Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10423_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 1.3e-140 503.1 254 100.0
Medtr1g090350 Medicago truncatula HOM05D005413 ORTHO05D006536 4.6e-98 361.7 257 73.9
Lj5g0017620 Lotus japonicus HOM05D005413 ORTHO05D006536 2.9e-76 289.3 249 63.9
TPR.G10267 Trifolium pratense HOM05D005413 ORTHO05D006536 8.5e-76 287.7 211 73.0
arahy.Tifrunner.gnm1.ann1.0IPW5R Arachis hypogaea HOM05D005413 ORTHO05D006536 2.8e-63 246.1 250 56.4
arahy.Tifrunner.gnm1.ann1.BD57S3 Arachis hypogaea HOM05D005413 ORTHO05D006536 2.8e-63 246.1 249 55.8
Lalb_Chr21g0312751 Lupinus albus HOM05D005413 ORTHO05D006536 8.0e-50 201.4 240 51.2
Phvul.007G136700 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 2.3e-41 173.3 191 56.0
CSS0050484 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 2.7e-37 159.8 255 43.1
Dinv04422 Davidia involucrata HOM05D005413 ORTHO05D006536 3.5e-37 159.5 265 43.8
Potri.010G244600 Populus trichocarpa HOM05D005413 ORTHO05D006536 3.0e-36 156.4 208 46.2
Potri.008G001700 Populus trichocarpa HOM05D005413 ORTHO05D006536 3.9e-36 156.0 255 40.0
Sabra10G0191100 Salix brachista HOM05D005413 ORTHO05D006536 3.3e-35 152.9 200 45.0
Potri.008G015500 Populus trichocarpa HOM05D005413 ORTHO05D006536 2.8e-34 149.8 255 38.8
Sabra08G0009400 Salix brachista HOM05D005413 ORTHO05D006536 2.0e-32 143.7 240 40.8
Cfa010502 Carpinus fangiana HOM05D005413 ORTHO05D006536 2.6e-32 143.3 240 40.8
TAR623G0045 Trochodendron aralioides HOM05D005413 ORTHO05D006536 9.9e-32 141.4 262 37.4
vmacro07276 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 4.1e-30 136.0 143 55.2
Rhsim03G0094100 Rhododendron simsii HOM05D005413 ORTHO05D006536 1.6e-29 134.0 131 56.5
Hma1.2p1_0098F.1_g048260 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 6.0e-29 132.1 190 46.3
Haze_03431 Corylus avellana HOM05D005413 ORTHO05D006536 7.8e-29 131.7 196 42.9
Nn2g14375 Nelumbo nucifera HOM05D005413 ORTHO05D006536 3.9e-28 129.4 255 36.9
Dinv03807 Davidia involucrata HOM05D005413 ORTHO05D006536 1.5e-27 127.5 163 49.7
Oeu033267.1 Olea europaea HOM05D005413 ORTHO05D006536 1.9e-27 127.1 197 44.7
Ciclev10028962m.g Citrus clementina HOM05D005413 ORTHO05D006536 3.3e-27 126.3 261 37.5
QL04p048808 Quercus lobata HOM05D005413 ORTHO05D006536 3.3e-27 126.3 187 41.7
Thecc.10G119400 Theobroma cacao HOM05D005413 ORTHO05D006536 3.3e-27 126.3 261 37.9
MBI15_g31416_MAGBIO Magnolia biondii HOM05D005413 ORTHO05D006536 1.6e-26 124.0 258 34.9
CSS0023574 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 2.1e-26 123.6 204 40.2
Hund06812 Selenicereus undatus HOM05D005413 ORTHO05D006536 2.1e-26 123.6 256 36.7
TWI79G1192 Tripterygium wilfordii HOM05D005413 ORTHO05D006536 8.1e-26 121.7 138 47.1
CiPaw.14G092700 Carya illinoinensis HOM05D005413 ORTHO05D006536 5.2e-25 119.0 227 37.4
Duzib168G1403 Durio zibethinus HOM05D005413 ORTHO05D006536 4.4e-24 115.9 265 35.5
