Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09672_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 0.0e+00 1363.6 716 100.0
Psat6g054080 Pisum sativum HOM05D003718 ORTHO05D004402 0.0e+00 1144.0 691 87.3
Medtr1g069780 Medicago truncatula HOM05D003718 ORTHO05D004402 0.0e+00 1143.3 692 87.3
TPR.G5874 Trifolium pratense HOM05D003718 ORTHO05D004402 0.0e+00 1093.6 648 88.1
Lj5g0026512 Lotus japonicus HOM05D003718 ORTHO05D004402 0.0e+00 1089.3 694 82.6
Phvul.007G191800 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 2.3e-304 1048.5 692 81.1
Glyma.10G038000 Glycine max HOM05D003718 ORTHO05D004402 4.5e-300 1034.2 686 79.9
Lalb_Chr02g0152551 Lupinus albus HOM05D003718 ORTHO05D004402 1.1e-298 1029.6 718 76.9
Glyma.03G164400 Glycine max HOM05D003718 ORTHO05D004402 1.4e-296 1022.7 671 80.2
VMungo0720G0687 Vigna mungo HOM05D003718 ORTHO05D004402 4.9e-294 1014.2 692 77.9
Lalb_Chr21g0313961 Lupinus albus HOM05D003718 ORTHO05D004402 8.3e-294 1013.4 693 78.5
Glyma.19G165800 Glycine max HOM05D003718 ORTHO05D004402 5.4e-293 1010.7 692 77.9
Phvul.001G162000 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 1.6e-289 999.2 671 78.2
VMungo1383G2169 Vigna mungo HOM05D003718 ORTHO05D004402 3.5e-284 981.5 696 75.3
arahy.Tifrunner.gnm1.ann1.FU7SP6 Arachis hypogaea HOM05D003718 ORTHO05D004402 1.8e-280 969.1 702 73.6
arahy.Tifrunner.gnm1.ann1.QXN52H Arachis hypogaea HOM05D003718 ORTHO05D004402 1.2e-279 966.5 702 73.5
arahy.Tifrunner.gnm1.ann1.EWE7BX Arachis hypogaea HOM05D003718 ORTHO05D004402 9.8e-279 963.4 738 70.3
arahy.Tifrunner.gnm1.ann1.B1YDGW Arachis hypogaea HOM05D003718 ORTHO05D004402 6.0e-276 954.1 711 71.6
QL09p039591 Quercus lobata HOM05D003718 ORTHO05D004402 1.2e-273 946.4 705 70.6
Cfa013046 Carpinus fangiana HOM05D003718 ORTHO05D004402 6.8e-272 940.6 690 71.6
Dinv34637 Davidia involucrata HOM05D003718 ORTHO05D004402 1.2e-271 939.9 690 70.6
CiPaw.03G266000 Carya illinoinensis HOM05D003718 ORTHO05D004402 4.4e-271 937.9 695 70.2
CiPaw.04G187700 Carya illinoinensis HOM05D003718 ORTHO05D004402 8.3e-270 933.7 688 70.8
MD05G1194900 Malus domestica HOM05D003718 ORTHO05D004402 9.2e-269 930.2 707 69.0
MD10G1181500 Malus domestica HOM05D003718 ORTHO05D004402 3.9e-267 924.9 703 68.7
Prupe.8G221600 Prunus persica HOM05D003718 ORTHO05D004402 8.6e-267 923.7 696 69.3
RcHm_v2.0_Chr6g0287811 Rosa chinensis HOM05D003718 ORTHO05D004402 9.6e-266 920.2 694 70.0
Atru.chr5.1725 Acer truncatum HOM05D003718 ORTHO05D004402 6.2e-265 917.5 690 70.1
FvH4_2g21250 Fragaria vesca HOM05D003718 ORTHO05D004402 1.3e-262 909.8 694 69.2
Potri.005G226100 Populus trichocarpa HOM05D003718 ORTHO05D004402 2.2e-262 909.1 698 68.2
CANSAT01G0671 Cannabis sativa HOM05D003718 ORTHO05D004402 3.8e-262 908.3 690 68.8
Thecc.01G255900 Theobroma cacao HOM05D003718 ORTHO05D004402 1.1e-261 906.7 695 67.3
GSVIVG01028357001 Vitis vinifera HOM05D003718 ORTHO05D004402 1.9e-261 906.0 704 68.5
TWI12G1081 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 1.6e-260 902.9 674 70.5
Hma1.2p1_0273F.1_g109540 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 4.6e-260 901.4 689 68.7
TWI75G1389 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 2.3e-259 899.0 683 69.0
