Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 4.9e-72 274.6 166 100.0
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 3.7e-64 248.4 166 78.9
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 3.3e-60 235.3 178 80.3
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 2.4e-58 229.2 169 84.6
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 2.6e-57 225.7 169 70.4
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 4.4e-57 224.9 167 72.5
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 1.7e-56 223.0 167 79.6
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 3.8e-56 221.9 166 68.1
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 7.1e-55 217.6 169 75.1
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 9.3e-55 217.2 167 78.4
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 2.7e-54 215.7 167 70.1
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 2.3e-45 186.0 175 64.0
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 6.6e-45 184.5 185 66.5
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 8.7e-45 184.1 184 57.6
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 1.1e-44 183.7 172 59.3
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 1.5e-44 183.3 131 72.5
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 3.3e-44 182.2 182 61.5
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 5.6e-44 181.4 178 57.9
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 7.3e-44 181.0 183 56.8
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 1.6e-43 179.9 183 62.8
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 2.1e-43 179.5 169 70.4
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 2.1e-43 179.5 179 58.7
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 2.1e-43 179.5 131 70.2
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 2.8e-43 179.1 183 57.4
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 3.6e-43 178.7 176 55.7
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 4.8e-43 178.3 174 57.5
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 4.8e-43 178.3 170 60.6
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 8.1e-43 177.6 167 70.7
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 1.4e-42 176.8 178 60.1
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 1.8e-42 176.4 179 55.9
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 3.1e-42 175.6 166 64.5
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 3.1e-42 175.6 174 59.2
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 6.9e-42 174.5 175 54.3
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 9.0e-42 174.1 127 73.2
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 1.5e-41 173.3 177 56.5
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 2.6e-41 172.6 168 58.9
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 2.6e-41 172.6 174 58.6
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 3.4e-41 172.2 177 57.1
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 4.5e-41 171.8 131 69.5
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 4.5e-41 171.8 174 67.2
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 9.9e-41 170.6 173 62.4
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 9.9e-41 170.6 180 56.1
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 1.3e-40 170.2 170 66.5
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 1.7e-40 169.9 168 67.9
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 3.8e-40 168.7 182 53.8
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 4.9e-40 168.3 175 57.1
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 8.4e-40 167.5 174 66.7
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 1.9e-39 166.4 173 56.1
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 7.1e-39 164.5 129 65.9
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 1.2e-38 163.7 168 64.9
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 1.5e-36 156.8 131 61.8
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 5.6e-36 154.8 181 50.8
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 2.8e-35 152.5 127 66.1
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 4.8e-35 151.8 189 50.8
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 2.4e-34 149.4 132 63.6
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 6.9e-34 147.9 121 66.1
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 3.4e-33 145.6 177 58.8
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 2.9e-32 142.5 136 58.8
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 1.4e-31 140.2 112 68.8
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 1.9e-31 139.8 174 47.7
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 3.2e-31 139.0 194 49.5
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 5.5e-31 138.3 128 57.0
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 9.3e-31 137.5 129 58.9
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 2.1e-30 136.3 129 56.6
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 1.3e-29 133.7 181 54.1
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.3e-29 133.7 175 52.6
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 3.0e-29 132.5 129 55.0
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 6.7e-29 131.3 174 46.0
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 8.7e-29 131.0 130 56.2
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 8.7e-29 131.0 130 56.2
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 1.5e-28 130.2 129 54.3
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 1.5e-28 130.2 129 54.3
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 1.5e-28 130.2 129 54.3
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 1.9e-28 129.8 129 54.3
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 1.9e-28 129.8 129 54.3
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 2.5e-28 129.4 129 54.3
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 5.7e-28 128.3 133 55.6
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 7.4e-28 127.9 182 43.4
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 9.6e-28 127.5 120 61.7
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 1.3e-27 127.1 129 54.3
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 1.3e-27 127.1 129 54.3
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 1.6e-27 126.7 129 53.5
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 3.7e-27 125.6 166 53.6
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 4.8e-27 125.2 181 44.8
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 4.8e-27 125.2 184 45.7
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 1.1e-26 124.0 138 56.5
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.8e-26 123.2 176 51.1
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 4.0e-26 122.1 180 48.3
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 5.3e-26 121.7 131 53.4
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 7.6e-25 117.9 178 44.4
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 1.1e-23 114.0 166 49.4
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 1.4e-23 113.6 108 63.9
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 2.5e-23 112.8 141 50.4
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.2e-23 112.5 177 47.5
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 3.2e-23 112.5 125 49.6
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 4.2e-23 112.1 147 49.0
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 2.8e-19 99.4 140 45.7
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 8.5e-16 87.8 74 70.3
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.4e-15 87.0 127 46.5
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 4.2e-15 85.5 77 66.2
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 5.5e-15 85.1 176 39.2
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 2.1e-14 83.2 146 41.1
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 4.6e-14 82.0 176 35.8
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 6.1e-14 81.6 185 36.2
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 5.1e-13 78.6 80 52.5
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 5.7e-12 75.1 130 40.8
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 2.2e-11 73.2 170 37.6
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 3.8e-08 62.4 132 37.1


User provided reference genes

Program Settings