Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10271_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 3.9e-93 344.7 168 100.0
TPR.G31753 Trifolium pratense HOM05D000886 ORTHO05D000525 1.9e-47 193.0 209 51.7
Psat6g160280 Pisum sativum HOM05D000886 ORTHO05D000525 1.2e-38 163.7 202 47.0
Ca_10270_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 2.3e-37 159.5 194 49.0
TPR.G39393 Trifolium pratense HOM05D000886 ORTHO05D000525 2.6e-36 156.0 193 46.6
TPR.G38597 Trifolium pratense HOM05D000886 ORTHO05D000525 9.7e-36 154.1 199 44.2
TPR.G38682 Trifolium pratense HOM05D000886 ORTHO05D000525 1.3e-35 153.7 200 45.5
TPR.G20610 Trifolium pratense HOM05D002442 ORTHO05D002670 2.0e-33 146.4 212 42.0
TPR.G40213 Trifolium pratense HOM05D000886 ORTHO05D000525 2.7e-33 146.0 110 63.6
Phvul.007G212800 Phaseolus vulgaris HOM05D000886 ORTHO05D000525 5.0e-32 141.7 191 43.5
TPR.G10171 Trifolium pratense HOM05D000886 ORTHO05D000525 6.1e-30 134.8 115 59.1
Psat0s3390g0040 Pisum sativum HOM05D033518 ORTHO05D000525 2.3e-29 132.9 89 67.4
Lj5g0012682 Lotus japonicus HOM05D000886 ORTHO05D000525 4.4e-28 128.6 195 40.5
COL.COLO4_23200 Corchorus olitorius HOM05D000886 ORTHO05D000525 2.8e-19 99.4 114 43.9
Thecc.01G317100 Theobroma cacao HOM05D000886 ORTHO05D000525 4.9e-19 98.6 107 49.5
BcaC07g40717 Brassica carinata HOM05D000886 ORTHO05D000525 5.6e-15 85.1 192 31.8
BcaC07g42747 Brassica carinata HOM05D000886 ORTHO05D000525 5.6e-15 85.1 188 33.5
VMungo0720G0442 Vigna mungo HOM05D033518 ORTHO05D000525 1.4e-13 80.5 107 44.9
Thhalv10006447m.g Eutrema salsugineum HOM05D000886 ORTHO05D000525 1.5e-12 77.0 109 42.2
TPR.G31756 Trifolium pratense HOM05D000886 ORTHO05D000525 1.5e-12 77.0 140 38.6
VMungo0720G2915 Vigna mungo HOM05D033518 ORTHO05D000525 5.7e-12 75.1 106 41.5
BcaC08g45191 Brassica carinata HOM05D000886 ORTHO05D000525 7.5e-12 74.7 168 31.5
Nn3g21760 Nelumbo nucifera HOM05D000886 ORTHO05D000525 9.8e-12 74.3 114 36.8
Aqoxy2G02680 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 1.7e-11 73.6 115 34.8
AT5G48350 Arabidopsis thaliana HOM05D000886 ORTHO05D000525 1.7e-11 73.6 106 36.8
Aqoxy2G02682 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 2.9e-11 72.8 119 36.1
QL02p073879 Quercus lobata HOM05D000886 ORTHO05D000525 6.4e-11 71.6 119 37.8
Pp3c2_23990 Physcomitrium patens HOM05D000886 ORTHO05D000525 8.3e-11 71.2 125 31.2
AL2G23470 Arabidopsis lyrata HOM05D000886 ORTHO05D000525 1.1e-10 70.9 157 33.1
BolC8t51297H Brassica oleracea HOM05D000886 ORTHO05D000525 1.4e-10 70.5 191 29.8
Prupe.4G202600 Prunus persica HOM05D008427 ORTHO05D010551 1.8e-10 70.1 110 40.0
Haze_14765 Corylus avellana HOM05D000087 ORTHO05D001941 2.4e-10 69.7 119 37.0
PSO675G6200 Papaver somniferum HOM05D000886 ORTHO05D000525 3.2e-10 69.3 181 26.5
SHI23918 Sapria himalayana HOM05D008427 ORTHO05D000525 3.2e-10 69.3 115 36.5
FAN11G2385 Fragaria x ananassa HOM05D000886 ORTHO05D000525 4.1e-10 68.9 127 33.9