FAN15G3248 Fragaria x ananassa HOM05D003718 ORTHO05D004402 3.9e-259 898.3 717 66.7
Actinidia07305 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.9e-258 896.0 679 68.6
Duzib211G0290 Durio zibethinus HOM05D003718 ORTHO05D004402 1.9e-258 896.0 697 66.4
Duzib133G1085 Durio zibethinus HOM05D003718 ORTHO05D004402 3.3e-258 895.2 690 67.4
FAN24G2691 Fragaria x ananassa HOM05D003718 ORTHO05D004402 3.3e-258 895.2 717 66.9
CSS0040480 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 2.1e-257 892.5 688 68.0
CSS0049010 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 2.1e-257 892.5 681 68.6
Sabra05G0174600 Salix brachista HOM05D003718 ORTHO05D004402 2.1e-257 892.5 721 65.7
CsaV3_1G015830 Cucumis sativus L. HOM05D003718 ORTHO05D004402 3.6e-257 891.7 674 67.8
Gorai.001G179000 Gossypium raimondii HOM05D003718 ORTHO05D004402 2.4e-256 889.0 690 66.7
FAN27G0576 Fragaria x ananassa HOM05D003718 ORTHO05D004402 4.0e-256 888.3 748 64.3
Gohir.D07G156100 Gossypium hirsutum HOM05D003718 ORTHO05D004402 4.0e-256 888.3 690 66.7
Psat3g056400 Pisum sativum HOM05D003718 ORTHO05D004402 1.2e-255 886.7 667 71.5
Sed0001928 Sechium edule HOM05D003718 ORTHO05D004402 5.8e-255 884.4 674 66.9
TPR.G9204 Trifolium pratense HOM05D003718 ORTHO05D004402 5.8e-255 884.4 713 69.0
Manes.12G033700 Manihot esculenta HOM05D003718 ORTHO05D004402 7.6e-255 884.0 700 66.6
MELO3C025537.2 Cucumis melo HOM05D003718 ORTHO05D004402 9.9e-255 883.6 711 65.0
Gohir.A07G149800 Gossypium hirsutum HOM05D003718 ORTHO05D004402 2.2e-254 882.5 690 66.4
TAR633G0796 Trochodendron aralioides HOM05D003718 ORTHO05D004402 2.9e-254 882.1 687 67.5
TAR362G0778 Trochodendron aralioides HOM05D003718 ORTHO05D004402 6.4e-254 880.9 687 67.5
Potri.002G036600 Populus trichocarpa HOM05D003718 ORTHO05D004402 1.1e-253 880.2 688 67.4
Duzib138G1036 Durio zibethinus HOM05D003718 ORTHO05D004402 9.3e-253 877.1 690 66.4
vmacro14814 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 3.0e-251 872.1 652 68.9
Eucgr.K03255 Eucalyptus grandis HOM05D003718 ORTHO05D004402 9.6e-250 867.1 715 65.5
Manes.13G035300 Manihot esculenta HOM05D003718 ORTHO05D004402 1.4e-248 863.2 706 65.9
Ciclev10019124m.g Citrus clementina HOM05D003718 ORTHO05D004402 1.8e-248 862.8 687 66.4
Gohir.D11G137575 Gossypium hirsutum HOM05D003718 ORTHO05D004402 2.6e-247 859.0 695 65.0
Gorai.007G147600 Gossypium raimondii HOM05D003718 ORTHO05D004402 4.5e-247 858.2 695 64.7
Sopen05g027610 Solanum pennellii HOM05D003718 ORTHO05D004402 1.3e-246 856.7 690 66.1
Sabra02G0029600 Salix brachista HOM05D003718 ORTHO05D004402 1.7e-246 856.3 730 63.7
Solyc05g046330.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 1.7e-246 856.3 682 66.1
Ca_08683_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 1.9e-245 852.8 688 69.2
Gohir.A11G131600 Gossypium hirsutum HOM05D003718 ORTHO05D004402 2.4e-245 852.4 695 64.7
PGR031G0689 Punica granatum HOM05D003718 ORTHO05D004402 2.4e-245 852.4 670 66.3
Aqoxy1G01842 Aquilegia oxysepala HOM05D003718 ORTHO05D004402 4.6e-244 848.2 674 64.5
Nn1g02814 Nelumbo nucifera HOM05D003718 ORTHO05D004402 4.6e-244 848.2 684 63.9
CAN.G106.18 Capsicum annuum HOM05D003718 ORTHO05D004402 8.7e-243 844.0 689 65.5
