Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10010_v3 Cicer arietinum L. HOM05D005134 ORTHO05D006548 0.0e+00 1148.3 578 100.0
TPR.G32267 Trifolium pratense HOM05D005134 ORTHO05D006548 2.4e-142 510.0 312 81.1
Medtr1g079925 Medicago truncatula HOM05D005134 ORTHO05D006548 5.0e-124 449.1 267 82.0
Lj5g0005697 Lotus japonicus HOM05D005134 ORTHO05D006548 1.2e-114 417.9 309 69.3
Lalb_Chr02g0149171 Lupinus albus HOM05D005134 ORTHO05D006548 4.1e-110 402.9 308 67.2
Glyma.10G166800 Glycine max HOM05D005134 ORTHO05D006548 5.6e-107 392.5 286 69.6
VMungo0720G0573 Vigna mungo HOM05D005134 ORTHO05D006548 1.2e-106 391.3 276 71.4
Phvul.L001688 Phaseolus vulgaris HOM05D005134 ORTHO05D006548 6.0e-101 372.5 275 70.2
Psat6g143200 Pisum sativum HOM05D005134 ORTHO05D006548 1.7e-100 370.9 261 70.9
Glyma.20G222300 Glycine max HOM05D005134 ORTHO05D006548 2.6e-96 357.1 241 73.0
arahy.Tifrunner.gnm1.ann1.MCCA8X Arachis hypogaea HOM05D005134 ORTHO05D006548 8.7e-92 342.0 309 59.5
arahy.Tifrunner.gnm1.ann1.JQR6X4 Arachis hypogaea HOM05D005134 ORTHO05D006548 1.1e-91 341.7 309 59.5
MD12G1246100 Malus domestica HOM05D005134 ORTHO05D006548 4.9e-79 299.7 257 59.1
RcHm_v2.0_Chr3g0449951 Rosa chinensis HOM05D005134 ORTHO05D006548 3.2e-78 297.0 190 74.2
Cpa.g.sc162.33 Carica papaya HOM05D005134 ORTHO05D006548 4.2e-78 296.6 292 57.5
QL03p031652 Quercus lobata HOM05D005134 ORTHO05D006548 9.3e-78 295.4 260 57.3
QL09p031144 Quercus lobata HOM05D005134 ORTHO05D006548 9.3e-78 295.4 260 57.3
Prupe.6G348800 Prunus persica HOM05D005134 ORTHO05D006548 4.6e-77 293.1 243 59.3
FvH4_6g02180 Fragaria vesca HOM05D005134 ORTHO05D006548 7.9e-77 292.4 190 72.1
TAR636G3303 Trochodendron aralioides HOM05D005134 ORTHO05D006548 7.9e-77 292.4 268 56.0
MBI18_g13184_MAGBIO Magnolia biondii HOM05D005134 ORTHO05D006548 1.8e-76 291.2 180 74.4
TAR365G0228 Trochodendron aralioides HOM05D005134 ORTHO05D006548 2.3e-76 290.8 256 58.2
FAN05G3609 Fragaria x ananassa HOM05D005134 ORTHO05D006548 3.9e-76 290.0 190 71.6
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 6.7e-76 289.3 189 72.5
CANSAT54G0719 Cannabis sativa HOM05D005134 ORTHO05D006548 8.7e-76 288.9 264 59.8
CiPaw.08G117800 Carya illinoinensis HOM05D005134 ORTHO05D006548 1.1e-75 288.5 274 55.8
Gorai.013G187000 Gossypium raimondii HOM05D005134 ORTHO05D006548 1.5e-75 288.1 272 57.0
FAN02G2775 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.9e-75 287.7 190 71.1
FAN14G0587 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.5e-75 287.3 190 71.1
Gohir.D13G173500 Gossypium hirsutum HOM05D005134 ORTHO05D006548 2.5e-75 287.3 272 57.0
Dinv14615 Davidia involucrata HOM05D005134 ORTHO05D006548 4.3e-75 286.6 193 69.9
Duzib177G0085 Durio zibethinus HOM05D005134 ORTHO05D006548 7.4e-75 285.8 271 56.5
Manes.09G148800 Manihot esculenta HOM05D005134 ORTHO05D006548 1.3e-74 285.0 201 68.7
PGR004G2085 Punica granatum HOM05D005134 ORTHO05D006548 1.6e-74 284.6 185 70.8
TWI63G1834 Tripterygium wilfordii HOM05D005134 ORTHO05D006548 2.1e-74 284.3 204 65.7
