Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10237_v3 Cicer arietinum L. HOM05D005434 ORTHO05D006412 0.0e+00 1435.2 750 100.0
TPR.G3083 Trifolium pratense HOM05D005434 ORTHO05D006412 0.0e+00 1102.4 757 78.2
Psat6g158560 Pisum sativum HOM05D005434 ORTHO05D006412 0.0e+00 1092.4 757 77.5
Medtr1g085710 Medicago truncatula HOM05D005434 ORTHO05D006412 1.0e-294 1016.5 762 74.1
Lj5g0001301 Lotus japonicus HOM05D005434 ORTHO05D006412 5.3e-275 951.0 783 69.0
Glyma.10G138700 Glycine max HOM05D005434 ORTHO05D006412 1.8e-246 856.3 801 64.0
Glyma.02G007100 Glycine max HOM05D005434 ORTHO05D006412 6.3e-244 847.8 766 65.5
Phvul.007G208600 Phaseolus vulgaris HOM05D005434 ORTHO05D006412 2.0e-237 826.2 767 64.3
VMungo0720G1215 Vigna mungo HOM05D005434 ORTHO05D006412 4.0e-222 775.4 743 61.9
arahy.Tifrunner.gnm1.ann1.G6BN46 Arachis hypogaea HOM05D005434 ORTHO05D006412 2.0e-189 666.8 797 52.1
arahy.Tifrunner.gnm1.ann1.9BA1LG Arachis hypogaea HOM05D005434 ORTHO05D006412 1.7e-135 487.6 604 51.0
Lalb_Chr02g0147191 Lupinus albus HOM05D005434 ORTHO05D006412 6.8e-121 439.1 544 52.2
QL12p035062 Quercus lobata HOM05D005434 ORTHO05D006412 1.1e-110 405.2 760 40.0
MD17G1286100 Malus domestica HOM05D005434 ORTHO05D006412 3.6e-106 390.2 804 37.8
Manes.05G008100 Manihot esculenta HOM05D005434 ORTHO05D006412 6.1e-106 389.4 786 37.7
MD09G1291300 Malus domestica HOM05D005434 ORTHO05D006412 1.0e-105 388.7 797 38.6
Atru.chr5.851 Acer truncatum HOM05D005434 ORTHO05D006412 6.4e-103 379.4 789 36.8
Thecc.01G326300 Theobroma cacao HOM05D005434 ORTHO05D006412 3.5e-101 373.6 787 38.5
Dinv12078 Davidia involucrata HOM05D005434 ORTHO05D006412 3.9e-100 370.2 654 41.3
Potri.002G186200 Populus trichocarpa HOM05D005434 ORTHO05D006412 1.4e-97 361.7 831 34.9
Prupe.3G001600 Prunus persica HOM05D005434 ORTHO05D006412 6.8e-97 359.4 744 39.4
Actinidia20964 Actinidia chinensis HOM05D005434 ORTHO05D006412 1.2e-96 358.6 789 36.5
Gorai.001G148200 Gossypium raimondii HOM05D005434 ORTHO05D006412 1.2e-96 358.6 782 37.9
CiPaw.08G081800 Carya illinoinensis HOM05D005434 ORTHO05D006412 2.6e-96 357.5 799 36.4
RcHm_v2.0_Chr3g0485651 Rosa chinensis HOM05D005434 ORTHO05D006412 2.6e-96 357.5 789 36.6
COL.COLO4_23119 Corchorus olitorius HOM05D005434 ORTHO05D006412 7.8e-93 345.9 768 36.8
Potri.014G111500 Populus trichocarpa HOM05D005434 ORTHO05D006412 2.5e-91 340.9 833 34.7
Gohir.A07G131800 Gossypium hirsutum HOM05D005434 ORTHO05D006412 5.6e-91 339.7 779 36.8
Haze_05156 Corylus avellana HOM05D005434 ORTHO05D006412 1.5e-88 331.6 730 37.0
Duzib138G0614 Durio zibethinus HOM05D005434 ORTHO05D006412 3.5e-85 320.5 774 35.9
FvH4_1g26160 Fragaria vesca HOM05D005434 ORTHO05D006412 8.6e-84 315.8 867 33.7
