydrangea macrophylla HOM05D004192 ORTHO05D004917 1.1e-140 505.0 390 65.9
arahy.Tifrunner.gnm1.ann1.VIL3TT Arachis hypogaea HOM05D004192 ORTHO05D004917 3.0e-133 480.3 313 78.9
Zm00001eb039660 Zea mays HOM05D004192 ORTHO05D004917 4.3e-124 449.9 457 54.3
Cpa.g.sc942.1 Carica papaya HOM05D004192 ORTHO05D004917 9.0e-122 442.2 297 70.4
CARHR085070 Cardamine hirsuta HOM05D004192 ORTHO05D004917 1.3e-120 438.3 382 58.1
AL3G45840 Arabidopsis lyrata HOM05D004192 ORTHO05D004917 3.4e-113 413.7 366 61.2
MBI17_g20211_MAGBIO Magnolia biondii HOM05D004192 ORTHO05D004917 6.5e-112 409.5 347 62.0
Oeu026557.1 Olea europaea HOM05D004192 ORTHO05D004917 1.2e-110 405.2 281 73.0
SHI21312 Sapria himalayana HOM05D004192 ORTHO05D004917 1.0e-104 385.6 257 71.6
HanXRQChr14g0456291 Helianthus annuus HOM05D004192 ORTHO05D004917 4.7e-86 323.6 287 58.2
Psat0s4326g0040 Pisum sativum HOM05D004192 ORTHO05D004917 3.0e-85 320.9 179 86.0
Hma1.2p1_0492F.1_g164740 Hydrangea macrophylla HOM05D004192 ORTHO05D004917 8.2e-83 312.8 201 76.1
Oeu026556.1 Olea europaea HOM05D004192 ORTHO05D004917 2.2e-72 278.1 247 60.3
Zm00001eb215930 Zea mays HOM05D004192 ORTHO05D004917 1.7e-59 235.3 185 61.1
Psat0s3097g0040 Pisum sativum HOM05D004192 ORTHO05D004917 4.9e-59 233.8 128 89.1
Cpa.g.c33984 Carica papaya HOM05D004192 ORTHO05D004917 5.6e-55 220.3 158 70.9
vmacro07216 Vaccinium macrocarpon HOM05D004192 ORTHO05D004917 2.8e-54 218.0 217 54.8
Cfa026029 Carpinus fangiana HOM05D004192 ORTHO05D004917 3.6e-46 191.0 492 30.1
QL04p040652 Quercus lobata HOM05D004192 ORTHO05D004917 3.5e-41 174.5 267 41.9
PGSC0003DMG401027320 Solanum tuberosum HOM05D004192 ORTHO05D004917 1.5e-39 169.1 146 62.3
BcaB02g10205 Brassica carinata HOM05D004192 ORTHO05D004917 6.8e-29 133.7 121 57.9
SHI21313 Sapria himalayana HOM05D004192 ORTHO05D004917 7.6e-28 130.2 72 87.5
QL04p040713 Quercus lobata HOM05D004192 ORTHO05D004917 1.7e-27 129.0 111 64.9
TAR371G0071 Trochodendron aralioides HOM05D004192 ORTHO05D004917 2.4e-26 125.2 129 55.8
Actinidia18568 Actinidia chinensis HOM05D004192 ORTHO05D004917 5.3e-21 107.5 107 54.2
RcHm_v2.0_Chr4g0433221 Rosa chinensis HOM05D004192 ORTHO05D004917 7.6e-20 103.6 72 72.2
Oeu021819.1 Olea europaea HOM05D004192 ORTHO05D004917 1.1e-18 99.8 77 67.5
RcHm_v2.0_Chr0c16g0499861 Rosa chinensis HOM05D004192 ORTHO05D004917 2.5e-15 88.6 60 73.3
Nitab4.5_0003408g0010 Nicotiana tabacum HOM05D004192 ORTHO05D004917 1.2e-12 79.7 60 61.7
Rhsim01G0150300 Rhododendron simsii HOM05D004192 ORTHO05D004917 5.8e-12 77.4 92 44.6
RcHm_v2.0_Chr2g0132831 Rosa chinensis HOM05D004192 ORTHO05D004917 1.8e-08 65.9 47 68.1
AL4G18520 Arabidopsis lyrata HOM05D003414 ORTHO05D003913 8.7e-08 63.5 36 75.0
AL4G19510 Arabidopsis lyrata HOM05D002764 ORTHO05D002960 8.7e-08 63.5 36 75.0
AL5G23210 Arabidopsis lyrata HOM05D063572 ORTHO05D002960 8.7e-08 63.5 36 75.0
Lsat_1_v5_gn_6_80241 Lactuca sativa HOM05D004192 ORTHO05D004917 1.1e-07 63.2 49 67.3
Hma1.2p1_0492F.1_g164730 Hydrangea macrophylla HOM05D011107 ORTHO05D012795 6.2e-06 57.4 75 48.0


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