Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09502_v3 Cicer arietinum L. HOM05D009500 ORTHO05D000368 1.5e-158 562.8 284 100.0
TPR.G4783 Trifolium pratense HOM05D009500 ORTHO05D000368 3.4e-89 332.4 292 64.4
Medtr7g116580 Medicago truncatula HOM05D009500 ORTHO05D000368 2.4e-87 326.2 291 61.9
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 2.5e-84 316.2 284 61.3
TPR.G6942 Trifolium pratense HOM05D009500 ORTHO05D000368 3.7e-80 302.4 284 59.5
Medtr7g114090 Medicago truncatula HOM05D009500 ORTHO05D000368 5.1e-77 292.0 283 59.4
TPR.G9274 Trifolium pratense HOM05D009500 ORTHO05D000368 5.6e-76 288.5 286 58.7
TPR.G6938 Trifolium pratense HOM05D009500 ORTHO05D000368 3.1e-74 282.7 284 58.5
TPR.G4800 Trifolium pratense HOM05D009500 ORTHO05D000368 2.0e-73 280.0 293 56.3
TPR.G11377 Trifolium pratense HOM05D009500 ORTHO05D000368 2.6e-65 253.1 260 53.5
TPR.G4702 Trifolium pratense HOM05D009500 ORTHO05D000368 4.9e-64 248.8 291 51.2
TPR.G4714 Trifolium pratense HOM05D009500 ORTHO05D000368 8.4e-64 248.1 224 61.2
Medtr1g111630 Medicago truncatula HOM05D009500 ORTHO05D000368 5.4e-63 245.4 286 50.0
Psat3g004120 Pisum sativum HOM05D009500 ORTHO05D000368 1.6e-59 233.8 219 58.9
TPR.G4771 Trifolium pratense HOM05D009500 ORTHO05D000368 2.4e-55 219.9 253 52.2
Psat3g003680 Pisum sativum HOM05D009500 ORTHO05D000368 4.3e-36 156.0 196 51.5
TPR.G4705 Trifolium pratense HOM05D008175 ORTHO05D000368 1.4e-34 151.0 182 50.5
Ca_25084_v3 Cicer arietinum L. HOM05D009500 ORTHO05D010403 5.9e-33 145.6 130 61.5
TPR.G36952 Trifolium pratense HOM05D009500 ORTHO05D000368 1.9e-31 140.6 101 62.4
Medtr7g117735 Medicago truncatula HOM05D009500 ORTHO05D000368 1.2e-30 137.9 90 67.8
Medtr7g116260 Medicago truncatula HOM05D009500 ORTHO05D000368 2.7e-30 136.7 117 61.5
TPR.G18155 Trifolium pratense HOM05D009500 ORTHO05D000368 1.6e-27 127.5 95 65.3
Ca_09527_v3 Cicer arietinum L. HOM05D009500 ORTHO05D000368 2.2e-27 127.1 105 63.8
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 1.3e-19 101.3 294 30.3
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 7.7e-17 92.0 290 29.7
Potri.017G092301 Populus trichocarpa HOM05D008175 ORTHO05D000368 8.5e-16 88.6 235 30.2
TPR.G6989 Trifolium pratense HOM05D009500 ORTHO05D000368 1.4e-15 87.8 128 48.4
RcHm_v2.0_Chr2g0167641 Rosa chinensis HOM05D000576 ORTHO05D000368 5.5e-15 85.9 242 30.2
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 7.9e-14 82.0 241 30.3
Prupe.3G259800 Prunus persica HOM05D000576 ORTHO05D000368 2.0e-12 77.4 300 28.3
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 2.6e-12 77.0 266 27.8
RcHm_v2.0_Chr2g0167601 Rosa chinensis HOM05D000576 ORTHO05D000368 2.6e-12 77.0 241 29.0
FAN14G3739 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.4e-12 76.3 241 30.3
FAN09G3608 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.7e-12 75.9 310 28.1
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.3e-11 74.7 249 29.7
TPR.G7278 Trifolium pratense HOM05D009500 ORTHO05D000368 3.7e-11 73.2 45 71.1
FAN06G5009 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.1e-10 68.6 285 26.3
