Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10004_v3 Cicer arietinum L. HOM05D000236 ORTHO05D147922 3.4e-65 251.5 128 100.0
Medtr1g079780 Medicago truncatula HOM05D000236 ORTHO05D005787 1.7e-24 116.3 130 58.5
Psat6g142280 Pisum sativum HOM05D000236 ORTHO05D005787 2.9e-24 115.5 132 59.1
Glyma.03G251800 Glycine max HOM05D000236 ORTHO05D005787 1.3e-11 73.6 103 51.5
Phvul.006G106500 Phaseolus vulgaris HOM05D000236 ORTHO05D005787 1.7e-11 73.2 108 49.1
Medtr7g116320 Medicago truncatula HOM05D000236 ORTHO05D005787 8.3e-11 70.9 117 46.2
TPR.G10260 Trifolium pratense HOM05D000236 ORTHO05D005787 8.3e-11 70.9 78 62.8
VMungo0540G2126 Vigna mungo HOM05D000236 ORTHO05D005787 1.1e-10 70.5 108 47.2
Glyma.19G249200 Glycine max HOM05D000236 ORTHO05D005787 3.1e-10 68.9 108 47.2
Ca_09467_v3 Cicer arietinum L. HOM05D000236 ORTHO05D005787 4.1e-10 68.6 112 46.4
Lj1g0020846 Lotus japonicus HOM05D000236 ORTHO05D005787 1.1e-07 60.5 140 40.0
Sed0020420 Sechium edule HOM05D000236 ORTHO05D005787 3.2e-07 58.9 123 37.4
PGR142G3579 Punica granatum HOM05D000236 ORTHO05D005787 4.2e-07 58.5 147 35.4
TPR.G7000 Trifolium pratense HOM05D000236 ORTHO05D005787 5.5e-07 58.2 99 41.4
Cfa006321 Carpinus fangiana HOM05D000236 ORTHO05D005787 9.4e-07 57.4 135 38.5
arahy.Tifrunner.gnm1.ann1.RHY2RN Arachis hypogaea HOM05D000236 ORTHO05D005787 1.2e-06 57.0 133 36.8
Gohir.A11G250900 Gossypium hirsutum HOM05D000236 ORTHO05D005787 2.1e-06 56.2 145 34.5
MD12G1245000 Malus domestica HOM05D000236 ORTHO05D005787 2.1e-06 56.2 143 35.0
Haze_04468 Corylus avellana HOM05D000236 ORTHO05D005787 2.7e-06 55.8 137 35.8
arahy.Tifrunner.gnm1.ann1.CSXK13 Arachis hypogaea HOM05D000236 ORTHO05D005787 3.6e-06 55.5 133 36.1
Prupe.6G347600 Prunus persica HOM05D000236 ORTHO05D005787 3.6e-06 55.5 113 39.8
Gohir.A11G299100 Gossypium hirsutum HOM05D000236 ORTHO05D005787 4.7e-06 55.1 115 38.3
Dinv06986 Davidia involucrata HOM05D000236 ORTHO05D005787 6.1e-06 54.7 115 36.5
Gorai.007G345200 Gossypium raimondii HOM05D000236 ORTHO05D005787 6.1e-06 54.7 116 37.1
Lj5g0008230 Lotus japonicus HOM05D000236 ORTHO05D005787 8.0e-06 54.3 118 40.7
GSVIVG01036214001 Vitis vinifera HOM05D000236 ORTHO05D005787 8.0e-06 54.3 111 37.8


User provided reference genes

Program Settings