Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10406_v3 Cicer arietinum L. HOM05D006492 ORTHO05D008432 0.0e+00 1791.5 930 100.0
TPR.G13408 Trifolium pratense HOM05D006492 ORTHO05D008432 0.0e+00 1473.8 930 82.9
Medtr1g090050 Medicago truncatula HOM05D006492 ORTHO05D008432 0.0e+00 1444.5 930 81.6
Psat6g170280 Pisum sativum HOM05D006492 ORTHO05D008432 0.0e+00 1439.9 931 80.9
Glyma.10G192800 Glycine max HOM05D006492 ORTHO05D008432 0.0e+00 1270.0 931 71.8
Lj5g0018955 Lotus japonicus HOM05D006492 ORTHO05D008432 0.0e+00 1258.8 916 73.6
Glyma.20G197700 Glycine max HOM05D006492 ORTHO05D008432 0.0e+00 1236.9 917 70.8
Phvul.007G134600 Phaseolus vulgaris HOM05D006492 ORTHO05D008432 0.0e+00 1216.1 927 68.9
arahy.Tifrunner.gnm1.ann1.TP3X9S Arachis hypogaea HOM05D006492 ORTHO05D008432 0.0e+00 1210.3 919 68.9
VMungo0720G0701 Vigna mungo HOM05D006492 ORTHO05D008432 0.0e+00 1208.0 926 68.5
Lalb_Chr21g0312661 Lupinus albus HOM05D006492 ORTHO05D008432 0.0e+00 1196.4 920 68.4
Cfa014875 Carpinus fangiana HOM05D006492 ORTHO05D008432 8.6e-267 924.1 927 53.4
Haze_11549 Corylus avellana HOM05D006492 ORTHO05D008432 7.3e-266 921.0 925 53.3
Dinv38285 Davidia involucrata HOM05D006492 ORTHO05D008432 3.2e-261 905.6 926 51.6
QL05p063769 Quercus lobata HOM05D006492 ORTHO05D008432 3.0e-259 899.0 925 52.8
Potri.003G175300 Populus trichocarpa HOM05D006492 ORTHO05D008432 2.7e-252 875.9 925 52.5
Gorai.006G055600 Gossypium raimondii HOM05D006492 ORTHO05D008432 1.5e-247 860.1 927 50.9
Gohir.D09G053008 Gossypium hirsutum HOM05D006492 ORTHO05D008432 2.6e-247 859.4 927 50.8
CiPaw.01G204100 Carya illinoinensis HOM05D006492 ORTHO05D008432 3.4e-247 859.0 926 50.9
Duzib212G0418 Durio zibethinus HOM05D006492 ORTHO05D008432 1.7e-246 856.7 926 51.0
Potri.001G053000 Populus trichocarpa HOM05D006492 ORTHO05D008432 1.7e-246 856.7 926 51.2
Prupe.1G060300 Prunus persica HOM05D006492 ORTHO05D008432 3.2e-245 852.4 925 50.4
Thecc.04G212600 Theobroma cacao HOM05D006492 ORTHO05D008432 9.2e-245 850.9 916 50.3
Manes.15G049000 Manihot esculenta HOM05D006492 ORTHO05D008432 1.0e-243 847.4 927 50.4
MD00G1101100 Malus domestica HOM05D006492 ORTHO05D008432 1.3e-243 847.0 927 50.5
Ciclev10004244m.g Citrus clementina HOM05D006492 ORTHO05D008432 3.3e-242 842.4 926 50.2
CSS0015325 Camellia sinensis var. sinensis HOM05D006492 ORTHO05D008432 5.6e-242 841.6 890 50.7
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 1.1e-240 837.4 931 50.5
GSVIVG01029042001 Vitis vinifera HOM05D006492 ORTHO05D008432 9.9e-239 830.9 930 49.0
TAR365G0557 Trochodendron aralioides HOM05D006492 ORTHO05D008432 6.4e-238 828.2 932 49.5
TAR365G0379 Trochodendron aralioides HOM05D006492 ORTHO05D008432 2.7e-236 822.8 932 49.2
Actinidia25080 Actinidia chinensis HOM05D006492 ORTHO05D008432 3.0e-235 819.3 925 49.6
COL.COLO4_34090 Corchorus olitorius HOM05D006492 ORTHO05D008432 4.8e-233 812.0 926 48.4
RcHm_v2.0_Chr4g0396881 Rosa chinensis HOM05D006492 ORTHO05D008432 1.3e-230 803.9 927 48.7
TWI09G1643 Tripterygium wilfordii HOM05D006492 ORTHO05D008432 3.8e-230 802.4 967 47.8
FAN12G2087 Fragaria x ananassa HOM05D006492 ORTHO05D008432 4.2e-229 798.9 930 48.8
FAN22G2187 Fragaria x ananassa HOM05D006492 ORTHO05D008432 2.8e-225 786.2 930 48.4
