Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10014_v3 Cicer arietinum L. HOM05D007536 ORTHO05D009390 1.2e-87 328.2 158 100.0
TPR.G22324 Trifolium pratense HOM05D007536 ORTHO05D009390 9.3e-40 169.1 120 71.7
Glyma.20G222900 Glycine max HOM05D007536 ORTHO05D009390 1.9e-37 161.4 130 63.8
Psat6g142640 Pisum sativum HOM05D007536 ORTHO05D009390 9.7e-37 159.1 135 63.0
Medtr1g080120 Medicago truncatula HOM05D007536 ORTHO05D009390 2.4e-35 154.5 127 63.8
Phvul.008G151830 Phaseolus vulgaris HOM05D007536 ORTHO05D009390 9.4e-32 142.5 136 56.6
VMungo0720G1101 Vigna mungo HOM05D007536 ORTHO05D009390 1.8e-30 138.3 125 60.8
Lj5g0027095 Lotus japonicus HOM05D007536 ORTHO05D009390 1.1e-29 135.6 128 55.5
CSS0008501 Camellia sinensis var. sinensis HOM05D007536 ORTHO05D009390 2.0e-29 134.8 140 51.4
Lalb_Chr02g0149121 Lupinus albus HOM05D007536 ORTHO05D009390 2.4e-27 127.9 124 53.2
Aa31LG11G11200 Aethionema arabicum HOM05D007536 ORTHO05D009390 8.5e-25 119.4 122 50.0
Manes.08G053700 Manihot esculenta HOM05D007536 ORTHO05D009390 1.9e-24 118.2 116 51.7
Cpa.g.sc162.41 Carica papaya HOM05D007536 ORTHO05D009390 2.5e-24 117.9 121 57.0
CiPaw.15G107000 Carya illinoinensis HOM05D007536 ORTHO05D009390 2.7e-23 114.4 114 52.6
Haze_04425 Corylus avellana HOM05D007536 ORTHO05D009390 7.9e-23 112.8 137 47.4
C08p49910 Brassica napus HOM05D007536 ORTHO05D009390 1.4e-22 112.1 91 58.2
Dinv24676 Davidia involucrata HOM05D007536 ORTHO05D009390 1.8e-22 111.7 138 46.4
Sp1g07270 Schrenkiella parvula HOM05D007536 ORTHO05D009390 2.3e-22 111.3 129 46.5
Ah.04g163100 Amaranthus hybridus HOM05D007536 ORTHO05D009390 3.9e-22 110.5 126 46.0
BcaC07g41933 Brassica carinata HOM05D007536 ORTHO05D009390 3.9e-22 110.5 90 57.8
BolC8t52519H Brassica oleracea HOM05D007536 ORTHO05D009390 3.9e-22 110.5 90 57.8
Ciclev10019470m.g Citrus clementina HOM05D007536 ORTHO05D009390 8.8e-22 109.4 116 51.7
CANSAT54G0748 Cannabis sativa HOM05D007536 ORTHO05D009390 1.5e-21 108.6 123 46.3
Dinv18987 Davidia involucrata HOM05D007536 ORTHO05D009390 1.5e-21 108.6 134 45.5
BraA09t41926Z Brassica rapa HOM05D007536 ORTHO05D009390 2.0e-21 108.2 87 58.6
GSVIVG01023504001 Vitis vinifera HOM05D007536 ORTHO05D009390 2.0e-21 108.2 138 47.8
Atru.chr2.985 Acer truncatum HOM05D007536 ORTHO05D009390 3.3e-21 107.5 134 47.8
Lalb_Chr21g0311181 Lupinus albus HOM05D007536 ORTHO05D009390 5.7e-21 106.7 114 51.8
Thecc.05G270900 Theobroma cacao HOM05D007536 ORTHO05D009390 5.7e-21 106.7 111 53.2
CDE04G1469 Ceratophyllum demersum HOM05D007536 ORTHO05D009390 7.4e-21 106.3 100 52.0
TAR636G1433 Trochodendron aralioides HOM05D007536 ORTHO05D009390 1.3e-20 105.5 125 46.4
AL1G19040 Arabidopsis lyrata HOM05D007536 ORTHO05D009390 2.2e-20 104.8 115 46.1
CARHR008520 Cardamine hirsuta HOM05D007536 ORTHO05D009390 3.7e-20 104.0 143 39.9
