Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09200_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 1.3e-120 436.4 218 100.0
Psat5g096000 Pisum sativum HOM05D007468 ORTHO05D009051 5.3e-66 255.0 223 63.7
Psat3g020640 Pisum sativum HOM05D007468 ORTHO05D009051 6.9e-58 228.0 223 59.2
Medtr7g109300 Medicago truncatula HOM05D007468 ORTHO05D009051 3.7e-51 205.7 271 48.3
TPR.G20290 Trifolium pratense HOM05D007468 ORTHO05D009051 6.5e-48 194.9 233 53.6
Phvul.001G211600 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 1.8e-45 186.8 207 57.0
Glyma.19G214800 Glycine max HOM05D007468 ORTHO05D009051 1.2e-41 174.1 194 56.7
Lalb_Chr15g0078361 Lupinus albus HOM05D007468 ORTHO05D009051 2.3e-37 159.8 250 46.4
Glyma.03G218100 Glycine max HOM05D007468 ORTHO05D009051 2.8e-35 152.9 224 47.8
Phvul.007G216300 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 4.5e-33 145.6 198 49.0
Lj1g0017695 Lotus japonicus HOM05D007468 ORTHO05D009051 1.4e-31 140.6 175 52.0
Glyma.10G015100 Glycine max HOM05D007468 ORTHO05D009051 3.2e-31 139.4 216 44.0
Glyma.02G014400 Glycine max HOM05D007468 ORTHO05D009051 7.9e-30 134.8 233 44.6
Lalb_Chr21g0309461 Lupinus albus HOM05D007468 ORTHO05D009051 2.3e-29 133.3 239 42.7
Lalb_Chr08g0237891 Lupinus albus HOM05D007468 ORTHO05D009051 6.7e-29 131.7 251 40.2
Psat6g163440 Pisum sativum HOM05D007468 ORTHO05D009051 9.7e-28 127.9 217 41.0
VMungo1383G0307 Vigna mungo HOM05D007468 ORTHO05D009051 1.4e-26 124.0 222 43.7
Ca_10302_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 9.1e-26 121.3 176 46.6
Lj5g0007724 Lotus japonicus HOM05D007468 ORTHO05D009051 1.6e-22 110.5 217 40.1
VMungo0720G2271 Vigna mungo HOM05D007468 ORTHO05D009051 7.9e-22 108.2 228 40.4
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 6.3e-19 98.6 194 37.6
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 2.4e-18 96.7 195 39.0
TPR.G19783 Trifolium pratense HOM05D007468 ORTHO05D009051 3.1e-18 96.3 251 34.3
CANSAT25G0675 Cannabis sativa HOM05D007468 ORTHO05D009051 5.3e-18 95.5 203 37.4
Medtr1g087720 Medicago truncatula HOM05D007468 ORTHO05D009051 5.3e-18 95.5 261 31.4
TAR365G0390 Trochodendron aralioides HOM05D007468 ORTHO05D009051 5.9e-17 92.0 175 37.7
PSO210G3413 Papaver somniferum HOM05D007468 ORTHO05D009051 7.7e-17 91.7 228 35.1
Aqoxy2G02809 Aquilegia oxysepala HOM05D007468 ORTHO05D009051 1.7e-16 90.5 176 36.4
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 1.7e-16 90.5 190 38.9
Sed0007650 Sechium edule HOM05D007468 ORTHO05D009051 1.7e-16 90.5 203 35.5
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 8.5e-16 88.2 190 38.4
TAR362G1257 Trochodendron aralioides HOM05D007468 ORTHO05D009051 8.5e-16 88.2 171 39.8
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 1.5e-15 87.4 190 38.4
ClCG09G005280 Citrullus lanatus HOM05D007468 ORTHO05D009051 1.9e-15 87.0 197 35.5
CsaV3_4G001100 Cucumis sativus L. HOM05D007468 ORTHO05D009051 3.2e-15 86.3 221 33.5
FAN04G2054 Fragaria x ananassa HOM05D007468 ORTHO05D009051 5.5e-15 85.5 210 37.1
Cpa.g.sc18.3 Carica papaya HOM05D007468 ORTHO05D009051 7.2e-15 85.1 224 33.9
Nn3g21627 Nelumbo nucifera HOM05D007468 ORTHO05D009051 1.2e-14 84.3 191 33.0
Cfa005843 Carpinus fangiana HOM05D007468 ORTHO05D009051 1.6e-14 84.0 185 34.1
Rhsim01G0289100 Rhododendron simsii HOM05D007468 ORTHO05D009051 2.1e-14 83.6 200 36.0
Gohir.D07G131600 Gossypium hirsutum HOM05D007468 ORTHO05D009051 3.6e-14 82.8 187 34.2
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 6.1e-14 82.0 173 34.7
Gorai.001G142900 Gossypium raimondii HOM05D007468 ORTHO05D009051 6.1e-14 82.0 187 34.2
Haze_05006 Corylus avellana HOM05D007468 ORTHO05D009051 1.0e-13 81.3 186 34.9
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 1.0e-13 81.3 214 35.0
RcHm_v2.0_Chr7g0241941 Rosa chinensis HOM05D007468 ORTHO05D009051 1.0e-13 81.3 173 38.2