FAN19G2204 Fragaria x ananassa HOM05D005434 ORTHO05D006412 7.3e-83 312.8 867 33.7
Duzib133G0025 Durio zibethinus HOM05D005434 ORTHO05D006412 2.8e-82 310.8 737 35.8
FAN26G2209 Fragaria x ananassa HOM05D005434 ORTHO05D006412 8.1e-82 309.3 862 33.3
Sabra14G0081900 Salix brachista HOM05D005434 ORTHO05D006412 1.1e-81 308.9 816 33.8
Lalb_Chr02g0147201 Lupinus albus HOM05D005434 ORTHO05D006412 5.2e-81 306.6 209 80.4
FAN23G2884 Fragaria x ananassa HOM05D005434 ORTHO05D006412 1.5e-80 305.1 865 33.3
Gohir.D07G136100 Gossypium hirsutum HOM05D005434 ORTHO05D006412 1.9e-78 298.1 730 35.9
Rhsim02G0256300 Rhododendron simsii HOM05D005434 ORTHO05D006412 7.1e-78 296.2 769 34.1
Sed0005889 Sechium edule HOM05D005434 ORTHO05D006412 1.5e-75 288.5 801 32.7
TAR365G0925 Trochodendron aralioides HOM05D005434 ORTHO05D006412 1.4e-73 282.0 770 34.3
Gohir.A11G105400 Gossypium hirsutum HOM05D005434 ORTHO05D006412 1.8e-73 281.6 839 31.6
TAR636G0087 Trochodendron aralioides HOM05D005434 ORTHO05D006412 5.3e-73 280.0 783 34.2
ClCG02G017720 Citrullus lanatus HOM05D005434 ORTHO05D006412 6.9e-73 279.6 750 33.6
TWI14G0253 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 6.9e-73 279.6 842 32.8
Sed0026347 Sechium edule HOM05D005434 ORTHO05D006412 9.9e-72 275.8 781 33.4
Gohir.D11G110300 Gossypium hirsutum HOM05D005434 ORTHO05D006412 1.4e-70 271.9 831 32.4
AL4G46460 Arabidopsis lyrata HOM05D005434 ORTHO05D006412 5.4e-70 270.0 785 31.2
CsaV3_6G012840 Cucumis sativus L. HOM05D005434 ORTHO05D006412 5.4e-70 270.0 781 33.5
AT2G46980 Arabidopsis thaliana HOM05D005434 ORTHO05D006412 7.1e-70 269.6 777 31.0
Gorai.007G117900 Gossypium raimondii HOM05D005434 ORTHO05D006412 9.3e-70 269.2 832 32.2
Carub.0004s2971 Capsella rubella HOM05D005434 ORTHO05D006412 1.3e-68 265.4 778 31.1
CARHR142350 Cardamine hirsuta HOM05D005434 ORTHO05D006412 2.3e-68 264.6 783 31.3
CANSAT25G2989 Cannabis sativa HOM05D005434 ORTHO05D006412 3.9e-68 263.8 891 29.9
MELO3C013628.2 Cucumis melo HOM05D005434 ORTHO05D006412 1.9e-67 261.5 774 33.3
Sp4g28980 Schrenkiella parvula HOM05D005434 ORTHO05D006412 1.3e-66 258.8 785 31.0
FAN28G1136 Fragaria x ananassa HOM05D005434 ORTHO05D006412 8.4e-63 246.1 911 31.0
PGR142G2929 Punica granatum HOM05D005434 ORTHO05D006412 1.4e-62 245.4 933 30.7
Thhalv10001318m.g Eutrema salsugineum HOM05D005434 ORTHO05D006412 1.9e-62 245.0 773 32.7
C04p00990 Brassica napus HOM05D005434 ORTHO05D006412 9.3e-62 242.7 756 30.2
BraA05t19085Z Brassica rapa HOM05D005434 ORTHO05D006412 7.9e-61 239.6 755 29.7
Nn3g21972 Nelumbo nucifera HOM05D005434 ORTHO05D006412 3.0e-60 237.7 884 30.7