Gohir.A05G077100 Gossypium hirsutum HOM05D005413 ORTHO05D006536 5.8e-24 115.5 270 33.3
Gorai.009G081500 Gossypium raimondii HOM05D005413 ORTHO05D006536 5.8e-24 115.5 270 33.3
Thecc.09G267600 Theobroma cacao HOM05D005413 ORTHO05D006536 5.8e-24 115.5 270 34.1
AUR62024117 Chenopodium quinoa HOM05D005413 ORTHO05D006536 7.6e-24 115.2 252 33.3
Gohir.D05G079900 Gossypium hirsutum HOM05D005413 ORTHO05D006536 1.7e-23 114.0 270 33.0
Hma1.2p1_0101F.1_g049660 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 1.7e-23 114.0 259 35.1
Lalb_Chr19g0136161 Lupinus albus HOM05D005413 ORTHO05D006536 1.7e-23 114.0 214 37.9
GSVIVG01037530001 Vitis vinifera HOM05D005413 ORTHO05D006536 6.4e-23 112.1 256 32.4
Sc09g0004800 Simmondsia chinensis HOM05D005413 ORTHO05D006536 8.4e-23 111.7 248 34.3
TAR633G2414 Trochodendron aralioides HOM05D005413 ORTHO05D006536 2.4e-22 110.2 191 38.2
Zm00001eb012330 Zea mays HOM05D005413 ORTHO05D006536 2.4e-22 110.2 260 35.8
QL01p019216 Quercus lobata HOM05D005413 ORTHO05D006536 9.3e-22 108.2 233 35.2
Ah.03g136210 Amaranthus hybridus HOM05D005413 ORTHO05D006536 1.2e-21 107.8 256 33.6
Cc01_g07840 Coffea canephora HOM05D005413 ORTHO05D006536 1.2e-21 107.8 149 41.6
Dinv18856 Davidia involucrata HOM05D005413 ORTHO05D006536 1.2e-21 107.8 259 33.6
Lj2A950G18 Lonicera japonica HOM05D005413 ORTHO05D006536 1.2e-21 107.8 212 36.3
Duzib170G0305 Durio zibethinus HOM05D005413 ORTHO05D006536 1.6e-21 107.5 266 32.7
SGA_v2.0_scaffold22G09835 Striga asiatica HOM05D005413 ORTHO05D006536 1.6e-21 107.5 177 39.5
AUR62005613 Chenopodium quinoa HOM05D005413 ORTHO05D006536 2.1e-21 107.1 200 38.0
COL.COLO4_00160 Corchorus olitorius HOM05D005413 ORTHO05D006536 2.1e-21 107.1 207 35.3
arahy.Tifrunner.gnm1.ann1.C0JSMI Arachis hypogaea HOM05D005413 ORTHO05D006536 3.5e-21 106.3 213 37.6
arahy.Tifrunner.gnm1.ann1.K4CWT5 Arachis hypogaea HOM05D005413 ORTHO05D006536 3.5e-21 106.3 213 37.6
ATR1120G017 Amborella trichopoda HOM05D005413 ORTHO05D006536 4.6e-21 105.9 261 33.0
Medtr4g050330 Medicago truncatula HOM05D005413 ORTHO05D006536 4.6e-21 105.9 209 37.3
MSTRG.12398 Avicennia marina HOM05D005413 ORTHO05D006536 1.0e-20 104.8 207 36.2
TPR.G4599 Trifolium pratense HOM05D005413 ORTHO05D006536 1.0e-20 104.8 208 36.5
Actinidia37056 Actinidia chinensis HOM05D005413 ORTHO05D006536 1.3e-20 104.4 258 32.2
FvH4_3g26150 Fragaria vesca HOM05D005413 ORTHO05D006536 1.3e-20 104.4 202 35.6
Haze_03425 Corylus avellana HOM05D005413 ORTHO05D006536 2.3e-20 103.6 140 42.1
Lj3g0006130 Lotus japonicus HOM05D005413 ORTHO05D006536 2.3e-20 103.6 206 36.9
Os03g0274700 Oryza sativa ssp. japonica HOM05D005413 ORTHO05D006536 5.1e-20 102.4 182 39.6
PGSC0003DMG400002998 Solanum tuberosum HOM05D005413 ORTHO05D006536 6.6e-20 102.1 213 35.7
Oeu031446.2 Olea europaea HOM05D005413 ORTHO05D006536 8.7e-20 101.7 210 33.8
DCAR_012252 Daucus carota HOM05D005413 ORTHO05D006536 2.5e-19 100.1 221 33.0