BcaC08g45192 Brassica carinata HOM05D000886 ORTHO05D000525 7.0e-10 68.2 112 38.4
C06p28200 Brassica napus HOM05D000886 ORTHO05D000525 7.0e-10 68.2 112 38.4
BolC6t37986H Brassica oleracea HOM05D000886 ORTHO05D000525 7.0e-10 68.2 112 38.4
FAN21G0926 Fragaria x ananassa HOM05D000886 ORTHO05D000525 1.2e-09 67.4 127 34.6
AL2G23480 Arabidopsis lyrata HOM05D000886 ORTHO05D000525 1.6e-09 67.0 109 36.7
arahy.Tifrunner.gnm1.ann1.3SM0CX Arachis hypogaea HOM05D000886 ORTHO05D000525 1.6e-09 67.0 108 32.4
FvH4_3g05762 Fragaria vesca HOM05D000886 ORTHO05D000525 1.6e-09 67.0 127 33.1
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 1.6e-09 67.0 119 37.0
PSO541G3748 Papaver somniferum HOM05D000886 ORTHO05D000525 2.0e-09 66.6 111 30.6
ATR0693G315 Amborella trichopoda HOM05D000886 ORTHO05D000525 2.7e-09 66.2 126 31.0
BraA09t40844Z Brassica rapa HOM05D000886 ORTHO05D000525 3.5e-09 65.9 191 30.4
Atru.chr2.1104 Acer truncatum HOM05D000886 ORTHO05D000525 4.6e-09 65.5 113 38.1
A09p54320 Brassica napus HOM05D000886 ORTHO05D000525 7.8e-09 64.7 191 30.9
CiPaw.04G030000 Carya illinoinensis HOM05D000886 ORTHO05D000525 7.8e-09 64.7 127 32.3
Dinv04815 Davidia involucrata HOM05D000886 ORTHO05D000525 1.0e-08 64.3 109 34.9
Nn8g39916 Nelumbo nucifera HOM05D000886 ORTHO05D000525 1.0e-08 64.3 103 37.9
PSO541G1163 Papaver somniferum HOM05D000886 ORTHO05D000525 1.0e-08 64.3 181 26.5
Rhsim04G0069800 Rhododendron simsii HOM05D000886 ORTHO05D000525 1.7e-08 63.5 109 34.9
AUR62011771 Chenopodium quinoa HOM05D018970 ORTHO05D019524 2.3e-08 63.2 114 35.1
Prupe.4G179100 Prunus persica HOM05D000886 ORTHO05D000525 2.3e-08 63.2 110 30.9
Carub.0006s2416 Capsella rubella HOM05D000886 ORTHO05D000525 3.0e-08 62.8 118 33.9
Cfa006725 Carpinus fangiana HOM05D008582 ORTHO05D010200 3.9e-08 62.4 120 35.0
CiPaw.01G083200 Carya illinoinensis HOM05D000886 ORTHO05D000525 3.9e-08 62.4 110 29.1
Prupe.3G008200 Prunus persica HOM05D000886 ORTHO05D000525 3.9e-08 62.4 190 27.4
AUR62024614 Chenopodium quinoa HOM05D000886 ORTHO05D000525 5.0e-08 62.0 114 34.2
HanXRQChr09g0253651 Helianthus annuus HOM05D000886 ORTHO05D000525 5.0e-08 62.0 109 32.1
Nn7g36495 Nelumbo nucifera HOM05D000886 ORTHO05D000525 5.0e-08 62.0 109 33.0
PGR083G1689 Punica granatum HOM05D000886 ORTHO05D000525 5.0e-08 62.0 109 33.9
PGR083G2382 Punica granatum HOM05D000886 ORTHO05D000525 5.0e-08 62.0 109 33.9
CAN.G1076.28 Capsicum annuum HOM05D000886 ORTHO05D000525 6.6e-08 61.6 110 31.8
CsaV3_3G040060 Cucumis sativus L. HOM05D000886 ORTHO05D000525 6.6e-08 61.6 110 33.6
Migut.K00159 Erythranthe guttata HOM05D000886 ORTHO05D000525 6.6e-08 61.6 113 33.6
Hma1.2p1_0542F.1_g175100 Hydrangea macrophylla HOM05D007899 ORTHO05D010282 6.6e-08 61.6 111 32.4
Lsat_1_v5_gn_9_55780 Lactuca sativa HOM05D000886 ORTHO05D000525 6.6e-08 61.6 110 30.9
PGR083G1422 Punica granatum HOM05D000886 ORTHO05D000525 6.6e-08 61.6 109 33.9
