Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09199_v3 Cicer arietinum L. HOM05D007766 ORTHO05D009733 2.0e-132 475.7 235 100.0
TPR.G20299 Trifolium pratense HOM05D007766 ORTHO05D009733 3.6e-97 358.6 236 77.1
Medtr7g109280 Medicago truncatula HOM05D007766 ORTHO05D009733 2.6e-95 352.4 239 74.5
Psat3g020680 Pisum sativum HOM05D007766 ORTHO05D009733 1.0e-91 340.5 233 76.4
Phvul.001G211300 Phaseolus vulgaris HOM05D007766 ORTHO05D009733 2.5e-74 282.7 239 62.3
VMungo1383G0118 Vigna mungo HOM05D007766 ORTHO05D009733 1.3e-70 270.4 239 60.7
Glyma.19G214500 Glycine max HOM05D007766 ORTHO05D009733 2.3e-67 259.6 240 58.8
Lj1g0002879 Lotus japonicus HOM05D007766 ORTHO05D009733 4.3e-66 255.4 243 58.4
Lalb_Chr15g0078421 Lupinus albus HOM05D007766 ORTHO05D009733 2.3e-51 206.5 228 52.6
arahy.Tifrunner.gnm1.ann1.MEA9U7 Arachis hypogaea HOM05D007766 ORTHO05D009733 6.7e-51 204.9 212 54.7
Haze_04998 Corylus avellana HOM05D007766 ORTHO05D009733 7.4e-50 201.4 250 51.2
arahy.Tifrunner.gnm1.ann1.28FBJ8 Arachis hypogaea HOM05D007766 ORTHO05D009733 1.4e-48 197.2 215 52.6
Thecc.01G308600 Theobroma cacao HOM05D007766 ORTHO05D009733 1.6e-47 193.7 218 50.0
CANSAT25G3789 Cannabis sativa HOM05D007766 ORTHO05D009733 1.7e-46 190.3 252 46.8
Gohir.D12G131000 Gossypium hirsutum HOM05D007766 ORTHO05D009733 3.8e-46 189.1 218 51.4
Dinv33093 Davidia involucrata HOM05D007766 ORTHO05D009733 8.5e-46 188.0 262 48.5
Gorai.008G142300 Gossypium raimondii HOM05D007766 ORTHO05D009733 1.1e-45 187.6 218 51.4
ClCG09G005330 Citrullus lanatus HOM05D007766 ORTHO05D009733 5.5e-45 185.3 241 45.6
Manes.05G001200 Manihot esculenta HOM05D007766 ORTHO05D009733 5.5e-45 185.3 208 50.5
Gohir.A12G127500 Gossypium hirsutum HOM05D007766 ORTHO05D009733 7.2e-45 184.9 217 51.2
Eucgr.H01072 Eucalyptus grandis HOM05D007766 ORTHO05D009733 1.6e-44 183.7 251 45.0
COL.COLO4_23278 Corchorus olitorius HOM05D007766 ORTHO05D009733 8.0e-44 181.4 224 47.8
Duzib138G0131 Durio zibethinus HOM05D007766 ORTHO05D009733 8.0e-44 181.4 221 46.6
CiPaw.07G114200 Carya illinoinensis HOM05D007766 ORTHO05D009733 2.3e-43 179.9 248 46.4
Sabra14G0092600 Salix brachista HOM05D007766 ORTHO05D009733 4.0e-43 179.1 154 57.8
CSS0041323 Camellia sinensis var. sinensis HOM05D007766 ORTHO05D009733 5.7e-42 175.3 269 42.8
Carub.0001s0178 Capsella rubella HOM05D007766 ORTHO05D009733 1.3e-41 174.1 251 45.0
AT1G02700 Arabidopsis thaliana HOM05D007766 ORTHO05D009733 2.8e-41 172.9 252 44.0
PGR119G1997 Punica granatum HOM05D007766 ORTHO05D009733 4.8e-41 172.2 228 45.6
Actinidia27601 Actinidia chinensis HOM05D007766 ORTHO05D009733 6.3e-41 171.8 249 45.0
Cpa.g.sc151.50 Carica papaya HOM05D007766 ORTHO05D009733 6.3e-41 171.8 246 46.7
Nitab4.5_0000116g0120 Nicotiana tabacum HOM05D007766 ORTHO05D009733 8.2e-41 171.4 222 44.6
Potri.014G124500 Populus trichocarpa HOM05D007766 ORTHO05D009733 8.2e-41 171.4 246 44.3
