Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10083_v3 Cicer arietinum L. HOM05D006966 ORTHO05D008111 1.6e-84 316.2 184 100.0
Medtr1g082320 Medicago truncatula HOM05D006966 ORTHO05D008111 1.0e-22 110.9 184 48.9
TPR.G2724 Trifolium pratense HOM05D006966 ORTHO05D008111 9.7e-21 104.4 178 48.9
Psat6g148600 Pisum sativum HOM05D006966 ORTHO05D008111 1.3e-17 94.0 189 42.9
Glyma.10G157600 Glycine max HOM05D006966 ORTHO05D008111 5.1e-14 82.0 179 44.7
Glyma.20G231100 Glycine max HOM05D006966 ORTHO05D008111 2.8e-12 76.3 78 48.7
Lj5g0008249 Lotus japonicus HOM05D006966 ORTHO05D008111 3.1e-11 72.8 172 43.6
VMungo0720G1138 Vigna mungo HOM05D006966 ORTHO05D008111 3.5e-10 69.3 86 40.7
RcHm_v2.0_Chr3g0453941 Rosa chinensis HOM05D006966 ORTHO05D008111 7.7e-10 68.2 98 41.8
Gorai.004G243700 Gossypium raimondii HOM05D006966 ORTHO05D008111 2.2e-09 66.6 100 43.0
Gohir.D08G229500 Gossypium hirsutum HOM05D006966 ORTHO05D008111 5.0e-09 65.5 100 42.0
TWI12G1291 Tripterygium wilfordii HOM05D006966 ORTHO05D008111 6.5e-09 65.1 124 44.4
FAN09G4667 Fragaria x ananassa HOM05D006966 ORTHO05D008111 1.1e-08 64.3 93 43.0
Nn3g21196 Nelumbo nucifera HOM05D006966 ORTHO05D008111 1.5e-08 63.9 83 38.6
Lalb_Chr06g0167831 Lupinus albus HOM05D006966 ORTHO05D008111 1.9e-08 63.5 171 39.2
Potri.005G037600 Populus trichocarpa HOM05D006966 ORTHO05D008111 1.9e-08 63.5 108 38.9
Cpa.g.sc48.3 Carica papaya HOM05D006966 ORTHO05D008111 2.5e-08 63.2 99 38.4
Glyma.19G238400 Glycine max HOM05D006966 ORTHO05D008111 2.5e-08 63.2 68 52.9
Gohir.A08G212500 Gossypium hirsutum HOM05D006966 ORTHO05D008111 2.5e-08 63.2 100 42.0
Medtr7g113950 Medicago truncatula HOM05D006966 ORTHO05D008111 3.2e-08 62.8 67 50.7
Glyma.03G240900 Glycine max HOM05D006966 ORTHO05D008111 5.5e-08 62.0 68 51.5
Manes.08G123800 Manihot esculenta HOM05D006966 ORTHO05D008111 5.5e-08 62.0 111 44.1
CiPaw.08G167600 Carya illinoinensis HOM05D006966 ORTHO05D008111 9.4e-08 61.2 83 55.4
Phvul.006G095100 Phaseolus vulgaris HOM05D006966 ORTHO05D008111 9.4e-08 61.2 180 32.2
TAR633G0886 Trochodendron aralioides HOM05D006966 ORTHO05D008111 9.4e-08 61.2 42 69.0
FvH4_6g05230 Fragaria vesca HOM05D006966 ORTHO05D008111 1.2e-07 60.8 93 39.8
Sc09g0003390 Simmondsia chinensis HOM05D006966 ORTHO05D008111 1.2e-07 60.8 42 59.5
VMungo0540G1150 Vigna mungo HOM05D006966 ORTHO05D008111 1.2e-07 60.8 87 43.7
Duzib177G0559 Durio zibethinus HOM05D006966 ORTHO05D008111 1.6e-07 60.5 72 43.1
FAN14G0100 Fragaria x ananassa HOM05D006966 ORTHO05D008111 1.6e-07 60.5 91 41.8
FAN14G4059 Fragaria x ananassa HOM05D006966 ORTHO05D008111 1.6e-07 60.5 91 41.8
Hma1.2p1_0666F.1_g199360 Hydrangea macrophylla HOM05D006966 ORTHO05D008111 1.6e-07 60.5 84 44.0
Rhsim05G0145100 Rhododendron simsii HOM05D006966 ORTHO05D008111 1.6e-07 60.5 69 42.0
Sc16g0008300 Simmondsia chinensis HOM05D006966 ORTHO05D008111 1.6e-07 60.5 74 41.9
SpUn0002_0320 Schrenkiella parvula HOM05D006966 ORTHO05D008111 2.1e-07 60.1 39 69.2
Thhalv10023602m.g Eutrema salsugineum HOM05D006966 ORTHO05D008111 2.7e-07 59.7 44 63.6