Rhsim04G0117500 Rhododendron simsii HOM05D000886 ORTHO05D000525 6.6e-08 61.6 108 34.3
MELO3C009746.2 Cucumis melo HOM05D000886 ORTHO05D000525 8.6e-08 61.2 110 33.6
Duzib128G1006 Durio zibethinus HOM05D000886 ORTHO05D000525 8.6e-08 61.2 109 33.0
Glyma.18G194500 Glycine max HOM05D000886 ORTHO05D000525 8.6e-08 61.2 112 29.5
Lalb_Chr01g0016721 Lupinus albus HOM05D000886 ORTHO05D000525 8.6e-08 61.2 110 26.4
Sabra19G0033300 Salix brachista HOM05D008427 ORTHO05D010551 8.6e-08 61.2 110 33.6
SGA_v2.0_scaffold240G44131 Striga asiatica HOM05D000886 ORTHO05D000525 8.6e-08 61.2 110 33.6
Solyc01g100680.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 1.1e-07 60.8 126 30.2
PGSC0003DMG400042198 Solanum tuberosum HOM05D000886 ORTHO05D000525 1.1e-07 60.8 126 31.0
HanXRQChr15g0495511 Helianthus annuus HOM05D000886 ORTHO05D000525 1.5e-07 60.5 110 30.9
Lsat_1_v5_gn_9_55760 Lactuca sativa HOM05D000886 ORTHO05D000525 1.5e-07 60.5 110 31.8
Lj3g0008510 Lotus japonicus HOM05D000886 ORTHO05D000525 1.5e-07 60.5 108 36.1
Nitab4.5_0003694g0040 Nicotiana tabacum HOM05D000886 ORTHO05D000525 1.5e-07 60.5 107 33.6
Atru.chr2.1081 Acer truncatum HOM05D008427 ORTHO05D010551 1.9e-07 60.1 118 33.1
Atru.chr2.1098 Acer truncatum HOM05D000886 ORTHO05D010551 1.9e-07 60.1 120 34.2
ECA232G0102 Erigeron canadensis HOM05D000886 ORTHO05D000525 1.9e-07 60.1 110 30.9
Phvul.008G111200 Phaseolus vulgaris HOM05D000886 ORTHO05D000525 1.9e-07 60.1 108 33.3
Sed0011417 Sechium edule HOM05D000886 ORTHO05D000525 1.9e-07 60.1 109 32.1
Solyc01g100670.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 1.9e-07 60.1 126 28.6
Ah.02g112500 Amaranthus hybridus HOM05D000886 ORTHO05D000525 2.5e-07 59.7 115 35.7
ECA232G4885 Erigeron canadensis HOM05D000886 ORTHO05D000525 2.5e-07 59.7 109 30.3
Hma1.2p1_1765F.1_g301420 Hydrangea macrophylla HOM05D007899 ORTHO05D010282 2.5e-07 59.7 111 32.4
Oeu053737.1 Olea europaea HOM05D000886 ORTHO05D000525 2.5e-07 59.7 109 30.3
Potri.019G021900 Populus trichocarpa HOM05D008427 ORTHO05D010551 2.5e-07 59.7 110 32.7
Glyma.07G143200 Glycine max HOM05D000886 ORTHO05D000525 3.3e-07 59.3 108 32.4
Oeu060771.1 Olea europaea HOM05D000886 ORTHO05D000525 3.3e-07 59.3 113 35.4
arahy.Tifrunner.gnm1.ann1.R5PY9S Arachis hypogaea HOM05D000886 ORTHO05D000525 4.3e-07 58.9 191 26.2
Haze_04035 Corylus avellana HOM05D008582 ORTHO05D010200 4.3e-07 58.9 118 36.4
Lj1g0021355 Lotus japonicus HOM05D000886 ORTHO05D000525 4.3e-07 58.9 108 31.5
Os01g0660800 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 4.3e-07 58.9 109 30.3
Potri.013G049000 Populus trichocarpa HOM05D000886 ORTHO05D010551 4.3e-07 58.9 111 30.6
VMungo0647G2538 Vigna mungo HOM05D000886 ORTHO05D000525 4.3e-07 58.9 110 31.8
Lj8P110T28 Lonicera japonica HOM05D000886 ORTHO05D000525 5.6e-07 58.5 110 34.5
Nitab4.5_0001338g0080 Nicotiana tabacum HOM05D000886 ORTHO05D000525 5.6e-07 58.5 126 29.4
Nitab4.5_0004525g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 5.6e-07 58.5 126 29.4