Haze_05007 Corylus avellana HOM05D007468 ORTHO05D009051 1.4e-13 80.9 186 33.9
MELO3C017927.2 Cucumis melo HOM05D007468 ORTHO05D009051 1.4e-13 80.9 216 35.6
Duzib133G0259 Durio zibethinus HOM05D007468 ORTHO05D009051 1.8e-13 80.5 211 35.1
CiPaw.08G091800 Carya illinoinensis HOM05D007468 ORTHO05D009051 2.3e-13 80.1 220 32.3
Gohir.A07G127300 Gossypium hirsutum HOM05D007468 ORTHO05D009051 2.3e-13 80.1 190 35.3
Prupe.8G269500 Prunus persica HOM05D007468 ORTHO05D009051 3.0e-13 79.7 177 34.5
CAN.G668.23 Capsicum annuum HOM05D007468 ORTHO05D009051 4.0e-13 79.3 196 37.8
Thecc.01G309900 Theobroma cacao HOM05D007468 ORTHO05D009051 4.0e-13 79.3 211 33.6
ClCG10G011220 Citrullus lanatus HOM05D007468 ORTHO05D009051 1.2e-12 77.8 156 37.8
Duzib138G0571 Durio zibethinus HOM05D007468 ORTHO05D009051 1.5e-12 77.4 213 35.7
MBI19_g29995_MAGBIO Magnolia biondii HOM05D007468 ORTHO05D009051 1.5e-12 77.4 203 36.0
Peaxi162Scf00001g00282 Petunia axillaris HOM05D007468 ORTHO05D009051 1.5e-12 77.4 179 38.5
Manes.01G225500 Manihot esculenta HOM05D007468 ORTHO05D009051 2.6e-12 76.6 172 37.8
Sed0000824 Sechium edule HOM05D007468 ORTHO05D009051 3.3e-12 76.3 196 32.7
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 3.3e-12 76.3 182 37.4
Cc08_g11840 Coffea canephora HOM05D007468 ORTHO05D009051 4.4e-12 75.9 147 38.8
SHI19828 Sapria himalayana HOM05D007468 ORTHO05D009051 9.7e-12 74.7 222 31.5
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 1.7e-11 73.9 204 33.3
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 2.8e-11 73.2 204 33.3
PGSC0003DMG400031830 Solanum tuberosum HOM05D007468 ORTHO05D009051 2.8e-11 73.2 209 34.4
MELO3C015942.2 Cucumis melo HOM05D007468 ORTHO05D009051 3.7e-11 72.8 178 33.1
Potri.014G123500 Populus trichocarpa HOM05D007468 ORTHO05D009051 3.7e-11 72.8 208 36.5
Eucgr.H01069 Eucalyptus grandis HOM05D007468 ORTHO05D009051 8.2e-11 71.6 188 33.0
PGR044G1291 Punica granatum HOM05D007468 ORTHO05D009051 8.2e-11 71.6 220 35.0
Sabra14G0091900 Salix brachista HOM05D007468 ORTHO05D009051 1.1e-10 71.2 188 37.2
Sc05g0000570 Simmondsia chinensis HOM05D007468 ORTHO05D009051 1.1e-10 71.2 193 34.7
Lj1C20T8 Lonicera japonica HOM05D007468 ORTHO05D009051 1.4e-10 70.9 181 37.6
CiPaw.07G114800 Carya illinoinensis HOM05D007468 ORTHO05D009051 1.8e-10 70.5 215 29.3
Nitab4.5_0004002g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 1.8e-10 70.5 180 36.7
Nitab4.5_0000116g0050 Nicotiana tabacum HOM05D007468 ORTHO05D009051 3.1e-10 69.7 225 34.7
DCAR_002873 Daucus carota HOM05D007468 ORTHO05D009051 7.0e-10 68.6 190 32.6
CDE08G0146 Ceratophyllum demersum HOM05D007468 ORTHO05D009051 7.7e-09 65.1 179 31.3
SGA_v2.0_scaffold334G49050 Striga asiatica HOM05D007468 ORTHO05D009051 1.3e-08 64.3 212 33.0
Actinidia27604 Actinidia chinensis HOM05D007468 ORTHO05D009051 1.7e-08 63.9 188 34.0
Rhsim13G0006300 Rhododendron simsii HOM05D007468 ORTHO05D009051 1.9e-07 60.5 224 30.8
Oeu008452.1 Olea europaea HOM05D007468 ORTHO05D009051 3.2e-07 59.7 144 36.8
Potri.002G199100 Populus trichocarpa HOM05D007468 ORTHO05D009051 3.2e-07 59.7 203 31.0
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 5.5e-07 58.9 144 36.1
Gorai.008G141500 Gossypium raimondii HOM05D041120 ORTHO05D009051 1.2e-06 57.8 193 30.1
Nitab4.5_0002828g0030 Nicotiana tabacum HOM05D007468 ORTHO05D009051 1.6e-06 57.4 200 28.0
MBI18_g24947_MAGBIO Magnolia biondii HOM05D007468 ORTHO05D009051 2.7e-06 56.6 185 31.4
PSO357G0021 Papaver somniferum HOM05D007468 ORTHO05D009051 2.7e-06 56.6 206 27.7
Ciclev10024491m.g Citrus clementina HOM05D007468 ORTHO05D009051 3.6e-06 56.2 188 33.0
Gohir.D12G130200 Gossypium hirsutum HOM05D041120 ORTHO05D009051 4.7e-06 55.8 193 29.5


User provided reference genes

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