Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 4.1e-90 334.7 173 100.0
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 5.6e-71 271.2 187 74.9
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 2.0e-68 262.7 188 75.0
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 8.7e-56 220.7 193 61.1
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 8.7e-56 220.7 190 62.1
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 5.3e-53 211.5 185 62.2
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 6.9e-53 211.1 190 58.9
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 2.0e-52 209.5 180 62.2
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 7.1e-50 201.1 194 59.3
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 1.5e-44 183.3 186 60.2
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 2.0e-44 183.0 186 53.2
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 7.7e-44 181.0 189 53.4
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 5.0e-43 178.3 183 54.6
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 8.5e-43 177.6 185 55.1
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 3.2e-42 175.6 169 56.8
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 7.2e-42 174.5 179 55.3
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 8.8e-40 167.5 181 54.1
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 2.5e-39 166.0 194 51.5
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 4.3e-39 165.2 190 52.1
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 7.4e-39 164.5 184 50.5
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 2.2e-38 162.9 161 52.8
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 4.8e-38 161.8 187 51.3
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 4.8e-38 161.8 187 51.9
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.8e-37 159.8 188 51.1
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 1.8e-37 159.8 159 51.6
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 3.1e-37 159.1 187 50.3
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 6.9e-37 157.9 188 50.0
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 6.9e-37 157.9 177 51.4
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 9.1e-37 157.5 178 50.0
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 2.0e-36 156.4 174 53.4
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 2.6e-36 156.0 185 47.0
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.6e-36 156.0 178 50.6
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 4.5e-36 155.2 177 50.8
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.7e-35 153.3 196 45.9
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 2.9e-35 152.5 185 50.3
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 5.0e-35 151.8 176 49.4
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 6.5e-35 151.4 180 46.1
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.5e-35 151.4 176 50.0
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 8.5e-35 151.0 200 44.5
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 1.1e-34 150.6 172 51.2
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.1e-34 150.6 179 49.7
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 2.5e-34 149.4 184 50.5
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 2.5e-34 149.4 205 44.4
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 3.2e-34 149.1 177 49.2
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 3.2e-34 149.1 171 50.3
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 4.2e-34 148.7 197 46.7
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 4.2e-34 148.7 197 46.7
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 4.2e-34 148.7 197 46.7
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 4.2e-34 148.7 188 43.1
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 4.2e-34 148.7 179 52.5
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 5.5e-34 148.3 182 45.6
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 5.5e-34 148.3 193 47.7
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 9.4e-34 147.5 177 53.1
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 9.4e-34 147.5 189 48.7
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 1.6e-33 146.7 164 50.0
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 2.1e-33 146.4 171 49.7
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 2.1e-33 146.4 169 47.3
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 2.7e-33 146.0 167 50.3
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.6e-33 145.6 178 48.9
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 3.6e-33 145.6 180 47.2
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 3.6e-33 145.6 179 52.0
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 4.7e-33 145.2 189 50.8
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 4.7e-33 145.2 193 47.7
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 6.1e-33 144.8 170 48.8
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 7.9e-33 144.4 180 47.8
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 7.9e-33 144.4 180 47.8
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 7.9e-33 144.4 166 48.8
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 7.9e-33 144.4 175 53.1
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 1.4e-32 143.7 184 51.1
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 2.3e-32 142.9 191 47.1
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 2.3e-32 142.9 172 47.1
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.0e-32 142.5 178 48.3
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 3.0e-32 142.5 178 46.1
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 3.0e-32 142.5 166 49.4
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 3.9e-32 142.1 192 45.3
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 6.7e-32 141.4 178 48.3
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 8.8e-32 141.0 181 45.3
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.0e-31 139.8 190 51.6
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 4.4e-31 138.7 176 48.3
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 5.7e-31 138.3 171 47.4
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 5.7e-31 138.3 187 46.0
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 5.7e-31 138.3 163 48.5
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 9.7e-31 137.5 164 49.4
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 9.7e-31 137.5 196 44.4
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 1.3e-30 137.1 167 48.5
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 1.3e-30 137.1 175 48.0
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 1.3e-30 137.1 163 51.5
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 2.2e-30 136.3 190 45.3
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 3.7e-30 135.6 176 47.2
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 3.7e-30 135.6 176 47.2
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 4.8e-30 135.2 177 47.5
