Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 8.3e-49 196.8 107 100.0
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 9.9e-42 173.3 107 86.9
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 6.4e-41 170.6 107 84.1
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 1.2e-39 166.4 107 85.0
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 1.3e-38 162.9 107 82.2
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 1.1e-37 159.8 105 81.0
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 3.3e-37 158.3 107 81.3
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 2.1e-36 155.6 107 79.4
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 3.6e-36 154.8 105 78.1
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 3.6e-36 154.8 105 78.1
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 1.4e-35 152.9 107 76.6
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 5.8e-34 147.5 105 76.2
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 7.6e-34 147.1 105 78.1
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 4.9e-33 144.4 103 74.8
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 4.9e-33 144.4 105 77.1
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 6.4e-33 144.1 107 76.6
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 1.1e-32 143.3 101 78.2
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 1.1e-32 143.3 101 77.2
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 1.4e-32 142.9 101 78.2
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 1.9e-32 142.5 107 74.8
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.9e-32 142.5 107 75.7
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 2.4e-32 142.1 105 74.3
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 4.2e-32 141.4 103 75.7
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 1.2e-31 139.8 105 71.4
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 1.6e-31 139.4 105 73.3
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 2.1e-31 139.0 105 73.3
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 3.5e-31 138.3 105 72.4
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 6.0e-31 137.5 105 73.3
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 6.0e-31 137.5 105 73.3
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 7.8e-31 137.1 105 73.3
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 1.0e-30 136.7 102 72.5
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 1.0e-30 136.7 101 74.3
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 1.3e-30 136.3 85 84.7
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.3e-30 136.3 102 72.5
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 1.7e-30 136.0 101 73.3
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.7e-30 136.0 105 72.4
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.7e-30 136.0 105 73.3
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 2.3e-30 135.6 99 74.7
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 3.0e-30 135.2 105 69.5
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 3.9e-30 134.8 101 71.3
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 3.9e-30 134.8 105 71.4
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 5.1e-30 134.4 107 69.2
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 5.1e-30 134.4 107 68.2
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 6.6e-30 134.0 105 68.6
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 6.6e-30 134.0 103 71.8
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 8.7e-30 133.7 105 71.4
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 8.7e-30 133.7 102 70.6
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 1.5e-29 132.9 102 70.6
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 1.9e-29 132.5 103 70.9
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 1.9e-29 132.5 107 68.2
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.9e-29 132.5 107 67.3
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 1.9e-29 132.5 101 71.3
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 1.9e-29 132.5 100 72.0
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 2.5e-29 132.1 101 69.3
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.5e-29 132.1 102 69.6
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 2.5e-29 132.1 102 69.6
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 3.3e-29 131.7 101 72.3
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 4.3e-29 131.3 100 70.0
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 4.3e-29 131.3 102 68.6
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 9.6e-29 130.2 102 68.6
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 1.3e-28 129.8 99 69.7
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 1.3e-28 129.8 95 71.6
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 1.6e-28 129.4 103 67.0
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 2.1e-28 129.0 105 68.6
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 2.1e-28 129.0 101 68.3
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 2.8e-28 128.6 103 67.0
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 2.8e-28 128.6 103 67.0
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 2.8e-28 128.6 103 67.0
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 3.6e-28 128.3 103 66.0
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 3.6e-28 128.3 105 67.6
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 6.2e-28 127.5 101 67.3
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 6.2e-28 127.5 101 67.3
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 8.1e-28 127.1 103 66.0
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 1.1e-27 126.7 101 67.3
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 1.4e-27 126.3 101 66.3
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 2.4e-27 125.6 118 61.9
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 3.1e-27 125.2 104 64.4
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 3.1e-27 125.2 104 64.4
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 3.1e-27 125.2 104 64.4
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 3.1e-27 125.2 104 64.4
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 3.1e-27 125.2 102 64.7
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 5.3e-27 124.4 103 65.0
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 6.9e-27 124.0 104 63.5
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 1.5e-26 122.9 104 63.5
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 2.6e-26 122.1 104 65.4
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 2.6e-26 122.1 104 64.4
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 2.6e-26 122.1 104 63.5
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 5.8e-26 120.9 104 63.5
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 5.8e-26 120.9 101 62.4
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 9.9e-26 120.2 104 63.5
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 1.3e-25 119.8 105 60.0
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 1.7e-25 119.4 102 63.7
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 4.9e-25 117.9 102 61.8
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 1.1e-24 116.7 81 79.0
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 1.9e-24 115.9 102 62.7
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 1.9e-24 115.9 99 64.6
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 1.6e-23 112.8 102 62.7
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 1.0e-22 110.2 156 49.4
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 1.3e-22 109.8 103 56.3
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 3.0e-22 108.6 102 60.8
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 3.0e-22 108.6 81 76.5
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 3.0e-22 108.6 101 57.4
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 3.9e-22 108.2 101 56.4
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 6.7e-22 107.5 79 75.9
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 2.5e-21 105.5 75 74.7
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 3.3e-21 105.1 105 60.0
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 4.3e-21 104.8 99 58.6
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.1e-20 102.4 85 65.9
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 4.8e-20 101.3 77 71.4
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 6.2e-20 100.9 79 67.1
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 1.1e-19 100.1 79 68.4
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.4e-19 99.8 83 65.1
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 1.4e-19 99.8 99 55.6
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 9.0e-19 97.1 82 65.9
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 3.4e-18 95.1 180 38.3
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 4.9e-17 91.3 76 63.2
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 4.2e-16 88.2 79 64.6
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 1.0e-14 83.6 75 61.3
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 1.9e-13 79.3 89 49.4
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 6.2e-12 74.3 94 45.7
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 6.2e-12 74.3 53 75.5
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 1.4e-11 73.2 96 44.8
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 4.2e-08 61.6 53 58.5
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 4.2e-08 61.6 53 58.5
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 2.7e-07 58.9 50 56.0
PSO832G3862 Papaver somniferum HOM05D001297 ORTHO05D001135 1.8e-06 56.2 77 46.8


User provided reference genes

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