Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 2.4e-51 205.3 111 100.0
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 1.2e-45 186.4 118 85.6
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 6.4e-44 180.6 118 84.7
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 4.2e-43 177.9 118 83.1
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 8.7e-41 170.2 112 83.0
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 1.5e-40 169.5 112 82.1
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 5.6e-40 167.5 112 82.1
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 3.4e-37 158.3 111 78.4
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 3.0e-33 145.2 111 73.9
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 3.0e-33 145.2 111 71.2
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 5.1e-33 144.4 115 72.2
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 5.1e-33 144.4 115 72.2
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 5.1e-33 144.4 115 72.2
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 8.7e-33 143.7 111 71.2
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 1.1e-32 143.3 112 71.4
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 1.9e-32 142.5 111 70.3
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 1.9e-32 142.5 111 70.3
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 3.3e-32 141.7 112 69.6
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 5.6e-32 141.0 115 70.4
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 9.6e-32 140.2 112 71.4
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 6.2e-31 137.5 112 68.8
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 8.1e-31 137.1 109 68.8
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 8.1e-31 137.1 112 70.5
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 8.1e-31 137.1 112 70.5
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 1.4e-30 136.3 112 68.8
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 1.8e-30 136.0 116 69.8
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 4.0e-30 134.8 115 65.2
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 5.3e-30 134.4 112 68.8
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 5.3e-30 134.4 109 67.0
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 9.0e-30 133.7 107 72.0
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 1.5e-29 132.9 123 67.5
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 2.0e-29 132.5 110 67.3
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 2.6e-29 132.1 110 70.0
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 3.4e-29 131.7 116 68.1
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 3.4e-29 131.7 116 68.1
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 9.9e-29 130.2 115 66.1
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 1.3e-28 129.8 109 69.7
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 2.9e-28 128.6 111 67.6
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 3.8e-28 128.3 115 64.3
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 4.9e-28 127.9 115 66.1
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 8.4e-28 127.1 110 65.5
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 1.4e-27 126.3 110 67.3
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 1.9e-27 125.9 110 65.5
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 3.2e-27 125.2 111 64.0
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 3.2e-27 125.2 117 63.2
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 3.2e-27 125.2 112 67.9
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 4.2e-27 124.8 117 62.4
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 5.5e-27 124.4 113 64.6
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 5.5e-27 124.4 94 72.3
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 7.1e-27 124.0 112 65.2
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 9.3e-27 123.6 113 66.4
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 9.3e-27 123.6 109 64.2
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 1.6e-26 122.9 111 61.3
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 1.6e-26 122.9 109 61.5
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 1.6e-26 122.9 106 65.1
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 1.6e-26 122.9 110 62.7
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 2.1e-26 122.5 107 65.4
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 2.7e-26 122.1 109 63.3
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 3.5e-26 121.7 106 67.0
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 3.5e-26 121.7 90 77.8
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 3.5e-26 121.7 114 62.3
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 3.5e-26 121.7 116 63.8
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 6.0e-26 120.9 106 64.2
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 7.9e-26 120.6 115 62.6
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 7.9e-26 120.6 115 62.6
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 1.0e-25 120.2 111 61.3
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 1.0e-25 120.2 105 62.9
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 1.0e-25 120.2 105 62.9
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 1.0e-25 120.2 100 67.0
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 1.3e-25 119.8 93 69.9
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 1.3e-25 119.8 92 70.7
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 1.8e-25 119.4 101 67.3
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 2.3e-25 119.0 104 62.5
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 3.0e-25 118.6 104 61.5
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 3.0e-25 118.6 105 64.8
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 6.7e-25 117.5 107 61.7
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 6.7e-25 117.5 93 67.7
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 8.7e-25 117.1 105 65.7
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 1.1e-24 116.7 99 66.7
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 1.1e-24 116.7 109 62.4
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 1.5e-24 116.3 105 64.8
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 1.9e-24 115.9 105 61.9
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 2.5e-24 115.5 113 60.2
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 3.3e-24 115.2 113 63.7
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 4.3e-24 114.8 124 58.1
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 4.3e-24 114.8 109 61.5
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 5.6e-24 114.4 113 63.7
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 1.6e-23 112.8 102 59.8
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 1.6e-23 112.8 118 57.6
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 2.8e-23 112.1 82 76.8
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 2.8e-23 112.1 82 76.8
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 2.8e-23 112.1 89 65.2
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 3.7e-23 111.7 82 74.4
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 4.8e-23 111.3 110 60.9
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 1.8e-22 109.4 69 82.6
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 1.8e-22 109.4 88 64.8
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 6.9e-22 107.5 100 62.0
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.7e-20 102.8 70 77.1
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 3.8e-20 101.7 81 65.4
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 7.1e-19 97.4 153 45.8
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 7.9e-18 94.0 105 55.2
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 2.5e-16 89.0 68 72.1
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 2.5e-16 89.0 68 72.1
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 1.3e-15 86.7 68 72.1
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 8.2e-15 84.0 69 71.0
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 1.4e-14 83.2 76 53.9
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 2.4e-14 82.4 76 55.3
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 4.1e-14 81.6 77 54.5
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 3.4e-13 78.6 115 44.3
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 2.9e-12 75.5 77 49.4
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 5.0e-12 74.7 77 48.1
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 3.2e-11 72.0 75 60.0
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 7.2e-11 70.9 44 79.5
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 7.2e-11 70.9 111 41.4
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 1.2e-10 70.1 44 79.5
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 2.7e-10 68.9 46 71.7
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 3.6e-10 68.6 75 58.7
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 3.6e-10 68.6 79 45.6
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 1.8e-09 66.2 64 48.4
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 7.4e-08 60.8 45 68.9
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 7.4e-08 60.8 82 45.1
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 4.8e-07 58.2 46 60.9
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 3.1e-06 55.5 37 70.3


User provided reference genes

Program Settings