Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.3e-207 726.1 343 100.0
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.3e-207 726.1 343 100.0
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 4.1e-198 694.5 341 95.0
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 5.0e-196 687.6 341 94.1
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 1.1e-195 686.4 341 94.4
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 2.5e-195 685.3 341 94.1
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 3.6e-194 681.4 341 93.5
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.0e-193 679.9 341 93.0
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 2.3e-193 678.7 337 93.8
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 2.0e-192 675.6 341 92.4
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 9.7e-192 673.3 341 91.8
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.1e-187 659.8 341 90.6
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 5.5e-187 657.5 341 90.3
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 5.5e-187 657.5 337 92.0
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 2.1e-186 655.6 342 89.8
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 2.3e-185 652.1 341 88.9
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 4.0e-185 651.4 342 89.2
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 4.0e-185 651.4 337 89.3
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 4.0e-185 651.4 341 89.7
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 4.0e-185 651.4 341 89.4
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 5.2e-185 651.0 341 88.9
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.2e-184 649.8 337 89.0
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 3.4e-184 648.3 337 89.3
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 7.5e-184 647.1 342 87.7
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 9.8e-184 646.7 341 88.6
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 2.8e-183 645.2 341 88.3
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 6.3e-183 644.0 342 87.7
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 8.3e-183 643.7 341 88.0
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.1e-182 643.3 341 88.6
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.8e-182 642.5 342 88.3
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.8e-182 642.5 342 88.3
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 2.4e-182 642.1 337 89.0
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 2.4e-182 642.1 358 84.9
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.1e-182 641.7 341 88.0
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 4.1e-182 641.3 342 88.3
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.4e-182 641.0 339 88.8
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.2e-181 639.8 342 88.0
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.2e-181 639.8 342 88.0
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 1.6e-181 639.4 342 87.1
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 1.6e-181 639.4 341 87.7
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 2.0e-181 639.0 337 88.1
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 4.5e-181 637.9 337 88.4
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.3e-180 636.3 336 88.7
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 2.3e-180 635.6 341 88.6
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.0e-180 634.4 336 88.7
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 4.2e-179 631.3 342 86.5
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 5.5e-179 630.9 363 82.9
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 7.2e-179 630.6 342 86.8
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 9.5e-179 630.2 339 87.9
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 5.2e-177 624.4 342 85.1
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 1.5e-176 622.9 342 85.1
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.6e-176 622.1 341 85.9
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 5.7e-176 620.9 342 83.9
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 9.8e-176 620.2 346 82.7
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 2.8e-175 618.6 342 84.5
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 6.3e-175 617.5 337 86.4
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 1.4e-174 616.3 341 83.3
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 1.4e-174 616.3 341 82.1
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 2.4e-174 615.5 341 83.0
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 2.4e-174 615.5 341 83.0
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 4.1e-174 614.8 341 83.0
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 2.0e-173 612.5 338 84.6
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 5.9e-173 610.9 337 85.2
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 7.8e-173 610.5 323 89.2
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 7.8e-173 610.5 342 83.9
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 2.9e-172 608.6 341 83.9
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.1e-171 606.7 342 83.3
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 1.5e-171 606.3 300 94.0
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 2.5e-171 605.5 342 81.9
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 7.3e-171 604.0 338 83.7
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 2.8e-170 602.1 339 84.1
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.8e-169 599.4 339 82.3
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 5.2e-169 597.8 334 83.2
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 6.8e-169 597.4 342 82.7
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.2e-168 596.7 341 80.9
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 1.5e-168 596.3 341 80.9
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 2.6e-168 595.5 341 80.9
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 3.4e-168 595.1 341 80.6
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 3.4e-168 595.1 339 81.7
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 3.4e-168 595.1 300 92.0
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 2.2e-167 592.4 341 80.6
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 8.3e-167 590.5 300 91.3
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 5.4e-166 587.8 346 78.3
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 2.0e-165 585.9 338 81.1
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.0e-164 583.6 342 81.3
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.7e-164 582.8 341 79.2
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 2.3e-164 582.4 341 79.5
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 2.3e-164 582.4 342 81.0
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 1.1e-163 580.1 368 75.0
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.9e-163 579.3 342 78.9
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.5e-163 578.9 341 79.8
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 1.4e-161 573.2 346 77.2
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 3.2e-158 562.0 346 75.4
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.9e-155 552.7 341 76.0
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 3.1e-153 545.4 360 72.2
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.2e-152 543.5 342 77.2
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.2e-152 543.5 297 84.5
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 1.9e-150 536.2 339 76.4
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 3.5e-149 531.9 297 84.5
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.1e-146 522.7 293 82.3
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 7.1e-142 507.7 277 83.8
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.7e-140 503.1 341 70.4
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 8.7e-140 500.7 341 67.2
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 3.6e-138 495.4 344 66.0
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.4e-137 492.7 341 66.9
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 9.3e-134 480.7 347 64.8
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 6.0e-133 478.0 339 64.3
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 6.2e-130 468.0 342 68.4
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 8.1e-130 467.6 353 61.5
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 6.9e-129 464.5 274 79.6
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 9.6e-115 417.5 345 55.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 1.3e-82 310.8 355 42.3
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.3e-81 305.4 172 84.3
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 1.5e-67 260.8 379 36.9
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.7e-55 220.7 110 91.8
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.7e-55 220.7 110 91.8
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.9e-55 219.5 110 90.9
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 6.8e-52 208.8 163 61.3
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.7e-42 177.6 106 79.2
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 8.4e-10 68.9 40 80.0
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 3.9e-07 60.1 50 56.0


User provided reference genes

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