Carub.0001s0797 Capsella rubella HOM05D007536 ORTHO05D009390 4.8e-20 103.6 113 44.2
COL.COLO4_15481 Corchorus olitorius HOM05D007536 ORTHO05D009390 4.8e-20 103.6 110 52.7
Lj2C43T1 Lonicera japonica HOM05D007536 ORTHO05D009390 4.8e-20 103.6 116 48.3
Gohir.A13G167300 Gossypium hirsutum HOM05D007536 ORTHO05D009390 8.2e-20 102.8 109 52.3
AT1G08610 Arabidopsis thaliana HOM05D007536 ORTHO05D009390 1.4e-19 102.1 113 46.9
Thhalv10007213m.g Eutrema salsugineum HOM05D007536 ORTHO05D009390 1.4e-19 102.1 112 46.4
Hma1.2p1_2103F.1_g314080 Hydrangea macrophylla HOM05D007536 ORTHO05D009390 1.4e-19 102.1 148 41.9
Gohir.D13G172800 Gossypium hirsutum HOM05D007536 ORTHO05D009390 2.4e-19 101.3 109 52.3
AUR62004838 Chenopodium quinoa HOM05D007536 ORTHO05D009390 4.1e-19 100.5 85 55.3
MD04G1230200 Malus domestica HOM05D007536 ORTHO05D009390 4.1e-19 100.5 108 47.2
TAR362G0895 Trochodendron aralioides HOM05D007536 ORTHO05D009390 5.3e-19 100.1 99 48.5
Gorai.013G187800 Gossypium raimondii HOM05D007536 ORTHO05D009390 7.0e-19 99.8 109 51.4
COL.COLO4_15479 Corchorus olitorius HOM05D007536 ORTHO05D009390 9.1e-19 99.4 112 50.9
Prupe.6G350100 Prunus persica HOM05D007536 ORTHO05D009390 1.6e-18 98.6 125 43.2
RcHm_v2.0_Chr3g0449641 Rosa chinensis HOM05D007536 ORTHO05D009390 2.0e-18 98.2 117 46.2
Rhsim09G0137000 Rhododendron simsii HOM05D007536 ORTHO05D009390 2.6e-18 97.8 142 40.8
Gohir.D11G257700 Gossypium hirsutum HOM05D007536 ORTHO05D009390 4.5e-18 97.1 111 48.6
Gorai.007G276000 Gossypium raimondii HOM05D007536 ORTHO05D009390 4.5e-18 97.1 111 48.6
Sc20g0000630 Simmondsia chinensis HOM05D007536 ORTHO05D009390 4.5e-18 97.1 79 57.0
ClCG03G009740 Citrullus lanatus HOM05D007536 ORTHO05D009390 5.9e-18 96.7 152 42.1
AUR62040928 Chenopodium quinoa HOM05D007536 ORTHO05D009390 7.7e-18 96.3 85 52.9
FAN09G4642 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.0e-17 95.9 116 45.7
Gohir.A11G247400 Gossypium hirsutum HOM05D007536 ORTHO05D009390 1.0e-17 95.9 112 47.3
Sopen04g005180 Solanum pennellii HOM05D007536 ORTHO05D009390 1.0e-17 95.9 85 54.1
THA.LOC104821264 Tarenaya hassleriana HOM05D007536 ORTHO05D009390 1.0e-17 95.9 114 49.1
Solyc04g010050.4 Solanum lycopersicum HOM05D007536 ORTHO05D009390 1.3e-17 95.5 85 52.9
MELO3C010129.2 Cucumis melo HOM05D007536 ORTHO05D009390 2.2e-17 94.7 155 40.6
TWI38G0843 Tripterygium wilfordii HOM05D007536 ORTHO05D009390 8.5e-17 92.8 130 42.3
FAN05G1587 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.1e-16 92.4 126 42.9
A09p65820 Brassica napus HOM05D007536 ORTHO05D009390 1.9e-16 91.7 76 55.3
FvH4_6g01910 Fragaria vesca HOM05D007536 ORTHO05D009390 1.9e-16 91.7 110 46.4
FAN05G2252 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.9e-16 91.7 109 46.8
FAN14G0137 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.9e-16 91.7 110 46.4
