Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 1.8e-198 695.7 344 100.0
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 2.0e-168 595.9 346 85.8
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 2.5e-163 578.9 347 82.7
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 6.8e-161 570.9 347 83.0
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 1.2e-157 560.1 344 83.1
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 3.6e-154 548.5 345 79.7
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 3.6e-154 548.5 302 90.7
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 2.6e-152 542.3 343 79.3
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 1.3e-151 540.0 343 79.0
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 9.9e-144 513.8 322 80.1
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 2.7e-141 505.8 338 75.7
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 7.9e-133 477.6 346 69.9
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 8.7e-132 474.2 350 69.1
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 5.6e-131 471.5 325 70.8
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 7.4e-131 471.1 345 69.9
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 1.3e-130 470.3 293 78.2
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 2.8e-130 469.2 298 75.8
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 6.2e-130 468.0 305 76.4
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 1.1e-129 467.2 301 74.4
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 1.4e-129 466.8 347 69.2
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.8e-129 466.5 352 68.2
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 4.0e-129 465.3 317 71.9
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 9.0e-129 464.2 345 68.7
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 3.4e-128 462.2 339 68.4
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 5.8e-128 461.5 339 68.1
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 7.6e-128 461.1 282 78.4
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.0e-127 460.7 339 68.1
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 1.0e-127 460.7 341 68.6
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 4.9e-127 458.4 292 77.4
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.5e-126 456.1 282 77.0
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 2.7e-125 452.6 337 66.5
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 2.7e-125 452.6 290 75.2
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 3.5e-125 452.2 350 68.3
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.6e-125 451.8 330 69.1
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 6.0e-125 451.4 305 72.8
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 1.0e-124 450.7 338 66.3
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 2.3e-124 449.5 357 65.8
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 3.0e-124 449.1 323 70.0
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.5e-123 446.8 388 60.8
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 2.5e-123 446.0 293 71.3
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 6.2e-122 441.4 328 67.4
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 2.4e-121 439.5 301 72.4
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 4.1e-121 438.7 350 64.6
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 5.3e-121 438.3 279 76.7
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 9.0e-121 437.6 285 74.7
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 1.2e-120 437.2 345 63.8
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 1.2e-120 437.2 289 72.7
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.5e-120 436.8 288 72.6
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 2.0e-120 436.4 316 68.0
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 2.0e-120 436.4 296 71.3
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 2.0e-120 436.4 347 66.0
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 2.2e-119 433.0 283 72.8
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 3.8e-119 432.2 337 65.6
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 5.0e-119 431.8 339 64.0
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 5.0e-119 431.8 299 70.9
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 1.1e-118 430.6 336 64.6
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 1.1e-118 430.6 293 71.3
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 1.1e-118 430.6 289 70.6
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 1.6e-117 426.8 288 70.8
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 2.1e-117 426.4 307 68.7
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 4.6e-117 425.2 295 69.8
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 4.6e-117 425.2 301 68.8
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 7.9e-117 424.5 295 68.8
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 1.0e-116 424.1 330 63.9
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 1.3e-116 423.7 302 68.5
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.3e-116 422.9 389 58.6
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 5.1e-116 421.8 337 62.6
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 5.1e-116 421.8 300 69.3
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 6.7e-116 421.4 342 61.1
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 6.7e-116 421.4 292 70.9
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.1e-115 420.6 343 62.4
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 4.3e-115 418.7 288 69.1
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 7.4e-115 417.9 285 71.6
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 7.4e-115 417.9 302 68.2
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 3.7e-114 415.6 276 73.6
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 1.4e-113 413.7 319 65.8
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 1.8e-113 413.3 276 70.7
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 4.1e-113 412.1 309 66.0
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 5.1e-108 395.2 330 62.1
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 4.8e-106 388.7 314 64.6
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 8.5e-103 377.9 263 71.1
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.2e-102 375.6 291 67.7
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 2.7e-101 372.9 299 63.9
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 1.4e-100 370.5 317 59.3
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.7e-100 368.2 299 64.9
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 3.3e-99 365.9 287 61.3
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 1.3e-98 364.0 268 66.4
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.4e-97 359.8 316 62.3
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 1.6e-96 357.1 219 79.9
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 4.5e-96 355.5 285 61.1
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.2e-93 347.4 272 66.2
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 2.0e-91 340.1 310 59.7
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 7.5e-91 338.2 266 60.9
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 6.3e-82 308.5 204 71.1
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 5.4e-81 305.4 381 44.6
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 1.2e-80 304.3 269 62.5
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 5.7e-75 285.4 242 63.6
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 5.9e-64 248.8 308 49.4
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.7e-63 247.3 159 73.6
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 5.8e-59 232.3 140 81.4
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 1.6e-56 224.2 146 73.3
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 3.9e-55 219.5 149 71.8
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 3.2e-49 199.9 107 86.0
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.2e-48 198.0 269 46.1
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 1.0e-47 194.9 130 70.8
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 5.4e-41 172.6 108 73.1
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.0e-40 169.1 202 51.0
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.0e-40 169.1 202 51.5
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 2.0e-35 154.1 94 77.7
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 6.0e-32 142.5 82 79.3
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.0e-31 141.7 99 68.7
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.3e-23 114.0 66 74.2
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.3e-21 108.2 144 44.4
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 3.4e-19 100.1 60 78.3
TPR.G13189 Trifolium pratense HOM05D006565 ORTHO05D025622 7.6e-19 99.0 81 65.4
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.8e-18 96.7 81 59.3
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.3e-17 92.0 87 55.2
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.3e-15 88.2 60 70.0
Glyma.10G195100 Glycine max HOM05D006565 ORTHO05D025622 1.9e-14 84.3 80 58.8
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 5.3e-12 76.3 107 46.7
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 2.2e-10 70.9 44 77.3
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 4.9e-10 69.7 41 75.6
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.3e-07 61.6 37 78.4
COL.COLO4_26864 Corchorus olitorius HOM05D002341 ORTHO05D003165 5.1e-07 59.7 39 71.8
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 6.7e-07 59.3 42 66.7


User provided reference genes

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