Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09209_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 1.5e-259 899.0 469 100.0
Psat3g020160 Pisum sativum HOM05D000361 ORTHO05D004243 2.4e-188 662.5 529 68.1
TPR.G4118 Trifolium pratense HOM05D000361 ORTHO05D004243 3.0e-175 619.0 542 63.5
Phvul.001G212700 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 1.5e-158 563.5 524 60.7
Lj1g0012423 Lotus japonicus HOM05D000361 ORTHO05D004243 6.2e-157 558.1 406 73.2
Glyma.02G012800 Glycine max HOM05D000361 ORTHO05D004243 2.5e-153 546.2 527 59.6
Glyma.10G013400 Glycine max HOM05D000361 ORTHO05D004243 4.2e-153 545.4 530 59.2
arahy.Tifrunner.gnm1.ann1.66RZQ8 Arachis hypogaea HOM05D000361 ORTHO05D004243 1.0e-151 540.8 528 58.3
Medtr1g087100 Medicago truncatula HOM05D000361 ORTHO05D004243 1.0e-151 540.8 530 59.4
Phvul.007G214400 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 1.0e-151 540.8 527 59.0
arahy.Tifrunner.gnm1.ann1.KULZ0F Arachis hypogaea HOM05D000361 ORTHO05D004243 1.3e-151 540.4 528 58.1
Ca_10285_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 3.0e-151 539.3 532 58.8
Lj5g0013347 Lotus japonicus HOM05D000361 ORTHO05D004243 5.1e-151 538.5 531 59.7
arahy.Tifrunner.gnm1.ann1.N0EKR1 Arachis hypogaea HOM05D000361 ORTHO05D004243 1.1e-150 537.3 534 58.4
TPR.G19758 Trifolium pratense HOM05D000361 ORTHO05D004243 3.3e-150 535.8 530 59.2
Psat6g161800 Pisum sativum HOM05D000361 ORTHO05D004243 1.3e-149 533.9 531 58.9
VMungo0720G0598 Vigna mungo HOM05D000361 ORTHO05D004243 1.1e-148 530.8 527 58.4
arahy.Tifrunner.gnm1.ann1.G7NAMC Arachis hypogaea HOM05D000361 ORTHO05D004243 2.1e-144 516.5 555 55.9
Lalb_Chr06g0166851 Lupinus albus HOM05D000361 ORTHO05D004243 2.1e-144 516.5 526 56.5
VMungo1383G3239 Vigna mungo HOM05D000361 ORTHO05D004243 1.4e-143 513.8 517 57.4
Haze_05039 Corylus avellana HOM05D000361 ORTHO05D004243 7.9e-136 488.0 547 53.4
CiPaw.07G117400 Carya illinoinensis HOM05D000361 ORTHO05D004243 8.8e-135 484.6 545 53.0
QL12p019966 Quercus lobata HOM05D000361 ORTHO05D004243 8.8e-135 484.6 550 52.9
MD03G1295300 Malus domestica HOM05D000361 ORTHO05D004243 1.2e-131 474.2 538 51.1
Thecc.01G313200 Theobroma cacao HOM05D000361 ORTHO05D004243 1.5e-131 473.8 544 52.8
Cfa005802 Carpinus fangiana HOM05D000361 ORTHO05D005006 1.7e-130 470.3 543 52.3
Duzib138G1700 Durio zibethinus HOM05D000361 ORTHO05D004243 6.5e-130 468.4 544 52.2
GSVIVG01028119001 Vitis vinifera HOM05D000361 ORTHO05D004243 3.2e-129 466.1 545 50.8
Hma1.2p1_0486F.1_g163260 Hydrangea macrophylla HOM05D000361 ORTHO05D004243 7.2e-129 464.9 555 49.9
Prupe.5G007800 Prunus persica HOM05D000361 ORTHO05D004243 2.1e-128 463.4 539 50.6
Ciclev10010795m.g Citrus clementina HOM05D000361 ORTHO05D004243 3.6e-128 462.6 544 51.5
Lalb_Chr15g0078161 Lupinus albus HOM05D000361 ORTHO05D004243 3.6e-128 462.6 370 66.5
Actinidia20995 Actinidia chinensis HOM05D000361 ORTHO05D004243 1.4e-127 460.7 549 50.6