Nitab4.5_0008364g0010 Nicotiana tabacum HOM05D005413 ORTHO05D006536 2.5e-19 100.1 148 38.5
HanXRQChr05g0137071 Helianthus annuus HOM05D005413 ORTHO05D006536 3.3e-19 99.8 207 35.3
Nitab4.5_0000158g0110 Nicotiana tabacum HOM05D005413 ORTHO05D006536 3.3e-19 99.8 134 41.0
Actinidia11676 Actinidia chinensis HOM05D005413 ORTHO05D006536 4.3e-19 99.4 200 35.5
FAN11G2501 Fragaria x ananassa HOM05D005413 ORTHO05D006536 4.3e-19 99.4 192 35.9
Lsat_1_v5_gn_2_106300 Lactuca sativa HOM05D005413 ORTHO05D006536 4.3e-19 99.4 180 37.8
MD11G1174800 Malus domestica HOM05D005413 ORTHO05D006536 4.3e-19 99.4 207 34.8
RcHm_v2.0_Chr5g0049091 Rosa chinensis HOM05D005413 ORTHO05D006536 4.3e-19 99.4 202 34.2
ECA238G0598 Erigeron canadensis HOM05D005413 ORTHO05D006536 5.6e-19 99.0 205 36.1
Solyc11g071950.3 Solanum lycopersicum HOM05D005413 ORTHO05D006536 7.3e-19 98.6 214 36.0
Ca_19483_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 9.6e-19 98.2 206 35.9
Manes.11G103700 Manihot esculenta HOM05D005413 ORTHO05D006536 1.3e-18 97.8 264 33.7
unitig_899.g15382 Utricularia gibba HOM05D005413 ORTHO05D006536 1.3e-18 97.8 197 33.0
Eucgr.J00585 Eucalyptus grandis HOM05D005413 ORTHO05D006536 1.6e-18 97.4 260 32.3
FAN25G1874 Fragaria x ananassa HOM05D005413 ORTHO05D006536 1.6e-18 97.4 192 35.4
Lalb_Chr03g0028501 Lupinus albus HOM05D005413 ORTHO05D006536 1.6e-18 97.4 203 37.4
Sopen11g029620 Solanum pennellii HOM05D005413 ORTHO05D006536 1.6e-18 97.4 214 36.0
HPP92_015644 Vanilla planifolia HOM05D005413 ORTHO05D006536 1.6e-18 97.4 187 38.0
Atru.chr3.3078 Acer truncatum HOM05D005413 ORTHO05D006536 2.1e-18 97.1 261 31.8
Atru.chr3.3087 Acer truncatum HOM05D005413 ORTHO05D006536 2.1e-18 97.1 261 31.8
EL10Ac6g13493 Beta vulgaris HOM05D005413 ORTHO05D006536 2.8e-18 96.7 248 32.7
FAN16G0400 Fragaria x ananassa HOM05D005413 ORTHO05D006536 4.8e-18 95.9 204 33.8
FAN16G2334 Fragaria x ananassa HOM05D005413 ORTHO05D006536 4.8e-18 95.9 204 33.8
Peaxi162Scf00429g00512 Petunia axillaris HOM05D005413 ORTHO05D006536 4.8e-18 95.9 192 36.5
Migut.D02382 Erythranthe guttata HOM05D005413 ORTHO05D006536 6.2e-18 95.5 204 33.8
DCAR_018207 Daucus carota HOM05D005413 ORTHO05D006536 1.1e-17 94.7 203 34.0
PSO339G2181 Papaver somniferum HOM05D005413 ORTHO05D006536 1.8e-17 94.0 127 42.5
PSO384G0849 Papaver somniferum HOM05D005413 ORTHO05D006536 2.4e-17 93.6 214 33.6
MD03G1159500 Malus domestica HOM05D005413 ORTHO05D006536 3.1e-17 93.2 232 33.6
CsaV3_6G038630 Cucumis sativus L. HOM05D005413 ORTHO05D006536 5.3e-17 92.4 262 28.6
ClCG02G022490 Citrullus lanatus HOM05D005413 ORTHO05D006536 1.2e-16 91.3 201 31.3
MELO3C014525.2 Cucumis melo HOM05D005413 ORTHO05D006536 1.2e-16 91.3 262 28.6
Psat7g200680 Pisum sativum HOM05D005413 ORTHO05D006536 1.5e-16 90.9 206 34.5
Prupe.6G147200 Prunus persica HOM05D005413 ORTHO05D006536 2.6e-16 90.1 261 30.3
PGR119G0748 Punica granatum HOM05D005413 ORTHO05D006536 2.6e-16 90.1 208 34.1