GSVIVG01036192001 Vitis vinifera HOM05D005134 ORTHO05D006548 2.1e-74 284.3 273 55.7
Gohir.A13G168200 Gossypium hirsutum HOM05D005134 ORTHO05D006548 4.8e-74 283.1 260 58.8
Rhsim04G0183700 Rhododendron simsii HOM05D005134 ORTHO05D006548 4.8e-74 283.1 180 72.8
CSS0005455 Camellia sinensis var. sinensis HOM05D005134 ORTHO05D006548 8.2e-74 282.3 257 57.2
Actinidia04451 Actinidia chinensis HOM05D005134 ORTHO05D006548 1.8e-73 281.2 186 71.0
FAN05G5817 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.4e-73 280.8 190 69.5
CsaV3_2G003750 Cucumis sativus L. HOM05D005134 ORTHO05D006548 4.0e-73 280.0 189 69.8
Sabra13G0042100 Salix brachista HOM05D005134 ORTHO05D006548 5.3e-73 279.6 221 62.0
Eucgr.H04250 Eucalyptus grandis HOM05D005134 ORTHO05D006548 9.0e-73 278.9 203 68.0
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla HOM05D005134 ORTHO05D006548 9.0e-73 278.9 186 69.9
Aa31LG2G12350 Aethionema arabicum HOM05D005134 ORTHO05D006548 1.2e-72 278.5 203 65.0
GSVIVG01027796001 Vitis vinifera HOM05D005134 ORTHO05D006548 1.2e-72 278.5 213 63.4
Thecc.05G272900 Theobroma cacao HOM05D005134 ORTHO05D006548 1.5e-72 278.1 258 57.4
Eucgr.H04279 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.0e-72 277.7 185 71.9
FAN09G4497 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.0e-72 277.7 193 68.4
Nitab4.5_0011884g0010 Nicotiana tabacum HOM05D005134 ORTHO05D006548 2.0e-72 277.7 186 66.7
Lj3A700T11 Lonicera japonica HOM05D005134 ORTHO05D006548 2.6e-72 277.3 186 71.0
Potri.013G045800 Populus trichocarpa HOM05D005134 ORTHO05D006548 2.6e-72 277.3 180 72.8
Sc09g0004160 Simmondsia chinensis HOM05D005134 ORTHO05D006548 2.6e-72 277.3 191 69.1
THA.LOC104807079 Tarenaya hassleriana HOM05D005134 ORTHO05D006548 2.6e-72 277.3 287 52.3
MELO3C004420.2 Cucumis melo HOM05D005134 ORTHO05D006548 4.5e-72 276.6 189 68.8
Peaxi162Scf00409g00421 Petunia axillaris HOM05D005134 ORTHO05D006548 4.5e-72 276.6 187 66.8
Nitab4.5_0000044g0220 Nicotiana tabacum HOM05D005134 ORTHO05D006548 5.8e-72 276.2 186 66.7
Aqoxy5G00231 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 7.6e-72 275.8 186 71.0
PSO173G0035 Papaver somniferum HOM05D005134 ORTHO05D006548 7.6e-72 275.8 199 65.3
MSTRG.21911 Avicennia marina HOM05D005134 ORTHO05D006548 1.0e-71 275.4 190 67.4
Nn1g02742 Nelumbo nucifera HOM05D005134 ORTHO05D006548 1.0e-71 275.4 273 55.3
vmacro08495 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 1.0e-71 275.4 183 70.5
HPP92_015212 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.7e-71 274.6 193 68.4
HPP92_025481 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.7e-71 274.6 218 63.3
Sed0016660 Sechium edule HOM05D005134 ORTHO05D006548 3.8e-71 273.5 206 66.0
CDE02G0996 Ceratophyllum demersum HOM05D005134 ORTHO05D006548 6.5e-71 272.7 205 64.4
ClCG02G016990 Citrullus lanatus HOM05D005134 ORTHO05D006548 6.5e-71 272.7 188 68.6
Potri.019G017900 Populus trichocarpa HOM05D005134 ORTHO05D006548 1.1e-70 271.9 253 55.7
COL.COLO4_15462 Corchorus olitorius HOM05D005134 ORTHO05D006548 1.9e-70 271.2 178 70.2
