Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 1.1e-150 536.6 270 100.0
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 1.3e-130 469.9 274 88.7
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 1.8e-124 449.5 277 85.2
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 5.6e-118 427.9 281 80.4
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 2.4e-116 422.5 275 80.4
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 6.9e-116 421.0 277 78.7
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 1.6e-112 409.8 280 77.1
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 1.7e-111 406.4 275 76.4
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 8.7e-111 404.1 280 73.9
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 4.0e-108 395.2 274 75.5
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 1.2e-107 393.7 277 74.0
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 5.8e-107 391.3 274 74.1
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 3.8e-106 388.7 277 74.4
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 6.4e-106 387.9 274 73.4
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 1.9e-105 386.3 281 71.9
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 2.4e-105 386.0 274 73.4
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 3.2e-105 385.6 274 73.0
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 9.3e-105 384.0 277 72.6
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 1.2e-104 383.6 275 73.1
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 1.6e-104 383.3 276 71.0
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 1.6e-104 383.3 278 72.7
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 1.6e-104 383.3 275 72.4
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 2.1e-104 382.9 276 71.0
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 3.5e-104 382.1 274 72.3
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 4.6e-104 381.7 276 72.5
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 7.9e-104 380.9 276 70.7
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 7.9e-104 380.9 276 73.2
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 7.9e-104 380.9 282 72.3
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 1.3e-103 380.2 277 70.0
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.3e-103 380.2 278 70.9
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 1.3e-103 380.2 279 70.6
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 1.8e-103 379.8 279 70.3
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.3e-103 379.4 279 72.0
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 6.7e-103 377.9 285 68.8
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.7e-103 377.5 280 70.4
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.9e-102 376.3 277 70.4
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 2.5e-102 375.9 277 71.5
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 2.5e-102 375.9 283 68.6
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 2.5e-102 375.9 275 70.2
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 3.3e-102 375.6 275 71.6
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 3.3e-102 375.6 279 69.2
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 4.3e-102 375.2 276 68.8
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 4.3e-102 375.2 303 67.3
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 4.3e-102 375.2 271 70.1
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 5.6e-102 374.8 270 70.7
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 9.6e-102 374.0 276 71.7
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 9.6e-102 374.0 280 71.4
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 8.1e-101 370.9 278 70.5
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 1.1e-100 370.5 302 65.9
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 1.8e-100 369.8 277 69.7
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 1.8e-100 369.8 277 69.3
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 5.3e-100 368.2 276 72.1
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 9.0e-100 367.5 277 70.8
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 9.0e-100 367.5 272 68.8
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 1.2e-99 367.1 262 74.8
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 2.6e-99 365.9 280 68.6
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 3.4e-99 365.5 275 69.1
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 5.8e-99 364.8 271 69.7
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 5.8e-99 364.8 266 71.8
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.3e-98 363.6 283 67.8
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 4.9e-98 361.7 284 69.0
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 8.4e-98 360.9 225 79.1
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 4.2e-97 358.6 281 67.6
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 4.2e-97 358.6 281 67.6
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 9.3e-97 357.5 200 87.0
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 9.3e-97 357.5 274 69.3
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 2.1e-96 356.3 223 77.6
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 2.1e-96 356.3 223 77.6
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 2.7e-96 355.9 262 70.2
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 3.5e-96 355.5 277 66.8
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.0e-95 354.0 274 68.2
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 1.0e-95 354.0 200 84.5
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 1.8e-95 353.2 282 66.7
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 1.8e-95 353.2 272 68.0
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.3e-95 352.8 253 70.8
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 3.9e-95 352.1 270 68.5
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 3.9e-95 352.1 279 66.7
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.5e-94 350.1 280 66.4
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 1.9e-94 349.7 276 66.7
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 1.9e-94 349.7 274 68.6
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.5e-94 349.4 224 76.8
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 3.3e-94 349.0 279 66.7
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 5.7e-94 348.2 200 82.5
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 7.4e-94 347.8 200 83.0
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 4.8e-93 345.1 272 68.0
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 5.3e-92 341.7 277 67.5
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 6.9e-92 341.3 306 61.8
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 1.5e-91 340.1 273 64.1
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 4.5e-91 338.6 202 81.2
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 3.8e-90 335.5 213 77.9
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 1.4e-89 333.6 201 78.6
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 3.2e-89 332.4 222 72.5
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 3.2e-89 332.4 268 67.2
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 4.6e-88 328.6 274 63.9
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 1.8e-87 326.6 208 76.0
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 3.8e-82 308.9 218 70.2
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 1.4e-81 307.0 221 69.2
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 4.2e-81 305.4 293 58.0
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 2.7e-80 302.8 200 74.0
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 4.6e-80 302.0 178 82.6
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 5.1e-79 298.5 276 60.1
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 1.3e-77 293.9 224 67.0
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 4.5e-75 285.4 282 58.9
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 6.5e-74 281.6 276 59.8
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.7e-69 266.9 241 61.8
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 2.2e-69 266.5 199 65.3
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 4.1e-68 262.3 214 62.6
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 9.1e-68 261.2 161 78.3
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 2.0e-67 260.0 156 78.8
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 5.9e-67 258.5 226 59.7
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 1.0e-66 257.7 156 81.4
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 2.2e-61 240.0 213 59.2
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 1.4e-60 237.3 201 59.7
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 2.7e-56 223.0 253 47.0
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 6.3e-53 211.8 194 53.6
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 4.1e-52 209.1 116 85.3
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 1.2e-46 191.0 111 82.0
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 1.5e-46 190.7 172 62.2
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.2e-40 171.0 183 53.0
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.9e-25 120.6 74 73.0
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.2e-24 117.9 185 40.0
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 2.1e-08 63.9 60 56.7
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 2.4e-07 60.5 34 76.5


User provided reference genes

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