RcHm_v2.0_Chr7g0241471 Rosa chinensis HOM05D000361 ORTHO05D004243 3.9e-127 459.1 543 49.9
CSS0010179 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 3.3e-126 456.1 541 50.3
FvH4_5g39210 Fragaria vesca HOM05D000361 ORTHO05D004243 3.7e-125 452.6 542 50.2
AUR62011807 Chenopodium quinoa HOM05D000361 ORTHO05D004243 1.8e-124 450.3 544 50.4
Ciclev10018936m.g Citrus clementina HOM05D000361 ORTHO05D004243 1.8e-124 450.3 544 50.4
Cc01_g21390 Coffea canephora HOM05D000361 ORTHO05D004243 2.4e-124 449.9 546 49.3
Gohir.A11G109900 Gossypium hirsutum HOM05D000361 ORTHO05D004243 3.1e-124 449.5 544 50.6
Gorai.007G122900 Gossypium raimondii HOM05D000361 ORTHO05D004243 3.1e-124 449.5 544 50.9
Actinidia25847 Actinidia chinensis HOM05D000361 ORTHO05D004243 4.1e-124 449.1 549 49.4
Dinv10097 Davidia involucrata HOM05D000361 ORTHO05D004243 1.2e-123 447.6 557 49.2
CSS0030911 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 2.6e-123 446.4 546 49.8
Gohir.D12G128800 Gossypium hirsutum HOM05D000361 ORTHO05D004243 2.6e-123 446.4 546 50.9
CSS0012467 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 1.0e-122 444.5 544 49.3
AUR62024653 Chenopodium quinoa HOM05D000361 ORTHO05D004243 1.0e-122 444.5 544 49.8
CANSAT25G2078 Cannabis sativa HOM05D000361 ORTHO05D004243 1.7e-122 443.7 544 49.8
Gohir.A12G125100 Gossypium hirsutum HOM05D000361 ORTHO05D004243 2.2e-122 443.4 546 50.7
Gorai.008G139800 Gossypium raimondii HOM05D000361 ORTHO05D004243 2.2e-122 443.4 546 50.7
Manes.01G227700 Manihot esculenta HOM05D000361 ORTHO05D004243 3.8e-122 442.6 537 50.1
Solyc06g009650.3 Solanum lycopersicum HOM05D000361 ORTHO05D004243 6.5e-122 441.8 539 48.8
vmacro15111 Vaccinium macrocarpon HOM05D000361 ORTHO05D004243 8.5e-122 441.4 544 50.2
Nitab4.5_0006144g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 1.1e-121 441.0 544 47.2
Sopen06g004290 Solanum pennellii HOM05D000361 ORTHO05D004243 1.9e-121 440.3 539 48.8
Ah.10g031040 Amaranthus hybridus HOM05D000361 ORTHO05D004243 4.2e-121 439.1 543 48.3
MELO3C023707.2 Cucumis melo HOM05D000361 ORTHO05D004243 5.5e-121 438.7 543 48.1
CsaV3_7G025080 Cucumis sativus L. HOM05D000361 ORTHO05D004243 9.4e-121 438.0 547 47.5
Rhsim01G0290600 Rhododendron simsii HOM05D000361 ORTHO05D004243 1.2e-120 437.6 549 49.2
Sopen01g031260 Solanum pennellii HOM05D000361 ORTHO05D004243 1.2e-120 437.6 539 47.9
Sc05g0000420 Simmondsia chinensis HOM05D000361 ORTHO05D004243 6.1e-120 435.3 542 47.8
Eucgr.H00929 Eucalyptus grandis HOM05D000361 ORTHO05D004243 1.4e-119 434.1 544 47.8
Solyc01g079490.2 Solanum lycopersicum HOM05D000361 ORTHO05D004243 2.3e-119 433.3 539 47.5
CAN.G1280.26 Capsicum annuum HOM05D000361 ORTHO05D004243 4.0e-119 432.6 538 47.6
TWI36G0074 Tripterygium wilfordii HOM05D000361 ORTHO05D004243 5.2e-119 432.2 547 48.8
EL10As5g23529 Beta vulgaris HOM05D000361 ORTHO05D004243 6.8e-119 431.8 520 49.4
