Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09205_v3 Cicer arietinum L. HOM05D001935 ORTHO05D010109 9.1e-87 323.6 164 100.0
Medtr7g109420 Medicago truncatula HOM05D001935 ORTHO05D010109 1.1e-44 183.7 163 65.0
Psat3g020520 Pisum sativum HOM05D001935 ORTHO05D010109 5.6e-44 181.4 162 64.2
TPR.G4060 Trifolium pratense HOM05D001935 ORTHO05D010109 2.3e-42 176.0 176 59.1
Lj1g0023097 Lotus japonicus HOM05D001935 ORTHO05D010109 3.3e-36 155.6 165 55.8
Glyma.03G218900 Glycine max HOM05D001935 ORTHO05D010109 7.3e-36 154.5 179 53.6
Glyma.19G215700 Glycine max HOM05D001935 ORTHO05D010109 4.4e-33 145.2 168 54.8
Phvul.001G212300 Phaseolus vulgaris HOM05D001935 ORTHO05D010109 3.7e-32 142.1 168 54.2
VMungo1383G2590 Vigna mungo HOM05D001935 ORTHO05D010109 2.1e-30 136.3 171 52.6
Cpa.g.sc18.27 Carica papaya HOM05D001935 ORTHO05D010109 3.1e-26 122.5 148 45.9
TAR633G2657 Trochodendron aralioides HOM05D001935 ORTHO05D010109 7.5e-25 117.9 144 46.5
TAR362G0690 Trochodendron aralioides HOM05D001136 ORTHO05D010109 2.9e-24 115.9 144 43.1
TWI36G1013 Tripterygium wilfordii HOM05D001935 ORTHO05D010109 2.4e-23 112.8 170 41.8
Haze_05029 Corylus avellana HOM05D001935 ORTHO05D010109 1.6e-22 110.2 146 44.5
COL.COLO4_23245 Corchorus olitorius HOM05D001935 ORTHO05D010109 2.7e-22 109.4 173 38.7
Thecc.01G311900 Theobroma cacao HOM05D001935 ORTHO05D010109 3.5e-22 109.0 161 41.6
Gohir.D07G132400 Gossypium hirsutum HOM05D001935 ORTHO05D010109 4.6e-22 108.6 133 45.1
Gorai.001G143800 Gossypium raimondii HOM05D001935 ORTHO05D010109 4.6e-22 108.6 133 45.1
Cfa005813 Carpinus fangiana HOM05D001935 ORTHO05D010109 7.8e-22 107.8 147 42.9
QL12p020164 Quercus lobata HOM05D001935 ORTHO05D010109 7.8e-22 107.8 146 41.8
Actinidia21004 Actinidia chinensis HOM05D001136 ORTHO05D001144 1.0e-21 107.5 153 41.8
Gohir.A07G128000 Gossypium hirsutum HOM05D001935 ORTHO05D010109 1.0e-21 107.5 133 45.1
CiPaw.07G116400 Carya illinoinensis HOM05D001935 ORTHO05D010109 1.9e-20 103.2 149 40.3
Duzib138G0891 Durio zibethinus HOM05D001935 ORTHO05D010109 2.5e-20 102.8 163 37.4
Manes.01G226900 Manihot esculenta HOM05D001935 ORTHO05D010109 5.6e-20 101.7 143 38.5
Aqoxy2G01830 Aquilegia oxysepala HOM05D001935 ORTHO05D010109 1.8e-18 96.7 146 38.4
CiPaw.08G090700 Carya illinoinensis HOM05D001935 ORTHO05D010109 2.4e-18 96.3 133 41.4
Gohir.D12G129300 Gossypium hirsutum HOM05D001935 ORTHO05D010109 2.4e-18 96.3 165 35.8
Gorai.008G140400 Gossypium raimondii HOM05D001935 ORTHO05D010109 2.4e-18 96.3 165 35.8
Potri.016G128800 Populus trichocarpa HOM05D001935 ORTHO05D010109 3.1e-18 95.9 184 39.1