VMungo1127G2102 Vigna mungo HOM05D005413 ORTHO05D006536 3.4e-16 89.7 205 35.1
Sed0018758 Sechium edule HOM05D005413 ORTHO05D006536 2.2e-15 87.0 161 34.2
CDE04G1023 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 2.9e-15 86.7 108 43.5
SalBow6G6902 Salvia bowleyana HOM05D005413 ORTHO05D006536 2.9e-15 86.7 149 38.3
BcaC01g06609 Brassica carinata HOM05D005413 ORTHO05D006536 3.8e-15 86.3 143 36.4
BolC3t13687H Brassica oleracea HOM05D005413 ORTHO05D006536 3.8e-15 86.3 143 36.4
CDE07G0886 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 6.4e-15 85.5 201 32.8
Glyma.12G095900 Glycine max HOM05D005413 ORTHO05D006536 3.2e-14 83.2 204 34.3
Thhalv10014324m.g Eutrema salsugineum HOM05D005413 ORTHO05D006536 4.2e-14 82.8 150 36.0
A03p10550 Brassica napus HOM05D005413 ORTHO05D006536 7.1e-14 82.0 143 35.0
BraA03t10367Z Brassica rapa HOM05D005413 ORTHO05D006536 7.1e-14 82.0 143 35.0
SEGI_03865 Sequoiadendron giganteum HOM05D005413 ORTHO05D006536 1.2e-13 81.3 283 31.1
C03p12140 Brassica napus HOM05D005413 ORTHO05D006536 1.6e-13 80.9 143 35.0
Phvul.011G100200 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 1.6e-13 80.9 206 33.0
Lj2C36T10 Lonicera japonica HOM05D005413 ORTHO05D006536 6.0e-13 79.0 173 36.4
Aqoxy1G00612 Aquilegia oxysepala HOM05D005413 ORTHO05D006536 2.3e-12 77.0 206 28.6
vmacro14313 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 8.7e-12 75.1 256 28.9
CARHR191490 Cardamine hirsuta HOM05D005413 ORTHO05D006536 1.9e-11 73.9 132 33.3
Sp6g23150 Schrenkiella parvula HOM05D005413 ORTHO05D006536 3.3e-11 73.2 242 31.0
Dinv33562 Davidia involucrata HOM05D005413 ORTHO05D006536 5.6e-11 72.4 144 33.3
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 5.6e-11 72.4 223 27.8
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 2.1e-10 70.5 146 31.5
Cpa.g.sc33.125 Carica papaya HOM05D005413 ORTHO05D006536 4.8e-10 69.3 81 44.4
Glyma.11G171773 Glycine max HOM05D005413 ORTHO05D006536 4.8e-10 69.3 217 30.9
PGR044G1324 Punica granatum HOM05D003044 ORTHO05D001869 5.3e-09 65.9 69 47.8
Oeu029208.1 Olea europaea HOM05D005413 ORTHO05D006536 6.9e-09 65.5 82 43.9
THA.LOC104810942 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 1.2e-08 64.7 153 29.4
BcaB01g04747 Brassica carinata HOM05D005413 ORTHO05D006536 2.6e-08 63.5 184 31.0
Rhsim01G0199900 Rhododendron simsii HOM05D005413 ORTHO05D006536 4.5e-08 62.8 360 23.6
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 1.3e-07 61.2 99 37.4
FAN21G0466 Fragaria x ananassa HOM05D005413 ORTHO05D006536 2.9e-07 60.1 192 28.6
Rhsim01G0199600 Rhododendron simsii HOM05D005413 ORTHO05D006536 3.8e-07 59.7 310 23.9
THA.LOC104815083 Tarenaya hassleriana HOM05D005413 ORTHO05D006536 3.8e-07 59.7 183 27.9
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 4.9e-07 59.3 124 34.7
Aa31LG1G13390 Aethionema arabicum HOM05D005413 ORTHO05D006536 1.1e-06 58.2 125 29.6


User provided reference genes

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