Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 4.0e-93 344.7 174 100.0
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 3.9e-72 275.0 157 87.3
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 1.8e-69 266.2 170 80.0
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 6.9e-69 264.2 170 81.8
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 1.9e-66 256.1 170 77.1
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 4.3e-63 245.0 170 77.6
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 3.7e-62 241.9 178 74.2
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 6.3e-62 241.1 170 75.3
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 5.3e-61 238.0 170 71.8
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 2.0e-60 236.1 170 71.2
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 1.3e-59 233.4 170 73.5
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 1.7e-54 216.5 174 64.9
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 7.7e-52 207.6 173 63.0
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 2.9e-51 205.7 167 62.9
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 1.9e-50 203.0 174 61.5
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 1.9e-50 203.0 173 61.3
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 3.2e-50 202.2 177 60.5
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 3.2e-50 202.2 163 65.0
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 9.4e-50 200.7 168 59.5
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 1.6e-49 199.9 168 59.5
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 2.1e-49 199.5 170 60.6
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 1.4e-48 196.8 174 57.5
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 2.3e-48 196.1 156 63.5
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 2.3e-48 196.1 155 65.2
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 3.0e-48 195.7 173 58.4
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 3.9e-48 195.3 130 73.1
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 3.9e-48 195.3 167 61.7
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 5.2e-48 194.9 172 62.2
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 5.2e-48 194.9 164 62.2
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.5e-47 193.4 156 62.8
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 1.5e-47 193.4 140 67.9
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 2.6e-47 192.6 207 52.7
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 3.3e-47 192.2 155 63.9
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 5.7e-47 191.4 168 59.5
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 9.7e-47 190.7 168 60.1
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 1.3e-46 190.3 188 55.3
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 1.3e-46 190.3 140 63.6
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 1.3e-46 190.3 143 62.9
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 1.3e-46 190.3 168 59.5
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 1.7e-46 189.9 130 70.0
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 1.7e-46 189.9 163 61.3
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 2.8e-46 189.1 143 64.3
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 2.8e-46 189.1 155 65.2
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 3.7e-46 188.7 138 65.9
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 4.8e-46 188.3 169 57.4
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 4.8e-46 188.3 165 58.2
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 6.3e-46 188.0 160 60.0
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 6.3e-46 188.0 157 61.8
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 8.2e-46 187.6 129 69.8
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 1.1e-45 187.2 151 59.6
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.4e-45 186.8 130 70.8
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 1.4e-45 186.8 126 72.2
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 1.8e-45 186.4 149 61.1
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 2.4e-45 186.0 128 71.1
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 2.4e-45 186.0 127 71.7
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 3.1e-45 185.7 135 65.9
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 3.1e-45 185.7 168 56.0
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 5.3e-45 184.9 159 59.1
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 9.1e-45 184.1 157 63.1
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 9.1e-45 184.1 152 58.6
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 1.2e-44 183.7 176 56.8
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 2.0e-44 183.0 151 61.6
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 2.0e-44 183.0 135 65.2
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 2.0e-44 183.0 170 55.3
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 4.5e-44 181.8 160 58.1
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 7.7e-44 181.0 128 67.2
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 1.0e-43 180.6 150 62.0
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 1.7e-43 179.9 176 55.1
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 2.2e-43 179.5 176 55.1
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 2.9e-43 179.1 126 69.0
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 5.0e-43 178.3 136 64.7
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 8.5e-43 177.6 140 62.9
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 1.1e-42 177.2 148 60.8
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 1.5e-42 176.8 126 68.3
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 3.2e-42 175.6 163 57.1
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 3.2e-42 175.6 166 56.0
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 1.6e-41 173.3 164 54.9
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 8.0e-41 171.0 116 70.7
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 4.0e-40 168.7 169 52.7
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 1.2e-39 167.2 128 62.5
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 1.5e-39 166.8 136 61.8
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 2.0e-39 166.4 152 55.3
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 3.3e-39 165.6 163 54.6
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 5.7e-39 164.9 148 54.7
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 1.3e-38 163.7 156 54.5
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 4.1e-37 158.7 122 65.6
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 9.4e-34 147.5 101 67.3
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 6.1e-33 144.8 101 64.4
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 1.4e-32 143.7 101 67.3
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 2.6e-31 139.4 87 75.9
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 9.8e-31 137.5 116 60.3
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 1.3e-30 137.1 122 59.8
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 1.3e-30 137.1 173 47.4
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 1.1e-29 134.0 130 53.1
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 1.4e-29 133.7 157 47.1
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 5.4e-29 131.7 101 60.4
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 2.7e-28 129.4 140 47.1
Nn1g02801 Nelumbo nucifera HOM05D006747 ORTHO05D008384 3.3e-26 122.5 171 47.4
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 1.3e-22 110.5 58 91.4
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 2.8e-22 109.4 120 46.7
Cpa.g.sc165.14 Carica papaya HOM05D006747 ORTHO05D008384 1.4e-16 90.5 80 63.8
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 5.2e-16 88.6 70 65.7
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 2.4e-13 79.7 56 58.9
Nitab4.5_0000326g0130 Nicotiana tabacum HOM05D006747 ORTHO05D008384 2.4e-13 79.7 59 64.4
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 3.2e-13 79.3 73 45.2
Nitab4.5_0005593g0070 Nicotiana tabacum HOM05D006747 ORTHO05D008384 1.2e-12 77.4 121 38.0
Gohir.A07G213740 Gossypium hirsutum HOM05D006747 ORTHO05D008384 1.6e-12 77.0 76 48.7
SEGI_37670 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 2.7e-12 76.3 81 53.1
Actinidia34401 Actinidia chinensis HOM05D006747 ORTHO05D008384 7.8e-12 74.7 54 57.4
Hma1.2p1_0273F.1_g109560 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 2.1e-09 66.6 52 61.5
Actinidia23032 Actinidia chinensis HOM05D004842 ORTHO05D008384 6.4e-06 55.1 31 71.0


User provided reference genes

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