PSO210G4596 Papaver somniferum HOM05D005434 ORTHO05D006412 2.8e-58 231.1 704 31.4
Solyc01g079080.3 Solanum lycopersicum HOM05D005434 ORTHO05D006412 8.1e-58 229.6 766 30.0
Sopen01g030590 Solanum pennellii HOM05D005434 ORTHO05D006412 1.4e-57 228.8 766 29.9
Aa31LG1G28350 Aethionema arabicum HOM05D005434 ORTHO05D006412 3.1e-57 227.6 784 30.0
MBI18_g03842_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 4.5e-56 223.8 789 30.2
BcaC02g12619 Brassica carinata HOM05D005434 ORTHO05D006412 4.9e-55 220.3 627 31.9
DCAR_002941 Daucus carota HOM05D005434 ORTHO05D006412 6.4e-55 219.9 750 31.2
Eucgr.K00557 Eucalyptus grandis HOM05D005434 ORTHO05D006412 4.2e-54 217.2 788 29.6
PGSC0003DMG400001122 Solanum tuberosum HOM05D005434 ORTHO05D006412 7.9e-53 213.0 753 30.3
Cc01_g21750 Coffea canephora HOM05D005434 ORTHO05D006412 6.7e-52 209.9 709 31.5
BolC4t21751H Brassica oleracea HOM05D005434 ORTHO05D006412 1.1e-51 209.1 601 31.1
CAN.G179.30 Capsicum annuum HOM05D005434 ORTHO05D006412 4.3e-51 207.2 755 28.9
Cpa.g.sc57.27 Carica papaya HOM05D005434 ORTHO05D006412 9.6e-51 206.1 727 31.4
Aqoxy2G02439 Aquilegia oxysepala HOM05D005434 ORTHO05D006412 1.6e-50 205.3 679 31.1
Lj1A7G43 Lonicera japonica HOM05D005434 ORTHO05D006412 4.8e-50 203.8 223 50.2
BcaC02g12826 Brassica carinata HOM05D005434 ORTHO05D006412 6.2e-50 203.4 778 29.0
SHI34042 Sapria himalayana HOM05D005434 ORTHO05D006412 1.1e-49 202.6 764 31.0
A05p00820 Brassica napus HOM05D005434 ORTHO05D006412 4.5e-48 197.2 708 29.7
Migut.D00008 Erythranthe guttata HOM05D005434 ORTHO05D006412 7.6e-48 196.4 639 31.6
Ciclev10019510m.g Citrus clementina HOM05D005434 ORTHO05D006412 2.9e-47 194.5 530 33.2
ECA247G2130 Erigeron canadensis HOM05D005434 ORTHO05D008082 1.1e-46 192.6 781 29.1
Peaxi162Scf00309g00625 Petunia axillaris HOM05D005434 ORTHO05D006412 1.4e-46 192.2 750 29.6
DCAR_005712 Daucus carota HOM05D005434 ORTHO05D006412 3.2e-46 191.0 901 26.4
CSS0010810 Camellia sinensis var. sinensis HOM05D005434 ORTHO05D006412 1.8e-44 185.3 536 33.6
AUR62011691 Chenopodium quinoa HOM05D005434 ORTHO05D006412 6.3e-42 176.8 775 29.4
GSVIVG01028240001 Vitis vinifera HOM05D005434 ORTHO05D006412 8.2e-42 176.4 539 35.3
Lsat_1_v5_gn_9_7120 Lactuca sativa HOM05D005434 ORTHO05D006412 1.5e-40 172.2 649 28.7
Sc17g0000070 Simmondsia chinensis HOM05D005434 ORTHO05D006412 3.4e-40 171.0 616 30.5
MBI19_g04828_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 4.5e-40 170.6 813 29.8
Nitab4.5_0000222g0380 Nicotiana tabacum HOM05D005434 ORTHO05D006412 1.7e-39 168.7 766 27.9
AUR62024551 Chenopodium quinoa HOM05D005434 ORTHO05D006412 2.5e-38 164.9 615 30.7
EL10Ac4g10377 Beta vulgaris HOM05D005434 ORTHO05D006412 2.1e-37 161.8 754 28.2