COL.COLO4_23233 Corchorus olitorius HOM05D000361 ORTHO05D004243 1.2e-118 431.0 512 51.2
PGR119G2139 Punica granatum HOM05D000361 ORTHO05D004243 1.5e-118 430.6 540 48.1
Sed0012026 Sechium edule HOM05D000361 ORTHO05D004243 5.7e-118 428.7 546 47.6
Nn4g25601 Nelumbo nucifera HOM05D000361 ORTHO05D004243 3.7e-117 426.0 541 47.1
Nitab4.5_0000363g0270 Nicotiana tabacum HOM05D000361 ORTHO05D004243 3.7e-117 426.0 570 45.3
Aqoxy3G02976 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 8.3e-117 424.9 552 47.3
FAN18G4464 Fragaria x ananassa HOM05D000361 ORTHO05D004243 4.1e-116 422.5 520 49.0
Hund09630 Selenicereus undatus HOM05D000361 ORTHO05D004243 5.3e-116 422.2 511 48.5
Potri.002G196300 Populus trichocarpa HOM05D000361 ORTHO05D004243 7.0e-116 421.8 544 47.4
Peaxi162Scf00058g02630 Petunia axillaris HOM05D000361 ORTHO05D004243 2.0e-115 420.2 575 44.7
Potri.014G120900 Populus trichocarpa HOM05D000361 ORTHO05D004243 2.7e-115 419.9 544 48.5
TAR633G1939 Trochodendron aralioides HOM05D000361 ORTHO05D004243 7.7e-115 418.3 521 48.6
AL6G51220 Arabidopsis lyrata HOM05D000361 ORTHO05D004243 1.7e-114 417.2 546 47.1
CARHR249640 Cardamine hirsuta HOM05D000361 ORTHO05D004243 3.8e-114 416.0 546 46.2
Manes.05G003200 Manihot esculenta HOM05D000361 ORTHO05D004243 6.5e-114 415.2 418 55.5
Peaxi162Scf00691g00222 Petunia axillaris HOM05D000361 ORTHO05D004243 2.5e-113 413.3 518 47.1
THA.LOC104801306 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 2.5e-113 413.3 546 46.7
Dinv33114 Davidia involucrata HOM05D000361 ORTHO05D004243 3.2e-113 412.9 546 46.9
Duzib133G0716 Durio zibethinus HOM05D000361 ORTHO05D004243 3.2e-113 412.9 527 48.8
MSTRG.21685 Avicennia marina HOM05D000361 ORTHO05D004243 5.5e-113 412.1 544 46.0
THA.LOC104799236 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 5.5e-113 412.1 543 47.3
AT4G02030 Arabidopsis thaliana HOM05D000361 ORTHO05D004243 7.2e-113 411.8 546 46.9
FAN08G2818 Fragaria x ananassa HOM05D000361 ORTHO05D004243 2.1e-112 410.2 543 47.7
ECA236G0422 Erigeron canadensis HOM05D000361 ORTHO05D005006 4.7e-112 409.1 540 45.2
ClCG07G000710 Citrullus lanatus HOM05D000361 ORTHO05D004243 1.4e-111 407.5 509 47.9
FAN04G1824 Fragaria x ananassa HOM05D000361 ORTHO05D004243 3.0e-111 406.4 535 47.3
Carub.0006s3520 Capsella rubella HOM05D000361 ORTHO05D004243 3.4e-110 402.9 546 45.6
Sp6g01910 Schrenkiella parvula HOM05D000361 ORTHO05D004243 3.4e-110 402.9 546 45.8
Aqoxy3G01218 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 5.7e-110 402.1 551 46.6
Thhalv10028443m.g Eutrema salsugineum HOM05D000361 ORTHO05D004243 3.7e-109 399.4 546 45.6
BcaC04g24028 Brassica carinata HOM05D000361 ORTHO05D004243 4.8e-109 399.1 546 45.8
BcaB01g02087 Brassica carinata HOM05D000361 ORTHO05D004243 1.4e-108 397.5 546 45.1
C09p01600 Brassica napus HOM05D000361 ORTHO05D004243 1.4e-108 397.5 547 46.1
PSO017G2448 Papaver somniferum HOM05D000361 ORTHO05D004243 3.1e-108 396.4 542 44.6
