Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09799_v3 Cicer arietinum L. HOM05D006910 ORTHO05D008937 2.5e-143 512.7 320 100.0
Psat6g131280 Pisum sativum HOM05D006910 ORTHO05D008937 1.6e-81 307.4 319 64.6
Medtr1g073230 Medicago truncatula HOM05D006910 ORTHO05D008937 5.1e-80 302.4 329 61.4
TPR.G18548 Trifolium pratense HOM05D006910 ORTHO05D008937 5.1e-80 302.4 333 68.5
Lj5g0027299 Lotus japonicus HOM05D006910 ORTHO05D008937 6.0e-65 252.3 348 55.7
Glyma.20G199800 Glycine max HOM05D006910 ORTHO05D008937 7.9e-65 251.9 327 57.8
Glyma.10G190700 Glycine max HOM05D006910 ORTHO05D008937 2.1e-57 227.3 325 53.8
VMungo0720G1174 Vigna mungo HOM05D006910 ORTHO05D008937 1.7e-54 217.6 334 52.7
Phvul.011G133545 Phaseolus vulgaris HOM05D006910 ORTHO05D008937 8.2e-54 215.3 334 50.9
arahy.Tifrunner.gnm1.ann1.DX8ZNF Arachis hypogaea HOM05D006910 ORTHO05D008937 1.3e-43 181.4 345 47.8
arahy.Tifrunner.gnm1.ann1.YFRU1Z Arachis hypogaea HOM05D006910 ORTHO05D008937 6.5e-43 179.1 345 47.2
Potri.010G065400 Populus trichocarpa HOM05D006910 ORTHO05D008937 1.4e-29 134.8 308 40.6
QL06p021124 Quercus lobata HOM05D006910 ORTHO05D008937 1.8e-29 134.4 333 39.0
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 2.4e-29 134.0 339 39.8
Lalb_Chr06g0169541 Lupinus albus HOM05D006910 ORTHO05D008937 3.1e-29 133.7 227 40.1
Manes.03G158500 Manihot esculenta HOM05D006910 ORTHO05D008937 5.9e-28 129.4 337 38.6
CiPaw.01G177500 Carya illinoinensis HOM05D006910 ORTHO05D008937 1.3e-27 128.3 281 44.8
Ciclev10004771m.g Citrus clementina HOM05D006910 ORTHO05D008937 3.8e-27 126.7 341 41.1
Atru.chr4.1910 Acer truncatum HOM05D006910 ORTHO05D008937 1.9e-26 124.4 351 39.0
DCAR_027350 Daucus carota HOM05D006910 ORTHO05D008937 3.2e-26 123.6 314 38.5
Haze_11463 Corylus avellana HOM05D006910 ORTHO05D008937 5.5e-26 122.9 359 39.3
Sabra08G0131500 Salix brachista HOM05D006910 ORTHO05D008937 5.5e-26 122.9 313 38.3
MD16G1226800 Malus domestica HOM05D006910 ORTHO05D008937 2.7e-25 120.6 328 38.4
Sabra10G0041700 Salix brachista HOM05D006910 ORTHO05D008937 8.0e-25 119.0 318 37.1
CANSAT78G1020 Cannabis sativa HOM05D006910 ORTHO05D008937 4.0e-24 116.7 306 38.6
MD13G1221900 Malus domestica HOM05D006910 ORTHO05D008937 4.0e-24 116.7 321 38.6
RcHm_v2.0_Chr4g0395481 Rosa chinensis HOM05D006910 ORTHO05D008937 6.8e-24 115.9 321 37.7
Hund20492 Selenicereus undatus HOM05D006910 ORTHO05D008937 2.0e-23 114.4 313 37.1
Thecc.04G265400 Theobroma cacao HOM05D006910 ORTHO05D008937 1.3e-22 111.7 334 37.7
TWI53G1612 Tripterygium wilfordii HOM05D006910 ORTHO05D008937 1.3e-22 111.7 301 45.5
Duzib151G0386 Durio zibethinus HOM05D006910 ORTHO05D008937 2.2e-22 110.9 201 38.3
Actinidia39932 Actinidia chinensis HOM05D006910 ORTHO05D008937 2.8e-22 110.5 304 40.8
vmacro15481 Vaccinium macrocarpon HOM05D006910 ORTHO05D008937 2.8e-22 110.5 320 40.6
Peaxi162Scf00319g00521 Petunia axillaris HOM05D006910 ORTHO05D008937 3.7e-22 110.2 355 35.5
