Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 3.7e-190 668.3 400 100.0
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 2.3e-120 436.4 400 71.5
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 5.4e-117 425.2 401 71.8
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 1.6e-108 397.1 402 69.2
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 2.9e-102 376.3 400 64.8
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 1.2e-100 370.9 397 65.0
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 1.3e-99 367.5 398 66.3
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 8.9e-96 354.8 417 59.0
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 7.3e-90 335.1 418 57.2
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 1.1e-82 311.2 307 58.0
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 1.6e-81 307.4 295 59.0
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 1.5e-79 300.8 404 54.0
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 2.6e-79 300.1 302 55.6
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 1.9e-77 293.9 305 54.1
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 4.2e-77 292.7 302 55.0
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 4.2e-77 292.7 388 58.2
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 3.0e-75 286.6 296 54.7
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 3.9e-75 286.2 310 53.5
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 6.7e-75 285.4 289 56.4
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 1.9e-74 283.9 309 53.7
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 2.1e-73 280.4 300 56.7
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 1.1e-72 278.1 295 53.2
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 4.0e-72 276.2 369 60.4
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 9.0e-72 275.0 301 53.2
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 1.5e-71 274.2 303 53.1
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 3.4e-71 273.1 300 55.3
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 1.9e-69 267.3 284 54.6
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 1.9e-69 267.3 276 58.7
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 2.7e-68 263.5 350 59.7
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 3.5e-68 263.1 289 54.7
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 1.3e-67 261.2 302 52.3
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.3e-67 261.2 297 53.2
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 1.1e-66 258.1 271 56.8
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 1.9e-66 257.3 404 53.0
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 4.3e-66 256.1 463 44.5
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 4.3e-66 256.1 284 55.3
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 7.4e-66 255.4 281 54.8
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 9.6e-66 255.0 363 51.8
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 1.3e-65 254.6 239 59.4
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 2.1e-65 253.8 297 53.5
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 4.8e-65 252.7 285 54.4
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 6.3e-65 252.3 303 51.5
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 1.1e-64 251.5 296 50.7
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 1.4e-64 251.1 283 55.1
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 1.8e-64 250.8 297 51.9
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 4.1e-64 249.6 396 49.7
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 5.3e-64 249.2 390 50.5
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 9.0e-64 248.4 290 51.7
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 1.2e-63 248.1 314 51.3
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 7.6e-63 245.4 303 51.2
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 2.2e-62 243.8 302 49.7
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 8.5e-62 241.9 352 54.3
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 8.5e-62 241.9 277 52.3
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 1.1e-61 241.5 277 52.3
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 1.9e-61 240.7 273 52.7
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 2.5e-61 240.4 278 49.6
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 5.5e-61 239.2 299 47.5
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 7.2e-61 238.8 291 48.8
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 9.3e-61 238.4 305 46.9
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 2.7e-60 236.9 298 50.7
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 3.6e-60 236.5 290 53.4
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 4.6e-60 236.1 385 52.7
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 4.6e-60 236.1 297 50.5
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 4.6e-60 236.1 279 53.8
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.3e-59 233.8 266 56.8
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 3.0e-59 233.4 273 52.4
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 6.7e-59 232.3 292 47.9
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 6.7e-59 232.3 289 48.1
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 6.7e-59 232.3 232 57.8
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 8.7e-59 231.9 275 51.3
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 2.5e-58 230.3 274 52.6
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 3.3e-58 229.9 289 47.8
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 3.3e-58 229.9 276 49.3
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 3.3e-58 229.9 272 49.3
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 2.2e-57 227.3 277 53.4
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 8.2e-57 225.3 305 48.2
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 2.4e-56 223.8 290 47.6
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 4.1e-56 223.0 354 52.5
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 9.0e-56 221.9 272 52.9
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 2.6e-55 220.3 271 51.3
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 2.6e-55 220.3 213 56.3
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 7.7e-55 218.8 276 47.5
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.0e-54 218.4 276 46.7
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 1.7e-54 217.6 292 46.9
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 2.9e-54 216.9 221 53.4
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 5.0e-54 216.1 294 47.3
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 6.5e-54 215.7 289 46.4
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 1.1e-53 214.9 201 58.2
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 7.2e-53 212.2 206 58.7
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 1.2e-52 211.5 226 53.5
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 3.6e-52 209.9 343 43.1
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 5.7e-50 202.6 186 59.1
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.4e-48 198.0 251 50.2
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 3.1e-48 196.8 271 47.6
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 2.0e-47 194.1 273 46.9
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.3e-46 191.4 282 46.1
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 3.8e-46 189.9 265 46.8
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 5.5e-45 186.0 205 48.8
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 7.2e-45 185.7 166 61.4
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 2.1e-44 184.1 214 53.7
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.1e-44 184.1 277 44.4
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 1.5e-42 177.9 354 46.6
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.3e-41 174.9 250 44.8
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.8e-40 171.0 202 52.5
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 2.5e-37 160.6 240 37.9
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 7.2e-37 159.1 225 40.4
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 5.2e-35 152.9 208 41.3
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 3.7e-33 146.7 213 42.7
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 4.1e-32 143.3 271 37.6
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 8.0e-28 129.0 270 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 4.8e-25 119.8 187 39.6
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 1.1e-21 108.6 169 44.4
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.8e-19 101.3 282 31.6
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 1.1e-13 82.0 49 83.7
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 2.6e-10 70.9 78 56.4


User provided reference genes

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