A09p01480 Brassica napus HOM05D000361 ORTHO05D004243 4.1e-108 396.0 547 45.9
PSO063G6259 Papaver somniferum HOM05D000361 ORTHO05D004243 1.2e-107 394.4 541 44.4
SGA_v2.0_scaffold36G14324 Striga asiatica HOM05D000361 ORTHO05D004243 1.3e-106 391.0 570 44.0
Migut.N00925 Erythranthe guttata HOM05D000361 ORTHO05D004243 2.9e-106 389.8 559 44.5
ATR0796G177 Amborella trichopoda HOM05D000361 ORTHO05D004243 3.3e-105 386.3 545 43.9
Aa31LG5G1680 Aethionema arabicum HOM05D000361 ORTHO05D004243 1.3e-101 374.4 561 44.0
Lsat_1_v5_gn_1_35460 Lactuca sativa HOM05D000361 ORTHO05D004243 4.9e-101 372.5 555 43.1
DCAR_012354 Daucus carota HOM05D000361 ORTHO05D004243 1.4e-100 370.9 552 43.5
HanXRQChr15g0464131 Helianthus annuus HOM05D000361 ORTHO05D004243 4.1e-100 369.4 541 42.9
HPP92_004593 Vanilla planifolia HOM05D000361 ORTHO05D004243 8.6e-98 361.7 537 41.3
SalBow2G3626 Salvia bowleyana HOM05D000361 ORTHO05D004243 3.3e-97 359.8 518 44.6
Oeu008471.2 Olea europaea HOM05D000361 ORTHO05D004243 9.5e-97 358.2 410 50.5
CDE11G0331 Ceratophyllum demersum HOM05D000361 ORTHO05D004243 1.4e-95 354.4 552 41.5
BolC9t53093H Brassica oleracea HOM05D000361 ORTHO05D004243 8.9e-95 351.7 569 42.4
BraA09t35809Z Brassica rapa HOM05D000361 ORTHO05D004243 5.8e-94 349.0 565 42.7
Sabra14G0089600 Salix brachista HOM05D000361 ORTHO05D005006 3.7e-93 346.3 642 39.4
Lj2A1205T44 Lonicera japonica HOM05D000361 ORTHO05D004243 1.4e-92 344.4 479 48.0
Nitab4.5_0001301g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 1.7e-90 337.4 527 41.0
Sabra02G0160700 Salix brachista HOM05D000361 ORTHO05D004243 5.0e-90 335.9 719 35.3
Aqoxy328s001 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 2.6e-86 323.6 418 48.8
Os03g0737800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D004243 2.2e-85 320.5 408 45.6
DCAR_005759 Daucus carota HOM05D000361 ORTHO05D004243 5.1e-82 309.3 428 43.7
Cpa.g.sc18.42 Carica papaya HOM05D000361 ORTHO05D004243 1.3e-69 268.1 306 51.3
Zm00001eb215280 Zea mays HOM05D000361 ORTHO05D004243 2.4e-68 263.8 440 39.3
CAN.G777.12 Capsicum annuum HOM05D000361 ORTHO05D004243 4.8e-64 249.6 371 43.1
Nitab4.5_0011075g0020 Nicotiana tabacum HOM05D000361 ORTHO05D004243 1.4e-63 248.1 375 41.3
ClCG10G006350 Citrullus lanatus HOM05D000361 ORTHO05D004243 1.5e-62 244.6 323 44.6
Atru.chr5.1003 Acer truncatum HOM05D000361 ORTHO05D004243 9.3e-60 235.3 220 58.2
SMO195G0031 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 5.3e-55 219.5 536 33.0
SMO116G0335 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 1.3e-53 214.9 544 32.9
unitig_736.g22937 Utricularia gibba HOM05D000361 ORTHO05D004243 4.2e-52 209.9 378 38.9
SEGI_20894 Sequoiadendron giganteum HOM05D000361 ORTHO05D004243 2.0e-46 191.0 371 36.1
Oeu049914.1 Olea europaea HOM05D000361 ORTHO05D004243 1.7e-45 188.0 535 31.6
Pp3c12_23510 Physcomitrium patens HOM05D000361 ORTHO05D004243 1.4e-44 184.9 556 28.6