Potri.008G172200 Populus trichocarpa HOM05D006910 ORTHO05D008937 4.8e-22 109.8 325 36.9
FAN17G1396 Fragaria x ananassa HOM05D006910 ORTHO05D008937 1.1e-21 108.6 322 38.2
Cpa.g.sc59.4 Carica papaya HOM05D006910 ORTHO05D008937 5.4e-21 106.3 332 37.7
Nitab4.5_0006344g0050 Nicotiana tabacum HOM05D006910 ORTHO05D008937 5.4e-21 106.3 339 36.3
FvH4_4g04670 Fragaria vesca HOM05D006910 ORTHO05D008937 9.1e-21 105.5 324 38.3
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.2e-20 105.1 354 28.5
Dinv29800 Davidia involucrata HOM05D006910 ORTHO05D008937 2.7e-20 104.0 245 38.4
PGR031G1888 Punica granatum HOM05D006910 ORTHO05D008937 2.7e-20 104.0 280 40.7
FAN12G3461 Fragaria x ananassa HOM05D006910 ORTHO05D008937 3.5e-20 103.6 334 29.6
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 5.9e-20 102.8 336 36.6
COL.COLO4_15971 Corchorus olitorius HOM05D006910 ORTHO05D008937 5.9e-20 102.8 318 37.1
AUR62015241 Chenopodium quinoa HOM05D006910 ORTHO05D008937 7.7e-20 102.4 314 38.9
EL10Ac3g06675 Beta vulgaris HOM05D006910 ORTHO05D008937 2.3e-19 100.9 322 37.0
FAN22G1859 Fragaria x ananassa HOM05D006910 ORTHO05D008937 2.3e-19 100.9 312 38.5
Rhsim02G0044100 Rhododendron simsii HOM05D006910 ORTHO05D008937 6.6e-19 99.4 324 38.6
Sc13g0003110 Simmondsia chinensis HOM05D006910 ORTHO05D008937 6.6e-19 99.4 208 43.8
PGR031G1691 Punica granatum HOM05D006910 ORTHO05D008937 8.6e-19 99.0 273 40.7
Hma1.2p1_0112F.1_g054780 Hydrangea macrophylla HOM05D006910 ORTHO05D008937 1.1e-18 98.6 331 36.0
GSVIVG01027919001 Vitis vinifera HOM05D006910 ORTHO05D008937 2.5e-18 97.4 358 39.9
Lj6C621T3 Lonicera japonica HOM05D006910 ORTHO05D008937 3.3e-18 97.1 329 42.9
Nitab4.5_0000355g0050 Nicotiana tabacum HOM05D006910 ORTHO05D008937 1.6e-17 94.7 332 34.0
Cc03_g06380 Coffea canephora HOM05D006910 ORTHO05D008937 1.8e-16 91.3 349 33.5
Gorai.011G179800 Gossypium raimondii HOM05D006910 ORTHO05D008937 7.5e-15 85.9 334 34.7
CAN.G638.37 Capsicum annuum HOM05D006910 ORTHO05D008937 1.7e-14 84.7 336 34.5
Ah.13g074730 Amaranthus hybridus HOM05D006910 ORTHO05D008937 2.8e-14 84.0 298 35.9
Eucgr.H00126 Eucalyptus grandis HOM05D006910 ORTHO05D008937 2.8e-14 84.0 224 40.6
Gohir.A10G107300 Gossypium hirsutum HOM05D006910 ORTHO05D008937 3.2e-13 80.5 334 34.1
CsaV3_3G011640 Cucumis sativus L. HOM05D006910 ORTHO05D008937 9.2e-13 79.0 314 28.0
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.2e-12 78.6 201 30.8
ClCG05G003960 Citrullus lanatus HOM05D006910 ORTHO05D008937 1.2e-12 78.6 313 27.5
Sopen09g033910 Solanum pennellii HOM05D006910 ORTHO05D008937 2.0e-12 77.8 338 34.0
PGSC0003DMG400001551 Solanum tuberosum HOM05D006910 ORTHO05D008937 2.7e-12 77.4 337 34.1
Sopen03g001720 Solanum pennellii HOM05D006910 ORTHO05D008937 3.5e-12 77.0 289 36.3
Nitab4.5_0000592g0430 Nicotiana tabacum HOM05D006910 ORTHO05D008937 1.0e-11 75.5 209 32.1
Thhalv10008199m.g Eutrema salsugineum HOM05D006910 ORTHO05D008937 2.3e-11 74.3 214 30.8