FAN05G0025 Fragaria x ananassa HOM05D006966 ORTHO05D008111 2.7e-07 59.7 93 38.7
FAN05G1324 Fragaria x ananassa HOM05D006966 ORTHO05D008111 2.7e-07 59.7 93 38.7
FAN05G1352 Fragaria x ananassa HOM05D006966 ORTHO05D008111 2.7e-07 59.7 93 38.7
arahy.Tifrunner.gnm1.ann1.3A5YKQ Arachis hypogaea HOM05D006966 ORTHO05D008111 3.6e-07 59.3 91 37.4
Dinv22908 Davidia involucrata HOM05D006966 ORTHO05D008111 3.6e-07 59.3 96 36.5
Gohir.A11G262300 Gossypium hirsutum HOM05D006966 ORTHO05D008111 3.6e-07 59.3 67 46.3
Gohir.D11G272300 Gossypium hirsutum HOM05D006966 ORTHO05D008111 3.6e-07 59.3 67 46.3
Gorai.007G293600 Gossypium raimondii HOM05D006966 ORTHO05D008111 3.6e-07 59.3 67 46.3
Sabra13G0027800 Salix brachista HOM05D006966 ORTHO05D008111 3.6e-07 59.3 111 42.3
Actinidia19807 Actinidia chinensis HOM05D001271 ORTHO05D008111 6.1e-07 58.5 64 43.8
AL1G65140 Arabidopsis lyrata HOM05D006966 ORTHO05D008111 6.1e-07 58.5 42 64.3
Lj1g0017885 Lotus japonicus HOM05D006966 ORTHO05D008111 6.1e-07 58.5 82 40.2
CiPaw.07G014000 Carya illinoinensis HOM05D006966 ORTHO05D008111 8.0e-07 58.2 94 52.1
Duzib128G0678 Durio zibethinus HOM05D006966 ORTHO05D008111 8.0e-07 58.2 71 43.7
FAN02G1750 Fragaria x ananassa HOM05D006966 ORTHO05D008111 8.0e-07 58.2 90 38.9
Cfa006536 Carpinus fangiana HOM05D006966 ORTHO05D008111 1.0e-06 57.8 79 51.9
Psat3g009600 Pisum sativum HOM05D006966 ORTHO05D008111 1.0e-06 57.8 87 36.8
CSS0005342 Camellia sinensis var. sinensis HOM05D006966 ORTHO05D008111 1.4e-06 57.4 79 40.5
Dinv40245 Davidia involucrata HOM05D000556 ORTHO05D008111 1.4e-06 57.4 85 40.0
Atru.chr2.499 Acer truncatum HOM05D006966 ORTHO05D008111 1.8e-06 57.0 70 41.4
BcaB04g20143 Brassica carinata HOM05D006966 ORTHO05D008111 2.3e-06 56.6 39 69.2
PGSC0003DMG400028568 Solanum tuberosum HOM05D006966 ORTHO05D008111 2.3e-06 56.6 86 34.9
Aa31LG2G11900 Aethionema arabicum HOM05D006966 ORTHO05D008111 3.0e-06 56.2 107 35.5
Haze_04244 Corylus avellana HOM05D006966 ORTHO05D008111 3.0e-06 56.2 76 51.3
Peaxi162Scf00434g00052 Petunia axillaris HOM05D006966 ORTHO05D008111 3.0e-06 56.2 62 45.2
Solyc01g098570.2 Solanum lycopersicum HOM05D006966 ORTHO05D008111 3.0e-06 56.2 87 36.8
Carub.0002s0866 Capsella rubella HOM05D006966 ORTHO05D008111 4.0e-06 55.8 87 42.5
MD04G1210600 Malus domestica HOM05D006966 ORTHO05D008111 4.0e-06 55.8 84 38.1
AT1G54740 Arabidopsis thaliana HOM05D006966 ORTHO05D008111 6.7e-06 55.1 39 66.7
Ciclev10002008m.g Citrus clementina HOM05D006966 ORTHO05D008111 6.7e-06 55.1 59 47.5
Lj9P680T20 Lonicera japonica HOM05D006966 ORTHO05D008111 6.7e-06 55.1 91 37.4
MD12G1224900 Malus domestica HOM05D006966 ORTHO05D008111 6.7e-06 55.1 98 37.8
CANSAT54G0218 Cannabis sativa HOM05D006966 ORTHO05D008111 8.8e-06 54.7 64 48.4
Prupe.6G331500 Prunus persica HOM05D006966 ORTHO05D008111 8.8e-06 54.7 85 37.6
TAR362G0564 Trochodendron aralioides HOM05D006966 ORTHO05D008111 8.8e-06 54.7 42 59.5


User provided reference genes

Program Settings