Oeu064753.1 Olea europaea HOM05D000886 ORTHO05D000525 5.6e-07 58.5 108 33.3
Thecc.01G317300 Theobroma cacao HOM05D000886 ORTHO05D000525 5.6e-07 58.5 126 28.6
ClCG10G016290 Citrullus lanatus HOM05D000886 ORTHO05D000525 7.3e-07 58.2 109 32.1
Cc00_g29270 Coffea canephora HOM05D000886 ORTHO05D000525 7.3e-07 58.2 110 29.1
Nitab4.5_0001338g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 7.3e-07 58.2 126 29.4
THA.LOC104826796 Tarenaya hassleriana HOM05D008427 ORTHO05D010551 7.3e-07 58.2 114 33.3
TPR.G1581 Trifolium pratense HOM05D000886 ORTHO05D000525 7.3e-07 58.2 108 32.4
Aqoxy2G02686 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 9.5e-07 57.8 104 33.7
EL10Ac3g07294 Beta vulgaris HOM05D000886 ORTHO05D000525 9.5e-07 57.8 109 30.3
Haze_20280 Corylus avellana HOM05D000886 ORTHO05D000525 9.5e-07 57.8 108 32.4
Eucgr.K01677 Eucalyptus grandis HOM05D000886 ORTHO05D000525 9.5e-07 57.8 108 32.4
Lj3P844T47 Lonicera japonica HOM05D000886 ORTHO05D000525 9.5e-07 57.8 109 33.9
SEGI_23564 Sequoiadendron giganteum HOM05D000886 ORTHO05D000525 9.5e-07 57.8 108 28.7
Aqoxy2G02678 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 1.2e-06 57.4 113 31.0
CiPaw.08G087400 Carya illinoinensis HOM05D000886 ORTHO05D000525 1.2e-06 57.4 111 34.2
DCAR_013532 Daucus carota HOM05D000886 ORTHO05D000525 1.2e-06 57.4 108 35.2
HanXRQChr15g0495501 Helianthus annuus HOM05D000886 ORTHO05D000525 1.2e-06 57.4 109 32.1
PSO761G0004 Papaver somniferum HOM05D000886 ORTHO05D000525 1.2e-06 57.4 110 33.6
Rhsim04G0117600 Rhododendron simsii HOM05D000886 ORTHO05D000525 1.2e-06 57.4 112 30.4
Sabra13G0045300 Salix brachista HOM05D000886 ORTHO05D000525 1.2e-06 57.4 111 31.5
Zm00001eb157800 Zea mays HOM05D000886 ORTHO05D000525 1.2e-06 57.4 109 30.3
Actinidia17919 Actinidia chinensis HOM05D000886 ORTHO05D000525 1.6e-06 57.0 156 25.6
Aa31LG3G5270 Aethionema arabicum HOM05D008427 ORTHO05D010551 1.6e-06 57.0 120 30.0
MD12G1053400 Malus domestica HOM05D000886 ORTHO05D000525 1.6e-06 57.0 107 31.8
Oeu060772.1 Olea europaea HOM05D000886 ORTHO05D000525 1.6e-06 57.0 108 35.2
Peaxi162Scf00626g00062 Petunia axillaris HOM05D000886 ORTHO05D000525 1.6e-06 57.0 110 29.1
SalBow1G2078 Salvia bowleyana HOM05D000886 ORTHO05D000525 1.6e-06 57.0 109 33.9
Atru.chr2.1095 Acer truncatum HOM05D008427 ORTHO05D010551 2.1e-06 56.6 103 35.0
Cfa016274 Carpinus fangiana HOM05D000886 ORTHO05D000525 2.1e-06 56.6 110 27.3
Ciclev10012328m.g Citrus clementina HOM05D000886 ORTHO05D000525 2.1e-06 56.6 110 32.7
Haze_00024 Corylus avellana HOM05D000886 ORTHO05D000525 2.1e-06 56.6 113 28.3
Hma1.2p1_1283F.1_g272790 Hydrangea macrophylla HOM05D000886 ORTHO05D000525 2.1e-06 56.6 101 32.7
Nitab4.5_0003544g0020 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.1e-06 56.6 113 32.7
PSO782G0468 Papaver somniferum HOM05D000886 ORTHO05D000525 2.1e-06 56.6 110 34.5