Hma1.2p1_0486F.1_g163095 Hydrangea macrophylla HOM05D001935 ORTHO05D010109 5.2e-18 95.1 149 38.3
Hma1.2p1_0486F.1_g163120 Hydrangea macrophylla HOM05D001935 ORTHO05D010109 5.2e-18 95.1 149 38.3
MELO3C015930.2 Cucumis melo HOM05D001935 ORTHO05D010109 6.8e-18 94.7 142 41.5
Atru.chr5.1024 Acer truncatum HOM05D001935 ORTHO05D010109 8.9e-18 94.4 155 39.4
Gohir.A12G125800 Gossypium hirsutum HOM05D001935 ORTHO05D010109 8.9e-18 94.4 165 35.2
Atru.chr5.1021 Acer truncatum HOM05D001935 ORTHO05D010109 2.6e-17 92.8 155 34.8
MBI19_g24818_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 3.4e-17 92.4 115 44.3
Potri.006G105500 Populus trichocarpa HOM05D001935 ORTHO05D010109 5.8e-17 91.7 150 38.7
Potri.006G105600 Populus trichocarpa HOM05D001935 ORTHO05D010109 5.8e-17 91.7 150 38.7
Dinv10085 Davidia involucrata HOM05D001935 ORTHO05D010109 7.6e-17 91.3 102 43.1
Sabra16G0129700 Salix brachista HOM05D001935 ORTHO05D010109 9.9e-17 90.9 179 39.1
Sed0028026 Sechium edule HOM05D001935 ORTHO05D010109 1.3e-16 90.5 158 36.7
CSS0010042 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D010109 1.7e-16 90.1 99 46.5
CSS0012652 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D010109 1.7e-16 90.1 99 46.5
Sabra06G0082000 Salix brachista HOM05D001935 ORTHO05D010109 1.7e-16 90.1 147 41.5
EL10As5g23516 Beta vulgaris HOM05D001935 ORTHO05D010109 2.9e-16 89.4 179 39.7
MBI18_g28444_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 2.9e-16 89.4 101 47.5
Oeu038015.2 Olea europaea HOM05D001935 ORTHO05D010109 2.9e-16 89.4 136 34.6
CSS0036092 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D010109 8.4e-16 87.8 148 37.8
Ah.02g112210 Amaranthus hybridus HOM05D001935 ORTHO05D010109 1.4e-15 87.0 148 37.2
Dinv10084 Davidia involucrata HOM05D001935 ORTHO05D010109 1.4e-15 87.0 102 41.2
Rhsim13G0005200 Rhododendron simsii HOM05D001935 ORTHO05D010109 1.9e-15 86.7 157 35.7
Eucgr.H01053 Eucalyptus grandis HOM05D001935 ORTHO05D010109 5.4e-15 85.1 158 34.8
Gorai.007G123300 Gossypium raimondii HOM05D001935 ORTHO05D010109 5.4e-15 85.1 132 35.6
Sed0011579 Sechium edule HOM05D001935 ORTHO05D010109 5.4e-15 85.1 137 40.1
Gohir.D11G115100 Gossypium hirsutum HOM05D001935 ORTHO05D010109 7.1e-15 84.7 133 35.3
ClCG09G005160 Citrullus lanatus HOM05D001935 ORTHO05D010109 9.2e-15 84.3 141 38.3
Rhsim13G0005300 Rhododendron simsii HOM05D001935 ORTHO05D010109 9.2e-15 84.3 143 37.1
EL10As5g23517 Beta vulgaris HOM05D001935 ORTHO05D010109 1.2e-14 84.0 143 39.2
AUR62024666 Chenopodium quinoa HOM05D001935 ORTHO05D010109 1.2e-14 84.0 148 38.5
PGR044G2318 Punica granatum HOM05D001935 ORTHO05D010109 1.6e-14 83.6 173 32.4