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 4.8e-30 135.2 177 47.5
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 4.8e-30 135.2 175 46.3
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 6.3e-30 134.8 181 47.0
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 8.2e-30 134.4 179 45.8
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.2e-30 134.4 179 48.0
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 1.4e-29 133.7 169 48.5
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 1.8e-29 133.3 182 45.6
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 2.4e-29 132.9 183 47.5
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 4.1e-29 132.1 170 48.8
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.1e-29 132.1 173 45.7
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 4.1e-29 132.1 173 45.7
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 4.1e-29 132.1 164 46.3
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.2e-28 130.6 170 49.4
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 2.0e-28 129.8 173 48.6
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 3.5e-28 129.0 177 45.2
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 4.5e-28 128.6 176 43.2
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 4.5e-28 128.6 176 43.2
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 4.5e-28 128.6 176 43.2
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 4.5e-28 128.6 176 43.2
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 7.7e-28 127.9 167 46.7
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 7.7e-28 127.9 176 46.0
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 1.0e-27 127.5 176 43.2
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 1.0e-27 127.5 173 43.9
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 1.3e-27 127.1 177 42.9
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.2e-27 126.3 171 45.0
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 2.9e-27 125.9 166 47.6
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 2.9e-27 125.9 180 42.8
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 2.9e-27 125.9 171 42.1
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.5e-26 123.6 174 43.7
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 1.9e-26 123.2 165 44.2
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.5e-26 122.9 190 42.6
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 9.4e-26 120.9 169 47.3
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 9.4e-26 120.9 170 45.3
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 1.2e-25 120.6 204 47.1
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 2.1e-25 119.8 172 47.7
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.7e-25 118.6 159 45.3
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 6.1e-25 118.2 174 42.0
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 8.0e-25 117.9 179 44.7
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 1.0e-24 117.5 168 42.3
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.0e-24 117.5 169 43.8
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 1.0e-24 117.5 172 41.3
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 1.8e-24 116.7 158 44.9
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 5.2e-24 115.2 168 46.4
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 6.7e-24 114.8 167 43.7
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 1.1e-23 114.0 167 41.9
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.0e-23 113.2 138 47.8
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 2.0e-23 113.2 172 40.7
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.5e-23 111.3 162 42.6
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 2.2e-22 109.8 168 41.1
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 1.1e-21 107.5 221 35.3
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 1.2e-20 104.0 171 41.5
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 4.5e-20 102.1 148 44.6
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 1.3e-19 100.5 203 35.5
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 2.2e-19 99.8 158 39.9
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 3.8e-19 99.0 156 41.7
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.5e-18 97.1 169 40.8
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 5.5e-18 95.1 130 41.5
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 5.5e-18 95.1 176 35.2
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 9.4e-18 94.4 156 41.0
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.1e-17 93.2 142 42.3
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 4.7e-17 92.0 162 38.9
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 6.1e-17 91.7 162 40.7
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 7.5e-15 84.7 210 33.3
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.7e-14 83.6 105 47.6
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 6.3e-14 81.6 132 35.6
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.1e-13 79.3 97 46.4
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 5.4e-13 78.6 196 34.2
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 3.5e-12 75.9 165 37.0
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.0e-11 74.3 98 45.9
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 1.3e-11 73.9 177 36.2
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.7e-11 73.6 136 39.7
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.5e-11 71.6 97 45.4
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.5e-11 71.2 102 44.1
Nn6g33912 Nelumbo nucifera HOM05D003790 ORTHO05D004481 1.9e-10 70.1 63 54.0
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 2.7e-09 66.2 212 31.1
SEGI_22681 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 8.0e-09 64.7 200 27.0
Sc17g0000580 Simmondsia chinensis HOM05D003790 ORTHO05D004481 1.8e-08 63.5 136 37.5
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.3e-08 63.2 79 45.6
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 4.0e-08 62.4 104 38.5
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 2.0e-07 60.1 165 32.1
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 2.6e-07 59.7 173 28.9
CsaV3_4G001110 Cucumis sativus L. HOM05D003790 ORTHO05D044967 1.3e-06 57.4 165 27.9
Zm00001eb396420 Zea mays HOM05D003790 ORTHO05D004481 1.7e-06 57.0 211 33.6
MELO3C017926.2 Cucumis melo HOM05D003790 ORTHO05D044967 3.7e-06 55.8 147 27.2
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.9e-06 55.5 47 61.7
GSVIVG01032948001 Vitis vinifera HOM05D001131 ORTHO05D000972 4.9e-06 55.5 198 26.8
Aqoxy5G02997 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 6.3e-06 55.1 196 26.5
MBI07_g42010_MAGBIO Magnolia biondii HOM05D001131 ORTHO05D000972 6.3e-06 55.1 193 24.9
SEGI_15713 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 8.3e-06 54.7 208 27.4


User provided reference genes

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