FAN07G0933 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.1e-224 784.3 930 48.4
vmacro00516 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 5.3e-224 781.9 943 46.6
CANSAT78G0108 Cannabis sativa HOM05D006492 ORTHO05D008432 2.6e-223 779.6 935 48.1
Rhsim09G0049200 Rhododendron simsii HOM05D006492 ORTHO05D008432 2.7e-220 769.6 969 45.0
Cpa.g.sc59.86 Carica papaya HOM05D006492 ORTHO05D008432 3.3e-218 762.7 853 49.4
EL10Ac3g06781 Beta vulgaris HOM05D006492 ORTHO05D008432 3.1e-216 756.1 927 46.3
Lju414A5T31 Lonicera japonica HOM05D006492 ORTHO05D008432 4.5e-215 752.3 852 48.8
ClCG05G003620 Citrullus lanatus HOM05D006492 ORTHO05D008432 2.9e-214 749.6 921 44.7
FAN17G1964 Fragaria x ananassa HOM05D006492 ORTHO05D008432 4.9e-214 748.8 932 47.0
MSTRG.24638 Avicennia marina HOM05D006492 ORTHO05D008432 1.4e-213 747.3 922 45.0
Peaxi162Scf00047g01324 Petunia axillaris HOM05D006492 ORTHO05D008432 2.7e-212 743.0 925 44.2
Cc03_g07180 Coffea canephora HOM05D006492 ORTHO05D008432 6.7e-211 738.4 933 44.1
Hund24849 Selenicereus undatus HOM05D006492 ORTHO05D008432 1.1e-210 737.6 928 45.4
AUR62035934 Chenopodium quinoa HOM05D006492 ORTHO05D008432 2.2e-209 733.4 929 44.8
Nitab4.5_0012325g0010 Nicotiana tabacum HOM05D006492 ORTHO05D008432 3.1e-208 729.6 925 43.7
Migut.N00332 Erythranthe guttata HOM05D006492 ORTHO05D008432 4.1e-208 729.2 931 44.4
Eucgr.H00098 Eucalyptus grandis HOM05D006492 ORTHO05D008432 2.0e-207 726.9 921 46.0
Nn1g03104 Nelumbo nucifera HOM05D006492 ORTHO05D008432 2.6e-207 726.5 928 44.5
MBI10_g16832_MAGBIO Magnolia biondii HOM05D006492 ORTHO05D008432 4.5e-207 725.7 885 47.0
Nitab4.5_0000493g0030 Nicotiana tabacum HOM05D006492 ORTHO05D008432 1.9e-205 720.3 939 43.1
CsaV3_3G011330 Cucumis sativus L. HOM05D006492 ORTHO05D008432 2.5e-205 719.9 910 44.6
Sc14g0004710 Simmondsia chinensis HOM05D006492 ORTHO05D008432 2.5e-205 719.9 924 45.6
PGR142G2376 Punica granatum HOM05D006492 ORTHO05D008432 4.2e-205 719.2 924 44.0
Sed0001454 Sechium edule HOM05D006492 ORTHO05D008432 6.7e-203 711.8 910 45.1
SGA_v2.0_scaffold2G00843 Striga asiatica HOM05D006492 ORTHO05D008432 2.5e-202 709.9 926 43.8
Sopen09g034300 Solanum pennellii HOM05D006492 ORTHO05D008432 4.3e-202 709.1 927 42.1
Oeu051651.1 Olea europaea HOM05D006492 ORTHO05D008432 1.3e-201 707.6 786 48.3
Ah.04g153340 Amaranthus hybridus HOM05D006492 ORTHO05D008432 3.7e-201 706.1 932 43.2
THA.LOC104816017 Tarenaya hassleriana HOM05D006492 ORTHO05D008432 2.2e-198 696.8 925 43.2
SalBow3G2597 Salvia bowleyana HOM05D006492 ORTHO05D008432 3.9e-195 686.0 941 43.0
CAN.G1552.5 Capsicum annuum HOM05D006492 ORTHO05D008432 4.4e-194 682.6 884 42.3
ECA233G5226 Erigeron canadensis HOM05D006492 ORTHO05D008432 5.7e-194 682.2 916 42.1
HanXRQChr07g0185861 Helianthus annuus HOM05D006492 ORTHO05D008432 7.4e-194 681.8 912 41.6
Aqoxy2G03837 Aquilegia oxysepala HOM05D006492 ORTHO05D008432 9.7e-194 681.4 940 43.5
DCAR_002278 Daucus carota HOM05D006492 ORTHO05D008432 4.1e-192 676.0 916 42.1
CARHR004030 Cardamine hirsuta HOM05D006492 ORTHO05D008432 1.0e-187 661.4 925 40.9
AL1G14360 Arabidopsis lyrata HOM05D006492 ORTHO05D008432 1.8e-187 660.6 927 40.6
BolC8t46943H Brassica oleracea HOM05D006492 ORTHO05D008432 1.8e-187 660.6 935 41.1
C08p01350 Brassica napus HOM05D006492 ORTHO05D008432 5.2e-187 659.1 935 41.1
