Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 6.9e-169 598.2 592 100.0
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 5.5e-33 146.7 174 47.1
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 1.2e-32 145.6 180 44.4
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 4.3e-30 137.1 179 46.4
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 4.3e-30 137.1 182 42.9
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 2.2e-29 134.8 182 41.8
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 2.2e-29 134.8 182 41.8
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 3.7e-29 134.0 178 43.8
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 5.3e-28 130.2 173 42.8
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 6.9e-28 129.8 146 49.3
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 9.0e-28 129.4 177 42.4
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 1.5e-27 128.6 224 38.4
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 4.5e-27 127.1 173 42.2
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 5.9e-27 126.7 187 42.8
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 5.9e-27 126.7 325 49.5
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.3e-26 125.6 175 41.7
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 1.7e-26 125.2 185 41.6
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 1.7e-26 125.2 179 41.3
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 1.7e-26 125.2 98 55.1
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 1.7e-26 125.2 173 41.6
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 1.7e-26 125.2 156 42.9
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 2.9e-26 124.4 176 42.6
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 5.0e-26 123.6 131 46.6
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 5.0e-26 123.6 131 46.6
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 6.5e-26 123.2 172 43.0
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 2.5e-25 121.3 175 40.0
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 2.5e-25 121.3 124 46.0
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 2.5e-25 121.3 176 38.6
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 4.2e-25 120.6 186 40.9
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 7.2e-25 119.8 177 41.8
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 9.4e-25 119.4 183 39.3
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 1.2e-24 119.0 133 45.9
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 1.6e-24 118.6 133 46.6
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 2.7e-24 117.9 180 41.1
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 3.6e-24 117.5 103 49.5
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 4.6e-24 117.1 180 40.0
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 4.6e-24 117.1 180 40.0
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 7.9e-24 116.3 182 40.1
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 7.9e-24 116.3 99 51.5
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 8.8e-23 112.8 177 37.9
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 4.3e-22 110.5 134 38.8
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 7.4e-22 109.8 175 39.4
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 1.3e-21 109.0 183 37.2
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 1.3e-21 109.0 146 40.4
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 1.7e-21 108.6 128 39.8
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 8.2e-21 106.3 167 40.1
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 8.2e-21 106.3 149 40.9
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 1.1e-20 105.9 113 44.2
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 1.4e-20 105.5 317 47.3
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 9.1e-20 102.8 176 39.8
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 2.0e-19 101.7 179 37.4
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 4.5e-19 100.5 179 39.7
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 5.9e-19 100.1 77 55.8
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 1.0e-18 99.4 145 44.1
Glyma.03G251200 Glycine max HOM05D007620 ORTHO05D009568 6.5e-18 96.7 118 66.1
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 8.5e-18 96.3 99 47.5
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 2.5e-17 94.7 76 53.9
Glyma.19G248500 Glycine max HOM05D007620 ORTHO05D009568 4.2e-17 94.0 117 44.4
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 7.2e-17 93.2 125 36.8
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 4.7e-16 90.5 175 34.3
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 4.7e-16 90.5 175 34.3
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 6.1e-16 90.1 177 33.9
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 1.0e-15 89.4 175 34.3
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.9e-15 87.4 175 33.7
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 3.9e-15 87.4 164 36.6
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 3.9e-15 87.4 174 34.5
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 6.7e-15 86.7 224 31.2
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 8.8e-15 86.3 176 34.7
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 1.1e-14 85.9 171 32.7
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 1.1e-14 85.9 172 33.7
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 1.5e-14 85.5 100 41.0
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 3.3e-14 84.3 181 32.6
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 4.4e-14 84.0 180 34.4
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 9.7e-14 82.8 189 36.0
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 9.7e-14 82.8 178 34.3
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 6.3e-13 80.1 185 34.6
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 8.2e-13 79.7 195 32.3
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 1.1e-12 79.3 176 33.0
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 2.4e-12 78.2 144 36.1
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 4.1e-12 77.4 176 33.5
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 7.0e-12 76.6 187 31.0
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 3.5e-11 74.3 186 30.1
PGR004G1481 Punica granatum HOM05D007620 ORTHO05D009568 7.7e-11 73.2 103 44.7
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 1.0e-10 72.8 191 31.4
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 8.5e-10 69.7 97 37.1
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 5.5e-09 67.0 179 27.9
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 1.2e-08 65.9 160 29.4
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 1.6e-08 65.5 139 29.5
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 2.1e-08 65.1 180 29.4
Sopen04g005200 Solanum pennellii HOM05D007620 ORTHO05D009568 2.7e-08 64.7 45 55.6
Thhalv10022408m.g Eutrema salsugineum HOM05D007620 ORTHO05D009568 3.6e-08 64.3 44 56.8
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 8.0e-08 63.2 145 31.0
Lj2C43T6 Lonicera japonica HOM05D017878 ORTHO05D018225 8.0e-08 63.2 57 42.1
Nitab4.5_0006737g0010 Nicotiana tabacum HOM05D007620 ORTHO05D009568 8.0e-08 63.2 43 58.1
FAN18G1084 Fragaria x ananassa HOM05D002453 ORTHO05D008746 1.4e-07 62.4 110 30.0
FAN18G1604 Fragaria x ananassa HOM05D002453 ORTHO05D008746 1.4e-07 62.4 110 30.0
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 2.3e-07 61.6 76 38.2
Nitab4.5_0003780g0130 Nicotiana tabacum HOM05D007620 ORTHO05D009568 3.0e-07 61.2 43 58.1
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 4.0e-07 60.8 145 29.7
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 5.2e-07 60.5 142 31.7
Haze_09312 Corylus avellana HOM05D002453 ORTHO05D008746 6.7e-07 60.1 69 36.2
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 2.0e-06 58.5 90 34.4
COL.COLO4_15482 Corchorus olitorius HOM05D007620 ORTHO05D009568 3.3e-06 57.8 52 51.9
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 3.3e-06 57.8 105 31.4
RcHm_v2.0_Chr7g0184831 Rosa chinensis HOM05D002453 ORTHO05D008746 9.7e-06 56.2 62 40.3


User provided reference genes

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