arahy.Tifrunner.gnm1.ann1.Z1FAFN Arachis hypogaea HOM05D000361 ORTHO05D004243 1.6e-43 181.4 255 46.3
arahy.Tifrunner.gnm1.ann1.3FW809 Arachis hypogaea HOM05D000361 ORTHO05D004243 6.0e-43 179.5 253 45.8
AagrBONN_evm.TU.Sc2ySwM_228.3730 Anthoceros agrestis HOM05D000361 ORTHO05D004243 1.1e-41 175.3 395 30.6
Mapoly0167s0022 Marchantia polymorpha HOM05D000361 ORTHO05D004243 5.3e-39 166.4 569 26.5
CAN.G777.11 Capsicum annuum HOM05D000361 ORTHO05D004243 1.1e-36 158.7 173 51.4
Pp3c3_36800 Physcomitrium patens HOM05D000361 ORTHO05D004243 1.1e-36 158.7 430 29.3
arahy.Tifrunner.gnm1.ann1.1JN5P4 Arachis hypogaea HOM05D000361 ORTHO05D004243 2.7e-35 154.1 110 70.9
Atru.chr5.1002 Acer truncatum HOM05D000361 ORTHO05D004243 9.7e-33 145.6 188 49.5
CBR_g48220 Chara braunii HOM05D000361 ORTHO05D004243 1.4e-26 125.2 305 30.5
arahy.Tifrunner.gnm1.ann1.99VT9P Arachis hypogaea HOM05D000361 ORTHO05D004243 3.0e-26 124.0 246 37.4
Gohir.D11G114600 Gossypium hirsutum HOM05D000361 ORTHO05D004243 3.0e-26 124.0 124 54.0
Oeu049910.1 Olea europaea HOM05D000361 ORTHO05D004243 2.2e-24 117.9 96 63.5
Glyma.14G155300 Glycine max HOM05D000361 ORTHO05D004243 2.8e-24 117.5 108 57.4
arahy.Tifrunner.gnm1.ann1.3YE891 Arachis hypogaea HOM05D000361 ORTHO05D004243 3.1e-23 114.0 70 80.0
Actinidia04687 Actinidia chinensis HOM05D000361 ORTHO05D004243 9.4e-20 102.4 173 38.2
Actinidia27762 Actinidia chinensis HOM05D000361 ORTHO05D004243 9.4e-20 102.4 173 38.2
Actinidia04728 Actinidia chinensis HOM05D000361 ORTHO05D004243 1.4e-15 88.6 117 41.9
Medtr7g109490 Medicago truncatula HOM05D000361 ORTHO05D004243 2.6e-14 84.3 56 75.0
SHI15042 Sapria himalayana HOM05D000361 ORTHO05D004243 1.3e-13 82.0 339 23.0
Lalb_Chr15g0078151 Lupinus albus HOM05D000361 ORTHO05D004243 6.5e-13 79.7 57 73.7
arahy.Tifrunner.gnm1.ann1.F7DSY0 Arachis hypogaea HOM05D000361 ORTHO05D004243 8.0e-11 72.8 90 47.8
Zm00001eb056500 Zea mays HOM05D000361 ORTHO05D004243 8.0e-11 72.8 80 50.0
Hma1.2p1_0568F.1_g180240 Hydrangea macrophylla HOM05D000361 ORTHO05D004243 3.0e-10 70.9 60 58.3
MCO10G287 Micromonas commoda HOM05D000361 ORTHO05D004243 1.5e-09 68.6 468 21.8
PRCOL_00004542 Prasinoderma coloniale HOM05D000361 ORTHO05D004243 5.7e-09 66.6 287 21.6
arahy.Tifrunner.gnm1.ann1.WB4NLC Arachis hypogaea HOM05D001795 ORTHO05D001741 7.0e-07 59.7 36 80.6
ClCG10G006380 Citrullus lanatus HOM05D000361 ORTHO05D004243 9.1e-07 59.3 56 55.4
arahy.Tifrunner.gnm1.ann1.DXQ6L2 Arachis hypogaea HOM05D001795 ORTHO05D001741 1.6e-06 58.5 36 77.8
Migut.H00631 Erythranthe guttata HOM05D000361 ORTHO05D004243 2.0e-06 58.2 68 51.5
Hma1.2p1_0023F.1_g015020 Hydrangea macrophylla HOM05D002686 ORTHO05D004243 2.0e-06 58.2 70 42.9
arahy.Tifrunner.gnm1.ann1.FUJ1Q4 Arachis hypogaea HOM05D001795 ORTHO05D006205 4.5e-06 57.0 35 77.1
Aqoxy7G02110 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 7.7e-06 56.2 47 59.6


User provided reference genes

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