Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09552_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 3.1e-103 378.6 214 100.0
TPR.G16690 Trifolium pratense HOM05D003079 ORTHO05D003461 1.5e-73 280.0 201 78.1
Psat5g231200 Pisum sativum HOM05D003079 ORTHO05D003461 3.1e-71 272.3 182 82.4
Medtr3g009740 Medicago truncatula HOM05D003079 ORTHO05D003461 5.0e-69 265.0 198 74.7
Ca_06048_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 1.8e-63 246.5 151 96.7
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 4.7e-59 231.9 185 71.4
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 7.0e-55 218.0 116 98.3
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 3.6e-51 205.7 188 69.1
Lalb_Chr15g0079931 Lupinus albus HOM05D003079 ORTHO05D003461 1.0e-50 204.1 189 68.3
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 2.3e-50 203.0 188 69.1
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 1.5e-49 200.3 186 69.4
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 1.3e-48 197.2 187 70.1
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 7.3e-44 181.4 184 63.0
arahy.Tifrunner.gnm1.ann1.WAW8B8 Arachis hypogaea HOM05D003079 ORTHO05D003461 3.0e-42 176.0 184 64.1
Ca_14137_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 3.0e-42 176.0 94 95.7
Lalb_Chr18g0048681 Lupinus albus HOM05D003079 ORTHO05D003461 3.1e-26 122.9 129 62.8
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 2.0e-25 120.2 200 46.5
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 7.5e-25 118.2 207 46.4
Atru.chr2.3897 Acer truncatum HOM05D003079 ORTHO05D003461 9.8e-25 117.9 206 45.1
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 8.3e-24 114.8 207 45.4
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 1.4e-23 114.0 125 56.8
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 3.5e-22 109.4 189 45.5
MD03G1043100 Malus domestica HOM05D003079 ORTHO05D003461 2.3e-21 106.7 204 43.6
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 5.1e-21 105.5 177 43.5
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 5.1e-21 105.5 119 54.6
COL.COLO4_07791 Corchorus olitorius HOM05D003079 ORTHO05D003461 6.6e-21 105.1 119 55.5
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 6.6e-21 105.1 200 44.0
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.1e-20 104.4 201 45.3
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.1e-20 104.4 201 45.3
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.1e-20 104.4 201 45.3
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 1.1e-20 104.4 201 44.8
Dinv40917 Davidia involucrata HOM05D003079 ORTHO05D003461 1.9e-20 103.6 182 45.6
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 1.9e-20 103.6 186 44.6
Dinv19642 Davidia involucrata HOM05D003079 ORTHO05D003461 2.5e-20 103.2 200 44.5
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 2.5e-20 103.2 197 45.2
Haze_09917 Corylus avellana HOM05D003079 ORTHO05D003461 4.3e-20 102.4 188 44.1
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 5.6e-20 102.1 197 41.1
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 7.3e-20 101.7 201 45.3
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 1.2e-19 100.9 179 40.2
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 4.7e-19 99.0 119 52.1
Cpa.g.sc12.64 Carica papaya HOM05D003079 ORTHO05D003461 1.1e-18 97.8 120 52.5
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 1.4e-18 97.4 119 51.3
Sed0005838 Sechium edule HOM05D003079 ORTHO05D003461 1.4e-18 97.4 205 42.4
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 2.3e-18 96.7 127 50.4
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 4.0e-18 95.9 135 49.6
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 5.2e-18 95.5 119 51.3
CSS0022300 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 2.0e-17 93.6 184 42.9
CSS0035812 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 2.0e-17 93.6 184 42.9
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 2.6e-17 93.2 143 45.5
vmacro09798 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 7.6e-17 91.7 180 45.0
Actinidia30350 Actinidia chinensis HOM05D003079 ORTHO05D003461 9.9e-17 91.3 198 43.4
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 9.9e-17 91.3 190 40.5
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 2.2e-16 90.1 138 50.0
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 6.4e-16 88.6 138 49.3
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 6.4e-16 88.6 138 49.3
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 1.1e-15 87.8 126 46.8
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 3.2e-15 86.3 193 39.4
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 4.1e-15 85.9 190 40.5
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 7.1e-15 85.1 193 39.4
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 9.2e-15 84.7 192 40.1
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 1.2e-14 84.3 198 37.9
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 1.6e-14 84.0 184 37.5
