Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 8.9e-139 496.9 244 100.0
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 3.9e-118 428.3 242 87.6
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 2.5e-117 425.6 244 85.7
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.6e-103 379.8 247 75.7
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 3.0e-102 375.6 248 74.6
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 1.9e-101 372.9 247 74.1
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 1.3e-100 370.2 239 74.9
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 8.1e-100 367.5 242 74.4
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 5.3e-99 364.8 245 73.5
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 2.0e-98 362.8 245 73.1
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 5.8e-98 361.3 239 74.1
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 1.2e-95 353.6 222 74.8
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 6.0e-95 351.3 217 77.0
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 6.0e-95 351.3 245 70.2
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 3.0e-94 349.0 223 74.0
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 5.1e-94 348.2 229 73.4
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 6.7e-94 347.8 245 68.6
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.5e-93 346.7 217 73.3
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.9e-93 346.3 229 73.4
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 3.3e-93 345.5 230 73.0
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 4.3e-93 345.1 244 69.3
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 4.3e-93 345.1 229 72.9
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 5.6e-93 344.7 244 68.0
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 9.6e-93 344.0 218 74.8
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 9.6e-93 344.0 217 72.8
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 9.6e-93 344.0 217 71.9
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 1.6e-92 343.2 248 68.5
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 1.6e-92 343.2 252 68.3
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 2.1e-92 342.8 243 67.5
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 2.1e-92 342.8 244 67.6
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 3.7e-92 342.0 245 68.6
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 1.1e-91 340.5 243 67.9
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 1.4e-91 340.1 243 69.1
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.4e-91 340.1 243 67.9
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 1.4e-91 340.1 244 68.9
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 3.1e-91 339.0 238 68.9
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 5.3e-91 338.2 244 67.6
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.2e-90 337.0 248 66.1
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 2.0e-90 336.3 242 65.7
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 5.8e-90 334.7 230 70.9
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 1.7e-89 333.2 218 72.0
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 1.7e-89 333.2 247 65.6
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 2.2e-89 332.8 248 65.3
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 3.8e-89 332.0 232 68.5
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 4.9e-89 331.6 247 66.0
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 6.5e-89 331.3 217 71.9
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 6.5e-89 331.3 240 65.0
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.1e-88 330.5 216 70.4
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 1.4e-88 330.1 242 64.5
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.4e-88 330.1 216 69.9
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.9e-88 329.7 216 69.9
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 1.9e-88 329.7 223 68.2
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 2.5e-88 329.3 230 67.4
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 2.5e-88 329.3 224 68.8
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 2.5e-88 329.3 222 70.3
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 4.2e-88 328.6 242 66.1
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 5.5e-88 328.2 216 69.9
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 7.1e-88 327.8 242 64.0
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 7.1e-88 327.8 238 66.8
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 9.3e-88 327.4 230 67.8
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 1.2e-87 327.0 230 66.5
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.6e-87 326.6 235 66.0
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 2.1e-87 326.2 217 70.5
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 2.7e-87 325.9 216 70.8
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 7.9e-87 324.3 236 64.0
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 1.8e-86 323.2 240 64.2
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 2.3e-86 322.8 227 65.6
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 3.0e-86 322.4 217 67.3
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 3.0e-86 322.4 226 65.9
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 3.0e-86 322.4 222 69.4
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.9e-86 322.0 255 63.9
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 6.7e-86 321.2 226 65.9
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 1.1e-85 320.5 226 65.9
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 1.5e-85 320.1 232 65.9
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 1.9e-85 319.7 217 67.3
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 2.5e-85 319.3 217 67.3
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 2.5e-85 319.3 217 67.3
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 2.5e-85 319.3 217 67.3
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 3.3e-85 318.9 226 65.0
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 4.3e-85 318.5 226 65.0
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 5.7e-85 318.2 218 66.5
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 5.7e-85 318.2 205 73.2
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 9.7e-85 317.4 265 61.1
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 1.6e-84 316.6 226 65.0
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 1.6e-84 316.6 226 64.2
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 2.8e-84 315.8 249 60.6
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 2.8e-84 315.8 218 67.4
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 4.8e-84 315.1 236 61.9
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 4.8e-84 315.1 217 65.4
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 2.4e-83 312.8 195 72.8
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 3.1e-83 312.4 240 64.6
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 4.5e-82 308.5 217 65.9
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 4.5e-82 308.5 343 49.6
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 5.9e-82 308.1 226 63.3
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 1.3e-81 307.0 225 65.8
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 5.0e-81 305.1 216 68.5
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 5.0e-81 305.1 277 57.4
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 3.1e-75 285.8 199 66.8
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 3.9e-70 268.9 188 70.2
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 6.7e-70 268.1 203 63.5
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 2.6e-69 266.2 165 75.8
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 2.2e-68 263.1 164 75.0
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 1.4e-64 250.4 220 56.4
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 5.5e-64 248.4 218 56.9
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 4.8e-60 235.3 188 66.0
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 4.1e-59 232.3 210 53.8
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 7.7e-58 228.0 217 51.6
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 1.3e-57 227.3 131 82.4
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 2.3e-54 216.5 141 72.3
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 1.8e-43 180.3 101 79.2
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 1.6e-42 177.2 212 46.2
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 1.2e-39 167.5 208 44.2
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 5.6e-32 142.1 142 57.7
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 5.6e-32 142.1 142 57.7
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 1.2e-31 141.0 214 38.8
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 1.6e-31 140.6 96 68.8
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 5.4e-27 125.6 210 37.1
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 6.0e-26 122.1 84 70.2
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 8.6e-25 118.2 115 54.8
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.6e-23 114.0 82 64.6
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.6e-23 114.0 82 64.6
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 2.1e-23 113.6 95 57.9
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.1e-22 111.3 62 77.4
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 5.2e-22 109.0 103 56.3
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.1e-18 97.1 79 60.8
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 2.7e-18 96.7 82 58.5
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 8.6e-17 91.7 216 32.4
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 4.3e-16 89.4 87 52.9
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.1e-15 87.0 55 70.9
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 2.8e-15 86.7 196 32.7
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 3.4e-13 79.7 162 33.3
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 3.2e-11 73.2 48 66.7
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 2.7e-10 70.1 61 60.7


User provided reference genes

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