Oeu052591.1 Olea europaea HOM05D005434 ORTHO05D006412 2.7e-37 161.4 664 28.9
CiPaw.07G126400 Carya illinoinensis HOM05D005434 ORTHO05D006412 1.0e-36 159.5 140 56.4
SGA_v2.0_scaffold310G48189 Striga asiatica HOM05D005434 ORTHO05D006412 3.9e-36 157.5 614 29.8
GSVIVG01028239001 Vitis vinifera HOM05D005434 ORTHO05D006412 5.1e-36 157.1 137 56.2
SGA_v2.0_scaffold417G51248 Striga asiatica HOM05D005434 ORTHO05D006412 1.1e-35 156.0 698 27.8
Sc17g0000050 Simmondsia chinensis HOM05D005434 ORTHO05D006412 5.9e-32 143.7 167 46.1
Zm00001eb233800 Zea mays HOM05D005434 ORTHO05D006412 1.0e-31 142.9 658 28.1
Lj1A7T44 Lonicera japonica HOM05D005434 ORTHO05D006412 1.3e-31 142.5 507 32.0
Dinv33176 Davidia involucrata HOM05D005434 ORTHO05D006412 6.5e-31 140.2 276 38.8
Dinv33178 Davidia involucrata HOM05D005434 ORTHO05D006412 1.2e-29 136.0 107 66.4
TWI23G0760 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 3.9e-28 131.0 621 29.5
Nitab4.5_0003092g0060 Nicotiana tabacum HOM05D005434 ORTHO05D006412 6.7e-28 130.2 698 25.9
Ciclev10023478m.g Citrus clementina HOM05D005434 ORTHO05D006412 4.4e-27 127.5 95 67.4
HPP92_011320 Vanilla planifolia HOM05D005434 ORTHO05D006412 3.7e-26 124.4 700 26.3
Os10g0405500 Oryza sativa ssp. japonica HOM05D005434 ORTHO05D006412 6.3e-26 123.6 746 26.8
CiPaw.07G126300 Carya illinoinensis HOM05D005434 ORTHO05D006412 1.4e-25 122.5 571 28.0
BcaB07g33880 Brassica carinata HOM05D005434 ORTHO05D006412 4.5e-24 117.5 344 30.8
Actinidia25873 Actinidia chinensis HOM05D005434 ORTHO05D006412 1.4e-22 112.5 616 28.2
CDE02G0039 Ceratophyllum demersum HOM05D005434 ORTHO05D006412 1.4e-20 105.9 172 39.0
unitig_62.g23901 Utricularia gibba HOM05D005434 ORTHO05D006412 3.7e-18 97.8 179 35.2
SEGI_30180 Sequoiadendron giganteum HOM05D005434 ORTHO05D006412 1.0e-12 79.7 200 26.0
PGSC0003DMG400023095 Solanum tuberosum HOM05D005434 ORTHO05D007977 1.8e-12 79.0 96 44.8
Dinv33187 Davidia involucrata HOM05D005434 ORTHO05D006412 4.0e-12 77.8 297 31.6
BolC3t15425H Brassica oleracea HOM05D005434 ORTHO05D006412 1.7e-10 72.4 362 24.9
C03p30750 Brassica napus HOM05D005434 ORTHO05D011138 2.4e-09 68.6 359 24.8
AagrBONN_evm.TU.Sc2ySwM_344.3613 Anthoceros agrestis HOM05D022252 ORTHO05D006412 3.1e-09 68.2 139 29.5
BcaC01g05050 Brassica carinata HOM05D005434 ORTHO05D006412 1.3e-07 62.8 122 36.1
Dinv33188 Davidia involucrata HOM05D005434 ORTHO05D006412 2.5e-06 58.5 101 42.6
VMungo0251G2966 Vigna mungo HOM05D005434 ORTHO05D006412 3.2e-06 58.2 155 35.5
CDE08G1326 Ceratophyllum demersum HOM05D005434 ORTHO05D006412 5.5e-06 57.4 74 35.1


User provided reference genes

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