Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09697_v3 Cicer arietinum L. HOM05D000200 ORTHO05D025043 2.9e-47 192.6 197 100.0
Lalb_Chr21g0306181 Lupinus albus HOM05D000200 ORTHO05D000262 1.0e-28 131.0 78 87.2
TPR.G9045 Trifolium pratense HOM05D000200 ORTHO05D000262 3.1e-25 119.4 78 84.6
arahy.Tifrunner.gnm1.ann1.8K5TVB Arachis hypogaea HOM05D000200 ORTHO05D000262 2.5e-22 109.8 78 78.2
arahy.Tifrunner.gnm1.ann1.Q4RYVU Arachis hypogaea HOM05D000200 ORTHO05D000262 2.5e-22 109.8 78 78.2
Medtr1g070280 Medicago truncatula HOM05D000200 ORTHO05D000262 2.6e-16 89.7 63 82.5
MD05G1201700 Malus domestica HOM05D000200 ORTHO05D000262 4.2e-14 82.4 81 60.5
MD10G1188400 Malus domestica HOM05D000200 ORTHO05D000262 1.6e-13 80.5 81 58.0
Sabra02G0033500 Salix brachista HOM05D000200 ORTHO05D000262 1.0e-12 77.8 82 56.1
Haze_24585 Corylus avellana HOM05D000200 ORTHO05D025043 5.2e-12 75.5 81 53.1
FAN15G1287 Fragaria x ananassa HOM05D000200 ORTHO05D000262 2.6e-11 73.2 87 55.2
RcHm_v2.0_Chr6g0288911 Rosa chinensis HOM05D000200 ORTHO05D000262 2.6e-11 73.2 87 55.2
MSTRG.17482 Avicennia marina HOM05D000200 ORTHO05D000262 4.4e-11 72.4 82 54.9
FvH4_2g22050 Fragaria vesca HOM05D000200 ORTHO05D000262 7.4e-11 71.6 87 55.2
GSVIVG01028290001 Vitis vinifera HOM05D000200 ORTHO05D000262 1.3e-10 70.9 84 54.8
FAN24G0764 Fragaria x ananassa HOM05D000200 ORTHO05D000262 2.2e-10 70.1 87 54.0
FAN20G1012 Fragaria x ananassa HOM05D000200 ORTHO05D000262 2.8e-10 69.7 87 54.0
Duzib138G1862 Durio zibethinus HOM05D000200 ORTHO05D000262 6.3e-10 68.6 80 53.8
Thecc.01G263100 Theobroma cacao HOM05D000200 ORTHO05D000262 6.3e-10 68.6 79 50.6
SGA_v2.0_scaffold98G29337 Striga asiatica HOM05D000200 ORTHO05D000262 2.4e-09 66.6 86 50.0
BolC4t24982H Brassica oleracea HOM05D000200 ORTHO05D000262 5.3e-09 65.5 83 48.2
BraA04t15996Z Brassica rapa HOM05D000200 ORTHO05D000262 1.2e-08 64.3 83 48.2
Solyc06g083960.3 Solanum lycopersicum HOM05D000200 ORTHO05D000262 2.0e-08 63.5 67 50.7
Carub.0005s2501 Capsella rubella HOM05D000200 ORTHO05D000262 3.5e-08 62.8 74 48.6
PGR119G0535 Punica granatum HOM05D000200 ORTHO05D000262 3.5e-08 62.8 61 59.0
vmacro02640 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 4.5e-08 62.4 74 54.1
FAN27G1705 Fragaria x ananassa HOM05D000200 ORTHO05D025043 7.7e-08 61.6 71 54.9
Sopen06g035340 Solanum pennellii HOM05D000200 ORTHO05D000262 7.7e-08 61.6 67 49.3
Prupe.8G228100 Prunus persica HOM05D000200 ORTHO05D000262 1.0e-07 61.2 82 51.2
Cc01_g18570 Coffea canephora HOM05D000200 ORTHO05D000262 1.7e-07 60.5 52 61.5
CsaV3_7G026980 Cucumis sativus L. HOM05D000200 ORTHO05D000262 5.0e-07 58.9 78 47.4
Gohir.A08G189000 Gossypium hirsutum HOM05D000200 ORTHO05D000262 5.0e-07 58.9 72 52.8
Gohir.D08G207400 Gossypium hirsutum HOM05D000200 ORTHO05D000262 5.0e-07 58.9 72 52.8
Gorai.004G219700 Gossypium raimondii HOM05D000200 ORTHO05D000262 5.0e-07 58.9 72 52.8
Oeu028667.2 Olea europaea HOM05D000200 ORTHO05D000262 1.1e-06 57.8 73 43.8
Rhsim13G0032100 Rhododendron simsii HOM05D000200 ORTHO05D000262 1.1e-06 57.8 68 52.9
MELO3C012738.2 Cucumis melo HOM05D000200 ORTHO05D000262 1.5e-06 57.4 78 46.2
ClCG09G008090 Citrullus lanatus HOM05D000200 ORTHO05D000262 2.5e-06 56.6 77 46.8


User provided reference genes

Program Settings