Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 5.1e-69 264.6 169 100.0
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 5.5e-55 218.0 172 83.7
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 1.0e-53 213.8 173 72.3
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 8.8e-53 210.7 170 76.5
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 1.2e-52 210.3 169 75.7
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 2.0e-52 209.5 169 76.3
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 5.7e-52 208.0 169 82.8
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 9.7e-52 207.2 170 78.8
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 2.6e-44 182.6 168 66.1
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 9.1e-42 174.1 170 61.8
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 9.1e-42 174.1 170 61.8
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 1.2e-41 173.7 162 63.0
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 2.7e-41 172.6 169 60.4
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 2.7e-41 172.6 160 61.9
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 2.7e-41 172.6 159 62.9
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 5.9e-41 171.4 168 60.7
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 5.9e-41 171.4 169 68.6
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 1.0e-40 170.6 168 58.3
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 1.7e-40 169.9 168 60.7
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 2.3e-40 169.5 169 59.2
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 3.8e-40 168.7 160 60.6
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.1e-39 167.2 166 63.9
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 4.2e-39 165.2 166 63.3
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 5.5e-39 164.9 169 59.2
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 7.2e-39 164.5 161 58.4
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 7.2e-39 164.5 172 59.9
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 9.5e-39 164.1 169 58.0
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 1.2e-38 163.7 170 58.2
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 6.1e-38 161.4 172 58.1
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 6.1e-38 161.4 162 59.3
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 6.1e-38 161.4 157 63.1
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 6.1e-38 161.4 153 61.4
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 8.0e-38 161.0 160 58.8
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 8.0e-38 161.0 159 57.9
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 5.2e-37 158.3 169 58.6
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 6.8e-37 157.9 162 58.0
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 8.9e-37 157.5 169 57.4
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 8.9e-37 157.5 161 57.1
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 7.5e-36 154.5 162 55.6
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 7.5e-36 154.5 160 57.5
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 9.8e-36 154.1 158 63.3
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 1.3e-35 153.7 161 57.1
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 2.2e-35 152.9 162 54.9
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 2.2e-35 152.9 153 59.5
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 2.2e-35 152.9 171 56.7
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 2.8e-35 152.5 162 54.9
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 2.8e-35 152.5 149 61.7
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 6.3e-35 151.4 158 57.6
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 6.3e-35 151.4 163 58.3
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.1e-34 150.6 162 56.2
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 1.4e-34 150.2 170 54.7
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 1.8e-34 149.8 154 55.8
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 2.4e-34 149.4 149 59.7
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 3.1e-34 149.1 155 57.4
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 3.1e-34 149.1 165 67.9
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 2.0e-33 146.4 154 55.2
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 2.7e-33 146.0 156 54.5
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 3.5e-33 145.6 161 52.2
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 4.5e-33 145.2 161 53.4
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 4.5e-33 145.2 170 54.7
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 7.8e-33 144.4 167 53.9
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 7.8e-33 144.4 167 53.9
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 7.8e-33 144.4 162 53.7
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 7.8e-33 144.4 170 53.5
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 1.0e-32 144.1 167 53.3
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 1.7e-32 143.3 94 78.7
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 1.7e-32 143.3 163 63.2
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 2.3e-32 142.9 165 54.5
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 2.9e-32 142.5 169 53.8
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.9e-32 142.5 169 53.8
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 5.0e-32 141.7 162 64.8
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.1e-31 140.6 149 57.7
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 1.5e-31 140.2 165 53.3
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 2.5e-31 139.4 168 53.6
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 2.5e-31 139.4 168 53.6
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 2.5e-31 139.4 165 58.8
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.3e-31 139.0 169 53.3
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 7.3e-31 137.9 161 51.6
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 9.5e-31 137.5 149 68.5
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 9.5e-31 137.5 169 61.5
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 1.2e-30 137.1 162 52.5
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 1.6e-30 136.7 170 58.8
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 2.8e-30 136.0 169 51.5
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 4.7e-30 135.2 161 51.6
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 6.1e-30 134.8 96 71.9
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 8.0e-30 134.4 162 51.2
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 8.0e-30 134.4 162 51.2
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 1.0e-29 134.0 161 51.6
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 1.8e-29 133.3 162 59.3
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 3.1e-29 132.5 167 48.5
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 4.0e-29 132.1 162 50.0
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 4.0e-29 132.1 162 50.0
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 9.8e-28 127.5 95 68.4
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 3.2e-26 122.5 160 55.6
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 1.2e-25 120.6 147 66.0
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 2.7e-25 119.4 98 62.2
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 2.7e-25 119.4 110 71.8
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 4.6e-25 118.6 162 46.9
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 1.9e-23 113.2 181 42.0
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 7.3e-23 111.3 163 44.2
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 1.6e-22 110.2 101 62.4
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 1.6e-22 110.2 60 96.7
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 3.6e-22 109.0 152 46.1
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 4.7e-22 108.6 81 71.6
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 8.0e-22 107.8 160 43.8
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 8.0e-22 107.8 143 46.9
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 1.4e-21 107.1 167 45.5
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 5.2e-21 105.1 167 45.5
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 2.6e-20 102.8 124 66.1
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 1.7e-19 100.1 86 61.6
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.7e-19 99.0 163 42.3
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.7e-19 99.0 159 41.5
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 6.4e-19 98.2 157 42.0
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.9e-18 96.7 157 42.0
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.9e-18 96.7 159 42.1
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.9e-18 96.7 92 58.7
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 5.1e-16 88.6 149 40.9
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 2.8e-14 82.8 166 39.8
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 6.2e-14 81.6 94 48.9
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 3.1e-13 79.3 125 43.2
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 6.4e-11 71.6 102 44.1
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.4e-10 69.7 105 42.9
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 6.0e-09 65.1 153 30.7
PRCOL_00005394 Prasinoderma coloniale HOM05D006168 ORTHO05D007602 3.3e-07 59.3 102 38.2
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 1.2e-06 57.4 85 42.4


User provided reference genes

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