Sp1g03490 Schrenkiella parvula HOM05D006492 ORTHO05D008432 1.5e-186 657.5 921 41.7
AT1G04650 Arabidopsis thaliana HOM05D006492 ORTHO05D008432 4.1e-184 649.4 927 40.6
Carub.0001s0390 Capsella rubella HOM05D006492 ORTHO05D008432 9.1e-184 648.3 927 40.5
MELO3C006341.2 Cucumis melo HOM05D006492 ORTHO05D008432 1.2e-183 647.9 819 44.0
BraA08t35581Z Brassica rapa HOM05D006492 ORTHO05D008432 2.6e-183 646.7 934 40.9
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 3.5e-183 646.4 934 41.1
A10p03080 Brassica napus HOM05D006492 ORTHO05D008432 7.7e-183 645.2 925 40.9
BcaC07g36892 Brassica carinata HOM05D006492 ORTHO05D008432 6.5e-182 642.1 932 41.2
Thhalv10006668m.g Eutrema salsugineum HOM05D006492 ORTHO05D008432 1.1e-181 641.3 951 39.6
Atru.chr4.1802 Acer truncatum HOM05D006492 ORTHO05D008432 7.5e-178 628.6 677 50.8
unitig_899.g15531 Utricularia gibba HOM05D006492 ORTHO05D008432 1.7e-174 617.5 884 40.4
Lsat_1_v5_gn_6_62680 Lactuca sativa HOM05D006492 ORTHO05D008432 3.8e-174 616.3 920 39.5
Aa31LG1G20220 Aethionema arabicum HOM05D006492 ORTHO05D008432 3.6e-172 609.8 932 39.4
ATR0787G047 Amborella trichopoda HOM05D006492 ORTHO05D008432 4.7e-172 609.4 936 39.9
PSO017G3024 Papaver somniferum HOM05D006492 ORTHO05D008432 8.3e-161 572.0 970 38.7
CDE04G0311 Ceratophyllum demersum HOM05D006492 ORTHO05D008432 1.3e-158 564.7 851 37.8
PSO063G2396 Papaver somniferum HOM05D006492 ORTHO05D008432 6.6e-158 562.4 966 38.4
FvH4_4g05680 Fragaria vesca HOM05D006492 ORTHO05D008432 1.7e-153 547.7 614 49.7
SHI00019 Sapria himalayana HOM05D006492 ORTHO05D000009 8.6e-150 535.4 892 37.7
Zm00001eb003580 Zea mays HOM05D006492 ORTHO05D008432 4.7e-148 529.6 929 34.8
vmacro22821 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 5.8e-146 522.7 941 37.0
Os03g0144000 Oryza sativa ssp. japonica HOM05D006492 ORTHO05D008432 3.2e-136 490.3 949 34.7
Solyc09g091370.4 Solanum lycopersicum HOM05D006492 ORTHO05D008432 2.8e-124 450.7 584 42.8
SEGI_21616 Sequoiadendron giganteum HOM05D006492 ORTHO05D008432 1.1e-120 438.7 894 32.9
BraA10t42581Z Brassica rapa HOM05D006492 ORTHO05D008432 3.6e-116 423.7 570 41.1
arahy.Tifrunner.gnm1.ann1.LCJ3P1 Arachis hypogaea HOM05D006492 ORTHO05D008432 2.7e-58 231.5 218 57.8
Pp3c16_18660 Physcomitrium patens HOM05D006492 ORTHO05D008432 3.0e-54 218.0 878 23.6
SMO117G0361 Selaginella moellendorffii HOM05D006492 ORTHO05D008432 4.2e-48 197.6 680 26.8
HPP92_025560 Vanilla planifolia HOM05D006492 ORTHO05D008432 5.7e-45 187.2 329 35.6
HPP92_025559 Vanilla planifolia HOM05D006492 ORTHO05D008432 1.7e-44 185.7 331 36.3
Mapoly0061s0085 Marchantia polymorpha HOM05D006492 ORTHO05D008432 1.2e-37 162.9 454 29.5
AagrBONN_evm.TU.Sc2ySwM_117.2272 Anthoceros agrestis HOM05D006492 ORTHO05D008432 2.3e-25 122.1 526 24.9
CBR_g61877 Chara braunii HOM05D006492 ORTHO05D008432 1.2e-21 109.8 859 21.0
C05p02850 Brassica napus HOM05D006492 ORTHO05D008432 5.1e-17 94.4 136 39.0
Atru.chr4.1801 Acer truncatum HOM05D006492 ORTHO05D008432 2.5e-08 65.5 90 45.6
Lju414A5G29 Lonicera japonica HOM05D006492 ORTHO05D008432 2.5e-08 65.5 90 46.7
C05p02840 Brassica napus HOM05D006492 ORTHO05D008432 8.1e-07 60.5 119 28.6


User provided reference genes

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