Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 2.1e-70 268.9 131 100.0
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 5.4e-58 227.6 121 90.9
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 7.8e-57 223.8 121 88.4
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 1.7e-56 222.6 121 87.6
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 2.5e-55 218.8 121 88.4
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 3.3e-55 218.4 120 86.7
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 6.8e-53 210.7 121 84.3
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 1.2e-52 209.9 121 84.3
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 5.8e-52 207.6 121 81.8
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 4.9e-51 204.5 119 80.7
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 8.4e-51 203.8 116 83.6
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 1.9e-50 202.6 119 79.8
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 1.9e-50 202.6 119 80.7
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 1.2e-49 199.9 117 80.3
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 3.5e-49 198.4 117 79.5
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 1.0e-48 196.8 127 73.2
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 1.0e-48 196.8 129 72.1
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 2.3e-48 195.7 119 76.5
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 5.1e-48 194.5 118 75.4
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 8.6e-48 193.7 120 75.0
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 1.1e-47 193.4 119 75.6
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 1.1e-47 193.4 121 75.2
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.9e-47 192.6 119 76.5
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 2.5e-47 192.2 117 74.4
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 3.3e-47 191.8 122 73.0
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 4.3e-47 191.4 119 77.3
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 4.3e-47 191.4 118 75.4
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 1.2e-46 189.9 122 75.4
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.6e-46 189.5 119 75.6
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 1.6e-46 189.5 119 75.6
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.6e-46 188.3 122 73.8
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 6.2e-46 187.6 119 73.9
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 6.2e-46 187.6 122 74.6
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 8.1e-46 187.2 115 72.2
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 1.4e-45 186.4 108 82.4
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 1.8e-45 186.0 117 76.9
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 4.0e-45 184.9 119 72.3
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 6.8e-45 184.1 119 70.6
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 8.9e-45 183.7 119 73.1
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 8.9e-45 183.7 122 69.7
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 1.2e-44 183.3 119 73.9
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 1.2e-44 183.3 119 73.1
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 1.5e-44 183.0 119 73.1
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 2.0e-44 182.6 119 72.3
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 2.0e-44 182.6 119 72.3
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 5.8e-44 181.0 119 70.6
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 9.9e-44 180.3 117 69.2
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 1.3e-43 179.9 115 70.4
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 1.3e-43 179.9 117 67.5
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 2.9e-43 178.7 115 70.4
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 3.8e-43 178.3 115 69.6
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 4.9e-43 177.9 117 67.5
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 4.9e-43 177.9 117 68.4
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 4.9e-43 177.9 117 68.4
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 4.9e-43 177.9 117 68.4
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 4.9e-43 177.9 117 68.4
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 8.4e-43 177.2 108 77.8
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 1.1e-42 176.8 115 68.7
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 1.1e-42 176.8 117 70.1
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 1.9e-42 176.0 115 67.8
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 3.2e-42 175.3 131 62.6
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 5.4e-42 174.5 119 66.4
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 7.1e-42 174.1 120 65.8
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 9.3e-42 173.7 140 61.4
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 1.2e-41 173.3 117 66.7
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 1.2e-41 173.3 119 70.6
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.6e-41 172.9 149 61.1
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 2.7e-41 172.2 122 70.5
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 6.0e-41 171.0 123 65.9
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 7.8e-41 170.6 117 69.2
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 3.0e-40 168.7 128 63.3
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 5.1e-40 167.9 117 63.2
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 5.1e-40 167.9 117 65.0
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 1.9e-39 166.0 100 77.0
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 7.3e-39 164.1 108 72.2
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 6.2e-38 161.0 101 71.3
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 1.1e-37 160.2 123 65.9
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 4.0e-37 158.3 97 76.3
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 2.2e-35 152.5 116 62.1
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 9.3e-34 147.1 119 60.5
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 4.6e-33 144.8 114 63.2
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 3.9e-32 141.7 119 60.5
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 3.1e-29 132.1 117 54.7
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 9.9e-28 127.1 77 76.6
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.3e-27 126.7 80 76.2
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.2e-27 125.9 80 75.0
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 6.7e-24 114.4 83 68.7
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 4.3e-23 111.7 109 51.4
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 3.7e-22 108.6 110 48.2
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 1.0e-19 100.5 79 64.6
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 8.4e-19 97.4 59 76.3
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 2.1e-17 92.8 107 46.7
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 3.7e-14 82.0 86 51.2
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 1.2e-12 77.0 101 42.6
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 7.9e-09 64.3 92 43.5
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.8e-08 63.2 40 67.5


User provided reference genes

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