PSO170G6910 Papaver somniferum HOM05D005134 ORTHO05D006548 2.5e-70 270.8 182 67.0
Ciclev10001967m.g Citrus clementina HOM05D005134 ORTHO05D006548 3.2e-70 270.4 180 70.0
AL3G53380 Arabidopsis lyrata HOM05D005134 ORTHO05D006548 4.2e-70 270.0 187 67.9
Thhalv10027851m.g Eutrema salsugineum HOM05D005134 ORTHO05D006548 7.1e-70 269.2 187 67.4
Sopen09g032960 Solanum pennellii HOM05D005134 ORTHO05D006548 9.3e-70 268.9 210 61.0
Carub.0003s3480 Capsella rubella HOM05D005134 ORTHO05D006548 1.2e-69 268.5 187 68.4
SpUn0001_1010 Schrenkiella parvula HOM05D005134 ORTHO05D006548 1.6e-69 268.1 199 65.8
Cc03_g05430 Coffea canephora HOM05D005134 ORTHO05D006548 2.1e-69 267.7 178 68.5
Lsat_1_v5_gn_3_118860 Lactuca sativa HOM05D005134 ORTHO05D006548 3.5e-69 266.9 182 67.0
Sed0011924 Sechium edule HOM05D005134 ORTHO05D006548 3.5e-69 266.9 206 63.1
CARHR110960 Cardamine hirsuta HOM05D005134 ORTHO05D006548 4.6e-69 266.5 187 66.8
Migut.N00267 Erythranthe guttata HOM05D005134 ORTHO05D006548 2.3e-68 264.2 188 69.1
Atru.chr6.1561 Acer truncatum HOM05D005134 ORTHO05D006548 3.0e-68 263.8 203 61.6
AUR62002121 Chenopodium quinoa HOM05D005134 ORTHO05D006548 3.0e-68 263.8 185 66.5
Rhsim13G0009400 Rhododendron simsii HOM05D005134 ORTHO05D006548 3.0e-68 263.8 245 55.9
ATR0730G220 Amborella trichopoda HOM05D005134 ORTHO05D006548 3.9e-68 263.5 189 67.2
CAN.G793.56 Capsicum annuum HOM05D005134 ORTHO05D006548 3.9e-68 263.5 186 66.7
Aqoxy2G03635 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 5.1e-68 263.1 273 51.3
BcaB04g20137 Brassica carinata HOM05D005134 ORTHO05D006548 5.1e-68 263.1 203 63.5
AUR62028240 Chenopodium quinoa HOM05D005134 ORTHO05D006548 8.7e-68 262.3 187 66.3
Zm00001eb210280 Zea mays HOM05D005134 ORTHO05D006548 8.7e-68 262.3 202 64.4
Manes.08G138000 Manihot esculenta HOM05D005134 ORTHO05D006548 1.1e-67 261.9 202 65.3
ECA240G2747 Erigeron canadensis HOM05D005134 ORTHO05D006548 1.5e-67 261.5 183 68.3
PGSC0003DMG400017174 Solanum tuberosum HOM05D005134 ORTHO05D006548 1.9e-67 261.2 210 60.0
Actinidia34743 Actinidia chinensis HOM05D005134 ORTHO05D006548 2.5e-67 260.8 316 48.1
vmacro02444 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 3.3e-67 260.4 185 66.5
AT2G20410 Arabidopsis thaliana HOM05D005134 ORTHO05D006548 1.3e-66 258.5 197 63.5
EL10Ac3g05020 Beta vulgaris HOM05D005134 ORTHO05D006548 1.3e-66 258.5 223 58.3
Haze_04438 Corylus avellana HOM05D005134 ORTHO05D006548 1.3e-66 258.5 217 60.8
Hund06912 Selenicereus undatus HOM05D005134 ORTHO05D006548 2.2e-66 257.7 230 57.8
BcaC09g49624 Brassica carinata HOM05D005134 ORTHO05D006548 2.8e-66 257.3 222 58.6
SalBow3G1367 Salvia bowleyana HOM05D005134 ORTHO05D006548 2.8e-66 257.3 178 66.3
GSVIVG01027798001 Vitis vinifera HOM05D005134 ORTHO05D006548 2.8e-66 257.3 167 70.7
Oeu028977.1 Olea europaea HOM05D005134 ORTHO05D006548 4.8e-66 256.5 180 63.9
C01p34370 Brassica napus HOM05D005134 ORTHO05D006548 6.3e-66 256.1 222 58.1
BolC1t03407H Brassica oleracea HOM05D005134 ORTHO05D006548 6.3e-66 256.1 222 58.1