THA.LOC104806254 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 5.6e-242 841.3 692 64.0
Sopen07g005600 Solanum pennellii HOM05D003718 ORTHO05D004402 7.4e-242 840.9 679 65.1
THA.LOC104812416 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 9.6e-242 840.5 696 64.5
Peaxi162Scf00320g00717 Petunia axillaris HOM05D003718 ORTHO05D004402 1.4e-240 836.6 684 64.9
CARHR227730 Cardamine hirsuta HOM05D003718 ORTHO05D004402 2.4e-240 835.9 691 64.0
Migut.D00439 Erythranthe guttata HOM05D003718 ORTHO05D004402 1.2e-239 833.6 688 62.8
MSTRG.21485 Avicennia marina HOM05D003718 ORTHO05D004402 1.7e-238 829.7 698 63.0
Cc01_g18200 Coffea canephora HOM05D003718 ORTHO05D004402 4.9e-238 828.2 691 62.8
Nn3g19693 Nelumbo nucifera HOM05D003718 ORTHO05D004402 6.5e-238 827.8 691 63.5
ClCG03G002590 Citrullus lanatus HOM05D003718 ORTHO05D004402 7.9e-236 820.8 674 63.6
AL7G32970 Arabidopsis lyrata HOM05D003718 ORTHO05D004402 1.3e-235 820.1 691 63.7
Solyc07g014700.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 1.3e-235 820.1 647 66.0
Carub.0007s2028 Capsella rubella HOM05D003718 ORTHO05D004402 8.7e-235 817.4 691 63.4
AUR62013766 Chenopodium quinoa HOM05D003718 ORTHO05D004402 1.1e-234 817.0 675 62.5
DCAR_000921 Daucus carota HOM05D003718 ORTHO05D004402 1.9e-234 816.2 686 62.0
Thhalv10024580m.g Eutrema salsugineum HOM05D003718 ORTHO05D004402 3.3e-234 815.5 692 63.4
ECA236G3831 Erigeron canadensis HOM05D003718 ORTHO05D004402 5.7e-234 814.7 688 63.4
CAN.G54.7 Capsicum annuum HOM05D003718 ORTHO05D004402 7.4e-234 814.3 682 63.0
Rhsim01G0262400 Rhododendron simsii HOM05D003718 ORTHO05D004402 1.4e-232 810.1 613 68.8
Oeu052043.2 Olea europaea HOM05D003718 ORTHO05D004402 1.8e-232 809.7 783 56.6
SalBow4G0483 Salvia bowleyana HOM05D003718 ORTHO05D004402 3.1e-232 808.9 705 59.9
Sp7g19230 Schrenkiella parvula HOM05D003718 ORTHO05D004402 5.3e-232 808.1 695 63.2
AT4G21150 Arabidopsis thaliana HOM05D003718 ORTHO05D004402 2.0e-231 806.2 692 62.9
BcaC09g51252 Brassica carinata HOM05D003718 ORTHO05D004402 6.1e-228 794.7 692 62.1
BolC1t01458H Brassica oleracea HOM05D003718 ORTHO05D004402 1.8e-227 793.1 692 62.0
BraA03t14340Z Brassica rapa HOM05D003718 ORTHO05D004402 4.3e-226 788.5 689 62.7
PSO210G5136 Papaver somniferum HOM05D003718 ORTHO05D004402 4.3e-226 788.5 691 61.4
Lsat_1_v5_gn_8_92540 Lactuca sativa HOM05D003718 ORTHO05D004402 1.6e-225 786.6 686 60.8
BcaNung03839 Brassica carinata HOM05D003718 ORTHO05D004402 2.8e-225 785.8 692 62.1
CDE07G1087 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 3.7e-225 785.4 670 61.8
Nitab4.5_0001572g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 3.7e-225 785.4 680 62.2
HanXRQChr04g0110491 Helianthus annuus HOM05D003718 ORTHO05D004402 6.9e-224 781.2 647 62.3
PSO832G2930 Papaver somniferum HOM05D003718 ORTHO05D004402 9.0e-224 780.8 691 60.9
CDE04G2599 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 1.5e-223 780.0 685 61.0
Nitab4.5_0000413g0180 Nicotiana tabacum HOM05D003718 ORTHO05D004402 4.5e-223 778.5 687 62.2
ATR0736G006 Amborella trichopoda HOM05D003718 ORTHO05D004402 1.9e-221 773.1 647 61.8
Hund17111 Selenicereus undatus HOM05D003718 ORTHO05D004402 5.5e-221 771.5 640 62.2