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 1.6e-14 84.0 185 38.9
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 2.7e-14 83.2 146 42.5
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 3.5e-14 82.8 128 46.9
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 3.5e-14 82.8 134 45.5
Rhsim04G0008000 Rhododendron simsii HOM05D003079 ORTHO05D003461 4.6e-14 82.4 208 40.9
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 7.8e-14 81.6 199 37.2
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 7.8e-14 81.6 194 38.7
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 1.0e-13 81.3 115 48.7
SalBow8G1693 Salvia bowleyana HOM05D003079 ORTHO05D003461 2.3e-13 80.1 180 42.8
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 3.9e-13 79.3 118 51.7
Lalb_Chr04g0259441 Lupinus albus HOM05D003079 ORTHO05D003461 3.9e-13 79.3 115 53.0
Sp7g24370 Schrenkiella parvula HOM05D003079 ORTHO05D003461 3.9e-13 79.3 189 36.0
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 5.1e-13 79.0 139 47.5
Oeu062673.1 Olea europaea HOM05D003079 ORTHO05D003461 6.6e-13 78.6 128 47.7
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.5e-12 77.4 197 37.1
Carub.0007s1447 Capsella rubella HOM05D003079 ORTHO05D003461 1.9e-12 77.0 191 37.2
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 2.5e-12 76.6 115 50.4
Lj1A901G36 Lonicera japonica HOM05D003079 ORTHO05D003461 2.5e-12 76.6 123 46.3
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 3.3e-12 76.3 163 38.7
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 4.3e-12 75.9 186 39.8
Rhsim06G0235200 Rhododendron simsii HOM05D003079 ORTHO05D003461 4.3e-12 75.9 185 40.5
CARHR234020 Cardamine hirsuta HOM05D003079 ORTHO05D003461 5.6e-12 75.5 184 37.0
Thhalv10024990m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 5.6e-12 75.5 188 37.2
Hund22967 Selenicereus undatus HOM05D003079 ORTHO05D003461 7.3e-12 75.1 121 45.5
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 7.3e-12 75.1 148 43.2
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 9.6e-12 74.7 115 48.7
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 9.6e-12 74.7 120 49.2
AT4G26455 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 1.2e-11 74.3 190 37.4
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 1.2e-11 74.3 163 38.0
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 2.8e-11 73.2 198 36.4
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 3.6e-11 72.8 163 37.4
AL7G26490 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 8.1e-11 71.6 183 37.7
Carub.0008s1653 Capsella rubella HOM05D003079 ORTHO05D003461 8.1e-11 71.6 147 40.8
Aa31LG3G12120 Aethionema arabicum HOM05D003079 ORTHO05D003461 1.1e-10 71.2 187 36.4
PGSC0003DMG400022146 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.4e-10 70.9 191 37.2
Oeu005543.1 Olea europaea HOM05D003079 ORTHO05D003461 1.8e-10 70.5 122 42.6
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 3.1e-10 69.7 128 44.5
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 5.2e-10 68.9 162 40.1
PGR083G0768 Punica granatum HOM05D003079 ORTHO05D003461 6.9e-10 68.6 209 37.3
AL8G31840 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 2.0e-09 67.0 186 38.7
TAR626G0479 Trochodendron aralioides HOM05D003079 ORTHO05D003461 2.6e-09 66.6 186 38.2
Migut.H01709 Erythranthe guttata HOM05D003079 ORTHO05D003461 3.4e-09 66.2 129 41.1
BcaC09g50710 Brassica carinata HOM05D003079 ORTHO05D003461 1.7e-08 63.9 111 42.3
BcaNung02417 Brassica carinata HOM05D003079 ORTHO05D003461 1.7e-08 63.9 190 30.5
BolC1t02168H Brassica oleracea HOM05D003079 ORTHO05D003461 1.7e-08 63.9 111 42.3
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.7e-08 63.9 160 38.1
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 2.2e-08 63.5 173 38.2
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 2.9e-08 63.2 128 42.2
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 3.8e-08 62.8 117 41.0
HanXRQChr11g0335521 Helianthus annuus HOM05D003079 ORTHO05D003461 3.8e-08 62.8 126 39.7
Lsat_1_v5_gn_7_115521 Lactuca sativa HOM05D003079 ORTHO05D003461 8.4e-08 61.6 187 35.3
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 8.4e-08 61.6 196 35.2
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 1.4e-07 60.8 191 37.7
DCAR_017612 Daucus carota HOM05D003079 ORTHO05D003461 1.9e-07 60.5 181 35.4
HPP92_007490 Vanilla planifolia HOM05D003079 ORTHO05D003461 2.4e-07 60.1 187 31.6
AT5G56210 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 5.4e-07 58.9 132 38.6
A01p17700 Brassica napus HOM05D003079 ORTHO05D003461 7.1e-07 58.5 159 34.0
Sp6g18060 Schrenkiella parvula HOM05D003079 ORTHO05D003461 7.1e-07 58.5 186 34.9
ATR0751G003 Amborella trichopoda HOM05D003079 ORTHO05D003461 9.3e-07 58.2 128 39.1
BraA01t01726Z Brassica rapa HOM05D003079 ORTHO05D003461 9.3e-07 58.2 159 34.0
SGA_v2.0_scaffold92G28159 Striga asiatica HOM05D003079 ORTHO05D003461 2.1e-06 57.0 160 34.4
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 3.5e-06 56.2 144 33.3


User provided reference genes

Program Settings