FAN14G3895 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.9e-16 91.7 109 46.8
Eucgr.B02149 Eucalyptus grandis HOM05D007536 ORTHO05D009390 4.2e-16 90.5 93 49.5
Peaxi162Scf00528g00022 Petunia axillaris HOM05D007536 ORTHO05D009390 4.2e-16 90.5 112 43.8
Sed0012628 Sechium edule HOM05D007536 ORTHO05D009390 5.5e-16 90.1 72 59.7
Actinidia34755 Actinidia chinensis HOM05D007536 ORTHO05D009390 7.2e-16 89.7 77 54.5
Nitab4.5_0003780g0060 Nicotiana tabacum HOM05D007536 ORTHO05D009390 9.4e-16 89.4 130 39.2
Oeu000315.1 Olea europaea HOM05D007536 ORTHO05D009390 9.4e-16 89.4 123 40.7
QL03p030462 Quercus lobata HOM05D007536 ORTHO05D009390 1.2e-15 89.0 109 46.8
Nn1g02810 Nelumbo nucifera HOM05D007536 ORTHO05D009390 1.6e-15 88.6 68 58.8
Nitab4.5_0006737g0040 Nicotiana tabacum HOM05D007536 ORTHO05D009390 3.6e-15 87.4 109 42.2
vmacro10366 Vaccinium macrocarpon HOM05D007536 ORTHO05D009390 3.6e-15 87.4 119 40.3
PGR142G0030 Punica granatum HOM05D007536 ORTHO05D009390 4.7e-15 87.0 80 55.0
SalBow1G3025 Salvia bowleyana HOM05D007536 ORTHO05D009390 1.0e-14 85.9 90 46.7
Duzib177G0261 Durio zibethinus HOM05D007536 ORTHO05D009390 2.3e-14 84.7 112 45.5
Sed0002849 Sechium edule HOM05D007536 ORTHO05D009390 2.3e-14 84.7 113 41.6
CAN.G358.142 Capsicum annuum HOM05D007536 ORTHO05D009390 6.7e-14 83.2 79 50.6
CsaV3_1G045080 Cucumis sativus L. HOM05D007536 ORTHO05D009390 6.7e-14 83.2 117 42.7
Potri.019G019200 Populus trichocarpa HOM05D007536 ORTHO05D009390 8.8e-14 82.8 106 44.3
MSTRG.10543 Avicennia marina HOM05D007536 ORTHO05D009390 1.5e-13 82.0 82 48.8
Migut.L01514 Erythranthe guttata HOM05D007536 ORTHO05D009390 2.0e-13 81.6 117 39.3
MBI07_g16910_MAGBIO Magnolia biondii HOM05D007536 ORTHO05D009390 2.6e-13 81.3 71 53.5
Sabra19G0031900 Salix brachista HOM05D007536 ORTHO05D009390 2.6e-13 81.3 106 42.5
DCAR_023085 Daucus carota HOM05D007536 ORTHO05D009390 5.7e-13 80.1 117 40.2
Cc02_g08820 Coffea canephora HOM05D007536 ORTHO05D009390 9.7e-13 79.3 71 52.1
Lsat_1_v5_gn_8_24901 Lactuca sativa HOM05D007536 ORTHO05D009390 4.8e-12 77.0 63 55.6
FAN02G3965 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.1e-11 75.9 66 57.6
ECA233G3269 Erigeron canadensis HOM05D007536 ORTHO05D009390 4.1e-11 73.9 71 46.5
PSO210G0145 Papaver somniferum HOM05D007536 ORTHO05D009390 9.1e-11 72.8 70 50.0
MBI10_g13809_MAGBIO Magnolia biondii HOM05D007536 ORTHO05D009390 1.2e-10 72.4 62 51.6
Aqoxy5G00211 Aquilegia oxysepala HOM05D007536 ORTHO05D009390 2.0e-10 71.6 67 50.7
HanXRQChr07g0204491 Helianthus annuus HOM05D007536 ORTHO05D009390 5.0e-09 67.0 68 44.1
ATR0736G097 Amborella trichopoda HOM05D007536 ORTHO05D009390 7.2e-08 63.2 56 50.0
SGA_v2.0_scaffold21G09411 Striga asiatica HOM05D005874 ORTHO05D007206 1.8e-06 58.5 45 55.6


User provided reference genes

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