Os01g0911200 Oryza sativa ssp. japonica HOM05D003718 ORTHO05D004402 1.4e-219 766.9 704 58.1
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 2.5e-218 762.7 650 63.7
EL10Ac1g00739 Beta vulgaris HOM05D003718 ORTHO05D004402 3.7e-217 758.8 710 57.0
SGA_v2.0_scaffold138G35211 Striga asiatica HOM05D003718 ORTHO05D004402 1.4e-216 756.9 818 53.1
BraA01t01195Z Brassica rapa HOM05D003718 ORTHO05D004402 3.1e-216 755.7 652 62.3
A01p12510 Brassica napus HOM05D003718 ORTHO05D004402 5.3e-216 755.0 654 61.8
SGA_v2.0_scaffold1G00624 Striga asiatica HOM05D003718 ORTHO05D004402 2.0e-215 753.1 689 59.7
Aa31LG6G3160 Aethionema arabicum HOM05D003718 ORTHO05D004402 3.4e-215 752.3 658 61.6
C01p15100 Brassica napus HOM05D003718 ORTHO05D004402 5.9e-215 751.5 653 61.4
A03p52670 Brassica napus HOM05D003718 ORTHO05D004402 3.2e-213 745.7 642 62.8
C07p51100 Brassica napus HOM05D003718 ORTHO05D004402 5.5e-213 745.0 642 62.8
BolC7t45610H Brassica oleracea HOM05D003718 ORTHO05D004402 5.5e-213 745.0 642 62.8
Zm00001eb143710 Zea mays HOM05D003718 ORTHO05D004402 5.5e-213 745.0 691 57.2
Zm00001eb365020 Zea mays HOM05D003718 ORTHO05D004402 4.7e-212 741.9 691 57.6
Peaxi162Scf00906g00225 Petunia axillaris HOM05D003718 ORTHO05D004402 6.7e-211 738.0 672 60.0
COL.COLO4_04023 Corchorus olitorius HOM05D003718 ORTHO05D004402 1.5e-210 736.9 607 63.8
Rhsim13G0036100 Rhododendron simsii HOM05D003718 ORTHO05D004402 5.0e-206 721.8 602 64.0
Lsat_1_v5_gn_5_182920 Lactuca sativa HOM05D003718 ORTHO05D004402 9.4e-205 717.6 693 56.6
AUR62023389 Chenopodium quinoa HOM05D003718 ORTHO05D004402 2.0e-202 709.9 675 56.7
Sc02g0003190 Simmondsia chinensis HOM05D003718 ORTHO05D004402 2.6e-202 709.5 616 61.2
HPP92_000351 Vanilla planifolia HOM05D003718 ORTHO05D004402 3.8e-198 695.7 674 55.5
BolC3t20629H Brassica oleracea HOM05D003718 ORTHO05D004402 1.8e-195 686.8 733 54.2
unitig_22.g5287 Utricularia gibba HOM05D003718 ORTHO05D004402 1.6e-191 673.7 732 51.4
C03p83480 Brassica napus HOM05D003718 ORTHO05D004402 1.2e-188 664.1 742 52.7
Nitab4.5_0005411g0050 Nicotiana tabacum HOM05D003718 ORTHO05D004402 4.4e-186 655.6 638 56.7
unitig_8.g3735 Utricularia gibba HOM05D003718 ORTHO05D004402 3.8e-182 642.5 654 53.1
BcaC01g00710 Brassica carinata HOM05D003718 ORTHO05D004402 1.8e-171 607.1 550 60.9
Cpa.g.sc20.44 Carica papaya HOM05D003718 ORTHO05D004402 5.0e-166 589.0 698 50.3
Ah.05g177770 Amaranthus hybridus HOM05D003718 ORTHO05D004402 7.3e-165 585.1 542 57.0
Psat0ss9065g0080 Pisum sativum HOM05D003718 ORTHO05D004402 1.3e-161 574.3 432 74.1
Nitab4.5_0005095g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 7.8e-151 538.5 505 57.6
CsaV3_UNG055470 Cucumis sativus L. HOM05D003718 ORTHO05D004402 5.8e-138 495.7 434 61.1
Actinidia37517 Actinidia chinensis HOM05D003718 ORTHO05D004402 5.1e-134 482.6 585 49.4
Mapoly0028s0115 Marchantia polymorpha HOM05D003718 ORTHO05D004402 1.1e-125 454.9 701 40.9
AUR62043414 Chenopodium quinoa HOM05D003718 ORTHO05D004402 6.9e-123 445.7 352 63.9
SEGI_27157 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 1.4e-104 384.8 361 55.7
vmacro02673 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 1.4e-102 378.3 321 63.6
A08p15230 Brassica napus HOM05D003718 ORTHO05D001664 1.4e-99 368.2 522 44.4