SalBow3G1122 Salvia bowleyana HOM05D001935 ORTHO05D010109 2.7e-14 82.8 147 38.1
GSVIVG01028106001 Vitis vinifera HOM05D001935 ORTHO05D010109 2.7e-14 82.8 131 38.9
AUR62011822 Chenopodium quinoa HOM05D001935 ORTHO05D010109 3.5e-14 82.4 144 40.3
Gohir.A11G109500 Gossypium hirsutum HOM05D001935 ORTHO05D010109 4.6e-14 82.0 164 32.3
CsaV3_7G029910 Cucumis sativus L. HOM05D001935 ORTHO05D010109 1.7e-13 80.1 75 56.0
ATR0706G209 Amborella trichopoda HOM05D001935 ORTHO05D010109 2.3e-13 79.7 147 35.4
DCAR_005768 Daucus carota HOM05D001935 ORTHO05D010109 3.3e-12 75.9 111 38.7
Ciclev10022487m.g Citrus clementina HOM05D001935 ORTHO05D010109 7.3e-12 74.7 112 38.4
Ah.11g049310 Amaranthus hybridus HOM05D001935 ORTHO05D010109 9.6e-12 74.3 176 34.1
Dinv12075 Davidia involucrata HOM05D001935 ORTHO05D010109 2.4e-10 69.7 65 46.2
Rhsim04G0219100 Rhododendron simsii HOM05D003369 ORTHO05D004089 3.1e-10 69.3 76 42.1
SGA_v2.0_scaffold376G50276 Striga asiatica HOM05D001935 ORTHO05D010109 3.1e-10 69.3 134 37.3
EL10Ac5g10513 Beta vulgaris HOM05D001935 ORTHO05D010109 6.9e-10 68.2 86 43.0
HanXRQChr07g0189891 Helianthus annuus HOM05D001935 ORTHO05D001700 1.2e-09 67.4 163 26.4
AUR62024667 Chenopodium quinoa HOM05D001935 ORTHO05D010109 7.6e-09 64.7 139 36.7
Rhsim03G0153200 Rhododendron simsii HOM05D003369 ORTHO05D004089 9.9e-09 64.3 76 40.8
Os01g0304400 Oryza sativa ssp. japonica HOM05D001935 ORTHO05D010109 2.2e-08 63.2 127 31.5
Sabra08G0096000 Salix brachista HOM05D001935 ORTHO05D001700 8.4e-08 61.2 150 31.3
HanXRQChr17g0567051 Helianthus annuus HOM05D001935 ORTHO05D001700 1.1e-07 60.8 158 26.6
unitig_0.g277 Utricularia gibba HOM05D001935 ORTHO05D010109 1.1e-07 60.8 142 33.1
Sed0010378 Sechium edule HOM05D001935 ORTHO05D001700 2.4e-07 59.7 61 47.5
Atru.chr1.1571 Acer truncatum HOM05D001935 ORTHO05D001700 3.2e-07 59.3 108 30.6
CSS0049402 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D001700 3.2e-07 59.3 142 28.9
MELO3C022841.2 Cucumis melo HOM05D001935 ORTHO05D001700 4.2e-07 58.9 138 30.4
Zm00001eb156470 Zea mays HOM05D001935 ORTHO05D001700 5.4e-07 58.5 134 31.3
Zm00001eb440490 Zea mays HOM05D001935 ORTHO05D001700 5.4e-07 58.5 134 31.3
Rhsim09G0068600 Rhododendron simsii HOM05D001935 ORTHO05D001700 7.1e-07 58.2 140 30.0
Migut.H00255 Erythranthe guttata HOM05D001935 ORTHO05D001700 9.3e-07 57.8 155 29.0
Glyma.07G180600 Glycine max HOM05D001935 ORTHO05D001700 9.3e-07 57.8 134 29.9
HanXRQChr08g0212901 Helianthus annuus HOM05D001935 ORTHO05D001700 9.3e-07 57.8 162 26.5
SGA_v2.0_scaffold14G06923 Striga asiatica HOM05D001935 ORTHO05D001700 9.3e-07 57.8 137 29.9
