Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10310_v3 Cicer arietinum L. HOM05D000245 ORTHO05D000020 5.9e-26 120.2 64 100.0
Ca_10316_v3 Cicer arietinum L. HOM05D000245 ORTHO05D000020 3.6e-23 110.9 62 98.4
Medtr1g087920 Medicago truncatula HOM05D000245 ORTHO05D000020 8.0e-15 83.2 62 72.6
Psat6g163880 Pisum sativum HOM05D000245 ORTHO05D000020 1.2e-13 79.3 61 72.1
Glyma.10G016500 Glycine max HOM05D000245 ORTHO05D000020 1.5e-13 79.0 61 65.6
Glyma.02G016100 Glycine max HOM05D000245 ORTHO05D000020 7.5e-13 76.6 61 63.9
Lj5g0022230 Lotus japonicus HOM05D000245 ORTHO05D000020 4.9e-12 73.9 58 65.5
Lalb_Chr06g0166561 Lupinus albus HOM05D000245 ORTHO05D000020 1.3e-09 65.9 41 78.0
Lj1g0007199 Lotus japonicus HOM05D000245 ORTHO05D000020 3.9e-09 64.3 40 70.0
VMungo0720G1171 Vigna mungo HOM05D000245 ORTHO05D000020 1.9e-08 62.0 46 65.2
arahy.Tifrunner.gnm1.ann1.GP7L65 Arachis hypogaea HOM05D000245 ORTHO05D000020 4.3e-08 60.8 39 66.7
arahy.Tifrunner.gnm1.ann1.DRB5KP Arachis hypogaea HOM05D000245 ORTHO05D000020 7.3e-08 60.1 39 66.7
Lalb_Chr21g0309321 Lupinus albus HOM05D000245 ORTHO05D000020 1.2e-07 59.3 41 68.3
Phvul.007G217800 Phaseolus vulgaris HOM05D000245 ORTHO05D000020 1.6e-07 58.9 61 57.4
CsaV3_4G000990 Cucumis sativus L. HOM05D000245 ORTHO05D000020 4.0e-06 54.3 28 78.6
Nn4g25739 Nelumbo nucifera HOM05D000245 ORTHO05D000020 5.2e-06 53.9 38 63.2
Gohir.A08G118100 Gossypium hirsutum HOM05D000245 ORTHO05D000020 6.8e-06 53.5 28 71.4
Gorai.004G142800 Gossypium raimondii HOM05D000245 ORTHO05D000020 6.8e-06 53.5 28 71.4
PSO407G0293 Papaver somniferum HOM05D000245 ORTHO05D000020 6.8e-06 53.5 34 76.5
Thecc.01G305400 Theobroma cacao HOM05D000245 ORTHO05D000020 6.8e-06 53.5 44 56.8
COL.COLO4_23308 Corchorus olitorius HOM05D000245 ORTHO05D000020 8.9e-06 53.1 44 59.1
MELO3C017940.2 Cucumis melo HOM05D000245 ORTHO05D000020 8.9e-06 53.1 46 56.5
TWI14G1013 Tripterygium wilfordii HOM05D000245 ORTHO05D000020 8.9e-06 53.1 38 63.2


User provided reference genes

Program Settings