Peaxi162Scf01061g00003 Petunia axillaris HOM05D000886 ORTHO05D000525 2.1e-06 56.6 126 28.6
Aa31sc52G270 Aethionema arabicum HOM05D008427 ORTHO05D010551 2.8e-06 56.2 72 43.1
Aa31sc52G280 Aethionema arabicum HOM05D008427 ORTHO05D010551 2.8e-06 56.2 109 33.9
BcaB03g13785 Brassica carinata HOM05D004185 ORTHO05D005294 2.8e-06 56.2 124 29.8
CANSAT56G3075 Cannabis sativa HOM05D000886 ORTHO05D000525 2.8e-06 56.2 113 30.1
Cfa016272 Carpinus fangiana HOM05D000886 ORTHO05D000525 2.8e-06 56.2 114 28.1
ECA232G0318 Erigeron canadensis HOM05D000886 ORTHO05D000525 2.8e-06 56.2 111 28.8
HanXRQChr09g0238531 Helianthus annuus HOM05D000886 ORTHO05D000525 2.8e-06 56.2 110 29.1
Nitab4.5_0000642g0270 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.8e-06 56.2 101 31.7
Nitab4.5_0000699g0130 Nicotiana tabacum HOM05D000886 ORTHO05D000525 3.6e-06 55.8 113 31.9
PSO017G2927 Papaver somniferum HOM05D000886 ORTHO05D000525 3.6e-06 55.8 121 33.1
PSO478G2437 Papaver somniferum HOM05D000886 ORTHO05D000525 3.6e-06 55.8 188 25.0
PGSC0003DMG400006389 Solanum tuberosum HOM05D000886 ORTHO05D000525 3.6e-06 55.8 110 28.2
VMungo0647G0937 Vigna mungo HOM05D000886 ORTHO05D000525 3.6e-06 55.8 108 31.5
Atru.chr1.1145 Acer truncatum HOM05D000886 ORTHO05D000525 4.7e-06 55.5 109 32.1
HanXRQChr15g0495481 Helianthus annuus HOM05D000886 ORTHO05D000525 4.7e-06 55.5 114 30.7
Peaxi162Scf00001g00142 Petunia axillaris HOM05D000909 ORTHO05D010573 4.7e-06 55.5 87 36.8
Potri.006G031400 Populus trichocarpa HOM05D000886 ORTHO05D000525 4.7e-06 55.5 109 31.2
Thhalv10021553m.g Eutrema salsugineum HOM05D008427 ORTHO05D010551 6.2e-06 55.1 112 33.0
Thhalv10024031m.g Eutrema salsugineum HOM05D000886 ORTHO05D000525 6.2e-06 55.1 49 49.0
SalBow6G6665 Salvia bowleyana HOM05D000886 ORTHO05D000525 6.2e-06 55.1 99 36.4
Aqoxy2G02683 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 8.0e-06 54.7 93 32.3
AT3G62320 Arabidopsis thaliana HOM05D000886 ORTHO05D000525 8.0e-06 54.7 188 24.5
BcaB06g25585 Brassica carinata HOM05D008427 ORTHO05D010551 8.0e-06 54.7 86 32.6
BcaC05g29332 Brassica carinata HOM05D008427 ORTHO05D010551 8.0e-06 54.7 86 32.6
C05p56140 Brassica napus HOM05D008427 ORTHO05D010551 8.0e-06 54.7 86 32.6
BolC5t34280H Brassica oleracea HOM05D008427 ORTHO05D010551 8.0e-06 54.7 86 32.6
BraA05t22555Z Brassica rapa HOM05D008427 ORTHO05D010551 8.0e-06 54.7 98 32.7
CARHR086320 Cardamine hirsuta HOM05D008427 ORTHO05D010551 8.0e-06 54.7 100 33.0
ECA236G1845 Erigeron canadensis HOM05D000886 ORTHO05D000525 8.0e-06 54.7 88 37.5
Migut.J01614 Erythranthe guttata HOM05D000886 ORTHO05D000525 8.0e-06 54.7 107 29.9
Oeu064751.1 Olea europaea HOM05D000886 ORTHO05D000525 8.0e-06 54.7 108 34.3
Os01g0737600 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 8.0e-06 54.7 110 30.9
Peaxi162Scf00563g00310 Petunia axillaris HOM05D000886 ORTHO05D000525 8.0e-06 54.7 83 36.1


User provided reference genes

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