Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 6.6e-168 594.0 303 100.0
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 4.8e-150 534.6 298 89.9
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 3.1e-149 531.9 300 89.0
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 1.9e-146 522.7 300 88.7
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 8.2e-134 480.7 303 80.5
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 1.0e-131 473.8 296 79.7
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 1.3e-131 473.4 296 81.1
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 3.2e-130 468.8 298 78.9
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 4.2e-130 468.4 301 78.4
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 1.8e-112 409.8 299 68.6
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 1.4e-109 400.2 299 67.2
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 2.4e-109 399.4 293 66.6
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 4.1e-109 398.7 296 66.2
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 9.1e-109 397.5 298 66.1
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 1.6e-108 396.7 296 68.9
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 2.7e-108 396.0 297 65.3
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 4.5e-108 395.2 303 65.7
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 8.5e-107 391.0 298 66.4
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 1.1e-106 390.6 305 64.3
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 5.5e-106 388.3 300 64.7
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 2.7e-105 386.0 298 64.8
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 2.7e-105 386.0 298 64.8
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 1.8e-104 383.3 322 63.4
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 6.8e-104 381.3 303 62.7
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 8.8e-104 380.9 303 62.4
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 2.6e-103 379.4 300 63.3
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 9.8e-103 377.5 298 63.4
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 4.8e-102 375.2 299 62.5
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 8.3e-102 374.4 300 62.3
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 7.0e-101 371.3 302 61.9
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 7.0e-101 371.3 300 62.7
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 2.7e-100 369.4 301 61.1
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 5.0e-99 365.2 302 59.3
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 1.5e-98 363.6 302 58.9
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 2.5e-98 362.8 302 58.6
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 7.2e-98 361.3 300 59.0
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 1.2e-97 360.5 298 58.4
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 2.1e-97 359.8 302 58.9
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 2.8e-97 359.4 298 58.1
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 3.6e-97 359.0 303 60.4
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 8.0e-97 357.8 302 57.0
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 1.4e-96 357.1 301 60.1
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 1.4e-96 357.1 302 60.3
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 1.8e-96 356.7 302 59.3
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 3.0e-96 355.9 302 57.0
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 3.0e-96 355.9 300 57.7
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 4.0e-96 355.5 297 57.6
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 4.0e-96 355.5 298 57.4
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 5.2e-96 355.1 302 57.0
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 6.8e-96 354.8 302 57.3
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 6.8e-96 354.8 302 58.6
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 8.8e-96 354.4 302 56.3
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 7.5e-95 351.3 302 56.3
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 9.8e-95 350.9 302 57.3
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 9.8e-95 350.9 300 58.3
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 3.7e-94 349.0 302 57.3
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 5.4e-93 345.1 302 57.3
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 4.5e-92 342.0 300 55.7
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 4.5e-92 342.0 304 57.6
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 1.0e-91 340.9 302 56.6
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 5.0e-91 338.6 302 55.6
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 1.5e-90 337.0 302 57.0
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 3.3e-90 335.9 302 55.6
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 3.3e-90 335.9 302 55.3
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 5.6e-90 335.1 298 55.7
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 1.4e-88 330.5 298 55.0
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 2.3e-88 329.7 301 54.2
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 4.0e-88 328.9 301 55.8
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 4.0e-88 328.9 300 55.0
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 6.8e-88 328.2 306 54.9
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 1.2e-87 327.4 301 54.2
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 1.5e-87 327.0 301 54.2
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 1.7e-86 323.6 298 55.4
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.1e-85 320.9 300 56.0
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.8e-85 320.1 300 56.0
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 2.7e-84 316.2 295 54.6
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 1.3e-83 313.9 299 53.2
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 3.0e-83 312.8 331 50.5
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 1.2e-81 307.4 301 49.8
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 8.0e-81 304.7 271 55.7
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 3.1e-80 302.8 296 55.1
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 9.2e-77 291.2 302 52.0
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 1.2e-76 290.8 298 51.0
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 5.6e-74 282.0 313 48.6
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 6.2e-73 278.5 299 48.5
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 3.2e-69 266.2 300 48.3
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 9.2e-69 264.6 216 62.0
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 3.1e-64 249.6 218 62.4
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 1.4e-61 240.7 279 45.2
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 1.0e-59 234.6 216 58.3
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 1.3e-59 234.2 205 60.0
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 4.7e-57 225.7 298 45.0
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 3.4e-55 219.5 204 54.9
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 1.9e-53 213.8 308 36.4
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 4.6e-52 209.1 299 38.1
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 1.3e-51 207.6 297 39.1
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 6.2e-49 198.7 200 47.0
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 5.3e-48 195.7 311 33.8
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 7.6e-47 191.8 162 61.1
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 1.9e-42 177.2 179 50.3
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 5.8e-31 139.0 198 40.9
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 6.7e-27 125.6 80 70.0
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 2.4e-24 117.1 103 60.2
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.6e-20 104.4 121 47.1
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 2.5e-18 97.1 225 31.1
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 7.4e-18 95.5 64 57.8
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 3.1e-16 90.1 64 57.8
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 9.1e-16 88.6 56 60.7
MELO3C029443.2 Cucumis melo HOM05D006834 ORTHO05D008623 6.5e-06 55.8 34 67.6


User provided reference genes

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