MSTRG.2193 Avicennia marina HOM05D001935 ORTHO05D001700 1.2e-06 57.4 102 32.4
AUR62011823 Chenopodium quinoa HOM05D001935 ORTHO05D010109 1.2e-06 57.4 117 34.2
ATR0326G068 Amborella trichopoda HOM05D001935 ORTHO05D001700 1.6e-06 57.0 92 35.9
CsaV3_5G023980 Cucumis sativus L. HOM05D001935 ORTHO05D001700 1.6e-06 57.0 179 28.5
ECA238G1875 Erigeron canadensis HOM05D001935 ORTHO05D001700 1.6e-06 57.0 144 28.5
MBI10_g37756_MAGBIO Magnolia biondii HOM05D001935 ORTHO05D001700 1.6e-06 57.0 157 28.7
Peaxi162Scf00119g00143 Petunia axillaris HOM05D001935 ORTHO05D001700 1.6e-06 57.0 161 26.7
Sed0021808 Sechium edule HOM05D001935 ORTHO05D001700 1.6e-06 57.0 148 30.4
AUR62023214 Chenopodium quinoa HOM05D001935 ORTHO05D001700 2.1e-06 56.6 154 31.2
Glyma.05G001500 Glycine max HOM05D001935 ORTHO05D001700 2.1e-06 56.6 133 31.6
Nitab4.5_0001648g0030 Nicotiana tabacum HOM05D001935 ORTHO05D001700 2.1e-06 56.6 96 35.4
Solyc04g007580.1 Solanum lycopersicum HOM05D001935 ORTHO05D001700 2.1e-06 56.6 173 25.4
Zm00001eb340260 Zea mays HOM05D001935 ORTHO05D010109 2.1e-06 56.6 155 31.0
ClCG03G008750 Citrullus lanatus HOM05D001935 ORTHO05D001700 2.7e-06 56.2 178 27.5
SalBow3G1818 Salvia bowleyana HOM05D001935 ORTHO05D001700 2.7e-06 56.2 149 28.9
SalBow3G2705 Salvia bowleyana HOM05D001935 ORTHO05D001700 2.7e-06 56.2 149 28.9
Sed0022544 Sechium edule HOM05D001935 ORTHO05D001700 2.7e-06 56.2 171 27.5
EL10Ac2g04515 Beta vulgaris HOM05D001935 ORTHO05D001700 3.5e-06 55.8 149 27.5
AUR62023260 Chenopodium quinoa HOM05D001935 ORTHO05D001700 3.5e-06 55.8 153 29.4
SEGI_14616 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 3.5e-06 55.8 157 29.3
BraA05t23128Z Brassica rapa HOM05D001935 ORTHO05D001700 4.6e-06 55.5 92 37.0
Lsat_1_v5_gn_2_80780 Lactuca sativa HOM05D001935 ORTHO05D001700 4.6e-06 55.5 145 29.0
Sc14g0007210 Simmondsia chinensis HOM05D001935 ORTHO05D001700 4.6e-06 55.5 104 31.7
A05p43910 Brassica napus HOM05D001935 ORTHO05D001700 7.8e-06 54.7 92 37.0
FvH4_1g29020 Fragaria vesca HOM05D001935 ORTHO05D001700 7.8e-06 54.7 91 34.1
FAN19G1971 Fragaria x ananassa HOM05D001935 ORTHO05D001700 7.8e-06 54.7 91 34.1
MBI10_g41075_MAGBIO Magnolia biondii HOM05D001935 ORTHO05D001700 7.8e-06 54.7 96 32.3
Manes.02G072700 Manihot esculenta HOM05D001935 ORTHO05D001700 7.8e-06 54.7 149 30.9
Nitab4.5_0000414g0010 Nicotiana tabacum HOM05D001935 ORTHO05D001700 7.8e-06 54.7 96 34.4
PSO478G0831 Papaver somniferum HOM05D001935 ORTHO05D001700 7.8e-06 54.7 81 39.5


User provided reference genes

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