PGSC0003DMG400013458 Solanum tuberosum HOM05D006910 ORTHO05D008937 2.9e-11 73.9 343 33.2
Dinv27116 Davidia involucrata HOM05D006910 ORTHO05D008937 5.0e-11 73.2 341 31.4
Gohir.D10G160000 Gossypium hirsutum HOM05D006910 ORTHO05D008937 6.6e-11 72.8 334 34.7
Solyc09g090930.3 Solanum lycopersicum HOM05D006910 ORTHO05D008937 8.6e-11 72.4 338 33.4
Carub.0001s0374 Capsella rubella HOM05D006910 ORTHO05D008937 1.1e-10 72.0 281 25.3
BraA10t42564Z Brassica rapa HOM05D006910 ORTHO05D008937 1.5e-10 71.6 325 24.0
CAN.G524.13 Capsicum annuum HOM05D006910 ORTHO05D008937 1.5e-10 71.6 336 32.7
A10p02950 Brassica napus HOM05D006910 ORTHO05D008937 1.9e-10 71.2 332 25.3
Peaxi162Scf01044g00225 Petunia axillaris HOM05D006910 ORTHO05D008937 1.9e-10 71.2 336 31.8
AT1G04530 Arabidopsis thaliana HOM05D006910 ORTHO05D008937 1.2e-09 68.6 166 29.5
THA.LOC104801064 Tarenaya hassleriana HOM05D006910 ORTHO05D008937 1.2e-09 68.6 286 23.4
Oeu011215.1 Olea europaea HOM05D006910 ORTHO05D008937 3.6e-09 67.0 280 40.0
Sp1g03360 Schrenkiella parvula HOM05D006910 ORTHO05D008937 3.6e-09 67.0 329 27.4
Migut.G00574 Erythranthe guttata HOM05D006910 ORTHO05D008937 4.7e-09 66.6 332 32.5
AL1G14180 Arabidopsis lyrata HOM05D006910 ORTHO05D008937 6.1e-09 66.2 285 26.0
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 8.0e-09 65.9 196 32.7
BolC5t29051H Brassica oleracea HOM05D006910 ORTHO05D008937 1.0e-08 65.5 321 25.5
Aa31LG1G20340 Aethionema arabicum HOM05D006910 ORTHO05D008937 1.4e-08 65.1 212 29.7
MELO3C006372.2 Cucumis melo HOM05D006910 ORTHO05D008937 3.1e-08 63.9 342 30.4
C05p02700 Brassica napus HOM05D006910 ORTHO05D008937 5.2e-08 63.2 321 23.7
Lsat_1_v5_gn_6_66101 Lactuca sativa HOM05D006910 ORTHO05D008937 5.2e-08 63.2 154 33.8
CARHR003870 Cardamine hirsuta HOM05D006910 ORTHO05D008937 6.8e-08 62.8 335 25.4
BolC8t52749H Brassica oleracea HOM05D006910 ORTHO05D008937 1.5e-07 61.6 72 43.1
C08p52150 Brassica napus HOM05D006910 ORTHO05D008937 2.0e-07 61.2 72 44.4
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 2.0e-07 61.2 191 31.4
ECA248G3309 Erigeron canadensis HOM05D006910 ORTHO05D008937 2.6e-07 60.8 177 42.4
HanXRQChr01g0023021 Helianthus annuus HOM05D006910 ORTHO05D008937 5.8e-07 59.7 177 41.8
MSTRG.4175 Avicennia marina HOM05D006910 ORTHO05D008937 1.3e-06 58.5 108 34.3
CDE11G0528 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 1.3e-06 58.5 71 39.4
PSO478G1200 Papaver somniferum HOM05D006910 ORTHO05D009593 1.3e-06 58.5 267 41.2
THA.LOC104826095 Tarenaya hassleriana HOM05D006910 ORTHO05D008937 2.9e-06 57.4 239 31.4
PSO782G3886 Papaver somniferum HOM05D006910 ORTHO05D009593 4.9e-06 56.6 325 38.2
Nitab4.5_0002210g0060 Nicotiana tabacum HOM05D006910 ORTHO05D008937 6.4e-06 56.2 308 26.0
Sed0015418 Sechium edule HOM05D006910 ORTHO05D008937 8.3e-06 55.8 306 30.1


User provided reference genes

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