FAN20G1425 Fragaria x ananassa HOM05D003718 ORTHO05D004402 9.1e-99 365.5 330 63.0
EL10Ac1g02094 Beta vulgaris HOM05D003718 ORTHO05D004402 3.0e-94 350.5 307 59.0
HanXRQChr11g0336771 Helianthus annuus HOM05D003718 ORTHO05D004402 2.2e-92 344.4 379 52.2
Haze_21407 Corylus avellana HOM05D003718 ORTHO05D004402 3.7e-92 343.6 308 62.7
Psat7g093680 Pisum sativum HOM05D003718 ORTHO05D004402 6.5e-81 306.2 301 60.5
AagrBONN_evm.TU.Sc2ySwM_340.234 Anthoceros agrestis HOM05D003718 ORTHO05D004402 1.8e-78 298.1 415 45.5
CBR_g32152 Chara braunii HOM05D003718 ORTHO05D004402 7.3e-64 249.6 656 32.2
Hma1.2p1_0576F.1_g181950 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 4.7e-63 246.9 298 49.3
Pp3c7_6480 Physcomitrium patens HOM05D003718 ORTHO05D004402 8.0e-63 246.1 380 43.2
Actinidia09538 Actinidia chinensis HOM05D003718 ORTHO05D004402 5.6e-56 223.4 156 75.0
Actinidia09536 Actinidia chinensis HOM05D003718 ORTHO05D004402 4.9e-52 210.3 263 48.7
FAN27G1677 Fragaria x ananassa HOM05D003718 ORTHO05D004402 7.3e-48 196.4 187 55.1
HPP92_000418 Vanilla planifolia HOM05D003718 ORTHO05D004402 1.3e-44 185.7 637 26.2
SEGI_31370 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 4.1e-43 180.6 249 45.4
arahy.Tifrunner.gnm1.ann1.S1G2KX Arachis hypogaea HOM05D003718 ORTHO05D004402 2.1e-42 178.3 117 74.4
Psat6g086960 Pisum sativum HOM05D003718 ORTHO05D004402 1.0e-33 149.4 96 80.2
SHI09762 Sapria himalayana HOM05D003718 ORTHO05D004402 2.3e-33 148.3 175 50.3
CsaV3_UNG055460 Cucumis sativus L. HOM05D003718 ORTHO05D004402 4.3e-32 144.1 175 48.0
Actinidia09537 Actinidia chinensis HOM05D003718 ORTHO05D004402 3.4e-29 134.4 163 44.8
SMO367G0218 Selaginella moellendorffii HOM05D003718 ORTHO05D004402 5.8e-29 133.7 138 52.9
Actinidia25800 Actinidia chinensis HOM05D003718 ORTHO05D004402 3.5e-26 124.4 198 40.9
arahy.Tifrunner.gnm1.ann1.6B4W14 Arachis hypogaea HOM05D003718 ORTHO05D004402 4.6e-26 124.0 79 78.5
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 1.0e-25 122.9 80 76.2
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea HOM05D003718 ORTHO05D004402 1.0e-25 122.9 80 76.2
Actinidia30158 Actinidia chinensis HOM05D003718 ORTHO05D004402 3.3e-24 117.9 88 60.2
Psat6g087000 Pisum sativum HOM05D003718 ORTHO05D004402 7.6e-21 106.7 68 82.4
Cre08.g368450 Chlamydomonas reinhardtii HOM05D003718 ORTHO05D004402 2.4e-19 101.7 302 33.8
arahy.Tifrunner.gnm1.ann1.LM6F6Z Arachis hypogaea HOM05D003718 ORTHO05D004402 1.2e-18 99.4 114 50.0
Actinidia30157 Actinidia chinensis HOM05D003718 ORTHO05D057597 4.6e-18 97.4 86 60.5
Lsat_1_v5_gn_3_107020 Lactuca sativa HOM05D003718 ORTHO05D004402 1.2e-13 82.8 109 44.0
Lsat_1_v5_gn_4_881 Lactuca sativa HOM05D003718 ORTHO05D004402 7.6e-13 80.1 134 35.1
Actinidia25801 Actinidia chinensis HOM05D003718 ORTHO05D004402 5.5e-11 73.9 118 42.4
Gohir.A01G185580 Gossypium hirsutum HOM05D003718 ORTHO05D000087 1.8e-09 68.9 74 54.1
Lsat_1_v5_gn_9_27880 Lactuca sativa HOM05D003718 ORTHO05D004402 3.1e-06 58.2 181 28.2
arahy.Tifrunner.gnm1.ann1.W3K6WB Arachis hypogaea HOM05D012495 ORTHO05D085229 9.0e-06 56.6 43 65.1


User provided reference genes

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