EL10Ac4g09067 Beta vulgaris HOM05D005134 ORTHO05D006548 4.1e-65 253.4 283 49.8
SEGI_05528 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 2.6e-64 250.8 198 60.1
Ah.04g155980 Amaranthus hybridus HOM05D005134 ORTHO05D006548 3.4e-64 250.4 180 66.7
HanXRQChr03g0091791 Helianthus annuus HOM05D005134 ORTHO05D006548 3.4e-64 250.4 230 56.1
SHI23170 Sapria himalayana HOM05D005134 ORTHO05D006548 7.6e-64 249.2 192 62.5
Solyc09g090050.4 Solanum lycopersicum HOM05D005134 ORTHO05D006548 8.5e-63 245.7 161 67.1
unitig_0.g910 Utricularia gibba HOM05D005134 ORTHO05D006548 1.2e-61 241.9 179 64.2
Hund03036 Selenicereus undatus HOM05D005134 ORTHO05D006548 2.7e-61 240.7 221 54.3
Eucgr.H04252 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.7e-55 221.5 198 60.6
AUR62040940 Chenopodium quinoa HOM05D005134 ORTHO05D006548 2.5e-54 217.6 169 59.8
DCAR_002321 Daucus carota HOM05D005134 ORTHO05D006548 2.0e-51 208.0 214 50.9
Ah.06g191930 Amaranthus hybridus HOM05D005134 ORTHO05D006548 5.7e-51 206.5 184 58.7
MD04G1229000 Malus domestica HOM05D005134 ORTHO05D006548 1.7e-50 204.9 288 43.8
Mapoly0025s0138 Marchantia polymorpha HOM05D005134 ORTHO05D006548 1.1e-49 202.2 215 47.9
Dinv29871 Davidia involucrata HOM05D005134 ORTHO05D006548 3.1e-49 200.7 204 52.9
HPP92_015224 Vanilla planifolia HOM05D005134 ORTHO05D006548 9.1e-49 199.1 199 54.8
AUR62004857 Chenopodium quinoa HOM05D005134 ORTHO05D006548 3.2e-46 190.7 194 53.1
Eucgr.H04289 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.0e-43 181.4 194 51.5
SEGI_11048 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 2.8e-42 177.6 167 52.7
SMO367G0112 Selaginella moellendorffii HOM05D005134 ORTHO05D006548 5.0e-39 166.8 146 55.5
Actinidia01853 Actinidia chinensis HOM05D005134 ORTHO05D006548 6.7e-36 156.4 185 46.5
Os03g0860000 Oryza sativa ssp. japonica HOM05D005134 ORTHO05D006548 8.8e-36 156.0 89 76.4
Actinidia38945 Actinidia chinensis HOM05D005134 ORTHO05D006548 2.2e-34 151.4 83 78.3
Eucgr.H04247 Eucalyptus grandis HOM05D005134 ORTHO05D006548 6.3e-34 149.8 136 55.1
SGA_v2.0_scaffold308G48086 Striga asiatica HOM05D005134 ORTHO05D006548 5.3e-33 146.7 88 67.0
vmacro02443 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 4.1e-25 120.6 81 67.9
AagrBONN_evm.TU.Sc2ySwM_344.1164 Anthoceros agrestis HOM05D005134 ORTHO05D006548 2.7e-24 117.9 89 57.3
Eucgr.H04286 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.2e-21 109.0 125 47.2
Cre16.g655100 Chlamydomonas reinhardtii HOM05D005134 ORTHO05D006548 4.7e-21 107.1 147 37.4
Duzib177G1154 Durio zibethinus HOM05D005134 ORTHO05D013855 4.1e-17 94.0 211 35.5
FAN14G5434 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.1e-13 81.6 94 50.0
Manes.15G040000 Manihot esculenta HOM05D005134 ORTHO05D006548 4.0e-12 77.4 56 66.1
RcHm_v2.0_Chr6g0274061 Rosa chinensis HOM05D005134 ORTHO05D006548 1.1e-06 59.3 63 52.4
ATR0598G211 Amborella trichopoda HOM05D005134 ORTHO05D067863 4.3e-06 57.4 72 43.1


User provided reference genes

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