Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 1.1e-218 763.1 399 100.0
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 4.0e-181 638.3 400 85.5
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 5.1e-176 621.3 401 84.0
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 1.6e-174 616.3 402 84.1
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 6.5e-163 577.8 418 77.0
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 7.9e-161 570.9 401 78.1
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 2.3e-160 569.3 405 78.8
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 3.3e-159 565.5 416 75.5
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 4.2e-154 548.5 404 75.7
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 9.4e-154 547.4 400 74.2
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.4e-152 543.5 404 75.0
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 1.2e-140 503.8 411 67.4
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 1.9e-138 496.5 412 65.0
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 4.2e-138 495.4 414 67.1
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 9.4e-138 494.2 408 66.9
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 1.2e-137 493.8 411 65.2
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 3.6e-137 492.3 411 65.0
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 8.0e-137 491.1 408 68.1
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 6.8e-136 488.0 407 65.8
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 8.8e-136 487.6 413 65.4
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 3.4e-135 485.7 402 66.9
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 4.4e-135 485.3 414 64.7
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 2.8e-134 482.6 416 64.9
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 8.3e-134 481.1 418 64.6
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 2.4e-133 479.6 424 63.9
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 4.5e-132 475.3 405 65.7
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 4.5e-132 475.3 423 63.8
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 5.9e-132 474.9 404 64.9
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 7.7e-132 474.6 358 71.2
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 6.5e-131 471.5 414 64.3
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 1.1e-130 470.7 407 64.9
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 4.2e-130 468.8 415 64.1
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 1.6e-129 466.8 407 63.6
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 1.6e-129 466.8 414 61.6
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 6.8e-128 461.5 405 63.7
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 9.8e-127 457.6 409 63.6
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 8.3e-126 454.5 405 64.2
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 8.3e-126 454.5 405 62.5
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 2.4e-125 453.0 411 62.3
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 4.1e-125 452.2 404 63.6
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 4.1e-125 452.2 409 63.6
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 9.1e-125 451.1 408 62.3
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 2.0e-124 449.9 407 62.7
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 4.5e-124 448.7 401 61.8
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 5.9e-124 448.4 427 60.0
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 1.3e-123 447.2 413 61.7
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 1.3e-123 447.2 314 80.9
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.3e-123 446.4 422 60.2
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.3e-123 446.4 422 59.7
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 1.1e-122 444.1 415 60.5
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 1.9e-122 443.4 404 61.6
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 2.5e-122 443.0 336 71.4
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 3.3e-122 442.6 521 52.2
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 9.5e-122 441.0 431 61.0
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 1.6e-121 440.3 427 60.9
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 1.6e-121 440.3 439 60.6
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 2.1e-121 439.9 414 61.1
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 2.1e-121 439.9 406 61.6
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 2.8e-121 439.5 402 62.7
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 3.6e-121 439.1 408 60.8
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 4.7e-121 438.7 418 60.3
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.0e-120 437.6 422 59.2
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 1.8e-120 436.8 437 59.7
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 6.8e-120 434.9 402 62.4
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 8.9e-120 434.5 414 61.1
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 8.9e-120 434.5 422 59.0
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 1.5e-119 433.7 404 61.1
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 5.7e-119 431.8 432 58.3
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 9.8e-119 431.0 429 58.5
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 9.8e-119 431.0 407 60.7
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 1.7e-118 430.3 410 61.0
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 2.9e-118 429.5 427 58.1
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 6.4e-118 428.3 406 60.1
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 7.0e-117 424.9 432 60.4
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 2.7e-116 422.9 430 57.9
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 2.7e-116 422.9 431 58.0
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 3.5e-116 422.5 402 59.7
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 5.9e-116 421.8 429 59.2
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 7.8e-116 421.4 351 66.1
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 7.8e-116 421.4 407 60.9
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 7.8e-116 421.4 348 66.4
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 1.3e-115 420.6 408 58.1
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 3.9e-115 419.1 438 57.5
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 5.0e-115 418.7 441 57.1
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 8.6e-115 417.9 412 58.3
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.1e-114 417.5 426 56.8
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 1.5e-114 417.2 427 56.9
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.9e-114 416.8 427 56.7
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 3.1e-112 409.5 414 56.5
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 3.1e-112 409.5 406 60.6
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 6.8e-112 408.3 437 57.4
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 1.7e-110 403.7 411 57.4
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 4.1e-109 399.1 428 55.1
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 9.2e-109 397.9 427 55.3
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 1.2e-108 397.5 427 55.3
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 6.2e-105 385.2 406 57.4
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 3.1e-104 382.9 430 55.1
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 7.1e-101 371.7 425 51.8
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 1.1e-96 357.8 327 60.9
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 4.1e-93 345.9 354 56.2
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 2.7e-92 343.2 340 55.3
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 1.5e-90 337.4 309 60.8
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 4.7e-89 332.4 323 60.7
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 3.1e-88 329.7 271 65.3
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 3.0e-75 286.6 398 43.2
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 8.7e-75 285.0 264 57.6
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 5.8e-71 272.3 418 42.6
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 3.9e-67 259.6 329 46.2
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.0e-63 247.3 302 49.7
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 4.9e-62 242.7 209 64.6
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 7.2e-53 212.2 388 37.9
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 1.5e-42 177.9 126 73.8
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 4.3e-42 176.4 201 52.2
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 2.6e-39 167.2 128 66.4
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.6e-34 150.6 88 79.5
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 1.3e-22 111.7 347 28.5
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 2.2e-22 110.9 483 25.7
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 3.4e-18 97.1 141 50.4
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 1.4e-16 91.7 79 63.3
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 3.7e-09 67.0 322 24.2
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 6.3e-09 66.2 66 53.0
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 8.3e-09 65.9 173 32.4
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 3.1e-08 63.9 46 67.4
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 5.4e-08 63.2 46 65.2
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 9.2e-08 62.4 118 37.3


User provided reference genes

Program Settings