Ca_26228_v3 Cicer arietinum L. HOM05D008175 ORTHO05D010403 2.6e-09 67.0 163 33.1
FAN09G4808 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.6e-09 67.0 240 27.1
Medtr7g095560 Medicago truncatula HOM05D008175 ORTHO05D010403 3.5e-09 66.6 312 26.0
FvH4_6g48330 Fragaria vesca HOM05D008847 ORTHO05D000368 5.9e-09 65.9 135 31.1
FAN23G0158 Fragaria x ananassa HOM05D029661 ORTHO05D029371 5.9e-09 65.9 283 26.9
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 5.9e-09 65.9 249 26.9
Psat3g047200 Pisum sativum HOM05D008175 ORTHO05D010403 7.7e-09 65.5 272 27.9
FAN03G0578 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.0e-08 65.1 222 27.9
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.0e-08 65.1 241 28.2
Medtr7g105980 Medicago truncatula HOM05D008175 ORTHO05D010403 1.3e-08 64.7 241 25.3
FvH4_7g27481 Fragaria vesca HOM05D008847 ORTHO05D000368 2.2e-08 63.9 297 25.6
Ciclev10013373m.g Citrus clementina HOM05D000576 ORTHO05D000368 2.9e-08 63.5 242 27.3
RcHm_v2.0_Chr2g0105201 Rosa chinensis HOM05D000576 ORTHO05D000368 2.9e-08 63.5 269 26.4
TAR633G1895 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.9e-08 63.5 302 25.5
FAN05G3417 Fragaria x ananassa HOM05D008847 ORTHO05D000368 6.5e-08 62.4 242 29.3
FAN06G2289 Fragaria x ananassa HOM05D000576 ORTHO05D000368 6.5e-08 62.4 256 28.5
FAN02G4373 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.1e-07 61.6 110 37.3
Medtr7g095350 Medicago truncatula HOM05D008175 ORTHO05D010403 1.1e-07 61.6 236 27.1
Prupe.7G069300 Prunus persica HOM05D000576 ORTHO05D000368 1.1e-07 61.6 259 27.0
RcHm_v2.0_Chr2g0168251 Rosa chinensis HOM05D000576 ORTHO05D000368 1.1e-07 61.6 243 27.2
MELO3C026220.2 Cucumis melo HOM05D000576 ORTHO05D000368 1.9e-07 60.8 246 28.9
FAN10G0882 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.9e-07 60.8 256 28.1
QL10p004689 Quercus lobata HOM05D000576 ORTHO05D000368 1.9e-07 60.8 244 25.4
ClCG06G017710 Citrullus lanatus HOM05D000576 ORTHO05D000368 3.2e-07 60.1 240 27.1
FAN06G0982 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.2e-07 59.7 256 27.7
MD12G1064700 Malus domestica HOM05D000576 ORTHO05D000368 5.5e-07 59.3 250 27.2
CsaV3_1G000750 Cucumis sativus L. HOM05D000576 ORTHO05D000368 1.2e-06 58.2 241 28.2
RcHm_v2.0_Chr5g0008761 Rosa chinensis HOM05D008847 ORTHO05D045484 1.2e-06 58.2 185 26.5
FAN02G1311 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.6e-06 57.8 124 31.5
FAN01G2751 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.1e-06 57.4 256 26.2
Prupe.3G259300 Prunus persica HOM05D008847 ORTHO05D000368 2.1e-06 57.4 259 25.9
Ciclev10008427m.g Citrus clementina HOM05D000576 ORTHO05D000368 2.7e-06 57.0 242 26.4
FvH4_6g48180 Fragaria vesca HOM05D000576 ORTHO05D000368 3.6e-06 56.6 111 29.7
TWI18G0229 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 3.6e-06 56.6 246 26.0
TAR629G0101 Trochodendron aralioides HOM05D000576 ORTHO05D000368 4.7e-06 56.2 279 27.2
CSS0035647 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 6.1e-06 55.8 117 27.4


User provided reference genes

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