CARHR002000 Cardamine hirsuta HOM05D007766 ORTHO05D009733 1.1e-40 171.0 251 43.8
Cfa005851 Carpinus fangiana HOM05D007766 ORTHO05D009733 1.1e-40 171.0 254 45.7
Prupe.8G268800 Prunus persica HOM05D007766 ORTHO05D009733 1.1e-40 171.0 174 55.2
PGSC0003DMG400031827 Solanum tuberosum HOM05D007766 ORTHO05D009733 1.1e-40 171.0 253 41.1
AL1G12070 Arabidopsis lyrata HOM05D007766 ORTHO05D009733 2.4e-40 169.9 253 43.5
QL12p028831 Quercus lobata HOM05D007766 ORTHO05D009733 2.4e-40 169.9 283 41.0
GSVIVG01028075001 Vitis vinifera HOM05D007766 ORTHO05D009733 4.1e-40 169.1 246 45.9
Nitab4.5_0000803g0050 Nicotiana tabacum HOM05D007766 ORTHO05D009733 9.1e-40 167.9 224 44.2
MD03G1298400 Malus domestica HOM05D007766 ORTHO05D009733 1.2e-39 167.5 256 44.1
ECA248G3735 Erigeron canadensis HOM05D007766 ORTHO05D009733 1.6e-39 167.2 186 47.8
RcHm_v2.0_Chr7g0241981 Rosa chinensis HOM05D007766 ORTHO05D009733 2.7e-39 166.4 222 45.5
CsaV3_7G029750 Cucumis sativus L. HOM05D007766 ORTHO05D009733 7.7e-39 164.9 236 42.8
Migut.D00109 Erythranthe guttata HOM05D007766 ORTHO05D009733 1.7e-38 163.7 226 42.0
TWI36G1235 Tripterygium wilfordii HOM05D007766 ORTHO05D009733 8.5e-38 161.4 215 45.1
Atru.chr5.1065 Acer truncatum HOM05D007766 ORTHO05D009733 1.1e-37 161.0 264 43.6
MELO3C015946.2 Cucumis melo HOM05D007766 ORTHO05D009733 1.9e-37 160.2 253 39.9
Cc01_g21240 Coffea canephora HOM05D007766 ORTHO05D009733 2.5e-37 159.8 254 40.6
HanXRQChr01g0000891 Helianthus annuus HOM05D007766 ORTHO05D009733 2.5e-37 159.8 182 46.2
Peaxi162Scf00001g00292 Petunia axillaris HOM05D007766 ORTHO05D009733 2.5e-37 159.8 234 39.7
Nn3g21607 Nelumbo nucifera HOM05D007766 ORTHO05D009733 5.5e-37 158.7 249 41.8
FAN18G0466 Fragaria x ananassa HOM05D007766 ORTHO05D009733 2.1e-36 156.8 228 44.7
FAN18G1064 Fragaria x ananassa HOM05D007766 ORTHO05D009733 2.1e-36 156.8 228 44.7
Lj1C21T2 Lonicera japonica HOM05D007766 ORTHO05D009733 4.7e-36 155.6 226 42.5
Sopen09g030400 Solanum pennellii HOM05D007766 ORTHO05D009733 6.1e-36 155.2 253 39.1
Sed0007654 Sechium edule HOM05D007766 ORTHO05D009733 1.4e-35 154.1 217 42.9
Ciclev10024028m.g Citrus clementina HOM05D007766 ORTHO05D009733 3.0e-35 152.9 148 58.8
BraA10t42417Z Brassica rapa HOM05D000768 ORTHO05D000665 8.8e-35 151.4 246 42.3
FAN08G1563 Fragaria x ananassa HOM05D007766 ORTHO05D009733 1.2e-34 151.0 216 44.0
FvH4_5g39680 Fragaria vesca HOM05D007766 ORTHO05D009733 2.0e-34 150.2 216 44.0
Lsat_1_v5_gn_5_190141 Lactuca sativa HOM05D007766 ORTHO05D009733 4.4e-34 149.1 219 42.9
BolC5t28921H Brassica oleracea HOM05D000768 ORTHO05D000665 2.2e-33 146.7 246 41.9
Aa31LG1G9860 Aethionema arabicum HOM05D007766 ORTHO05D009733 3.7e-33 146.0 222 43.7
vmacro02422 Vaccinium macrocarpon HOM05D007766 ORTHO05D009733 3.7e-33 146.0 216 44.9
C05p01390 Brassica napus HOM05D000768 ORTHO05D000665 8.3e-33 144.8 246 41.5
Rhsim13G0007300 Rhododendron simsii HOM05D007766 ORTHO05D009733 1.4e-32 144.1 161 50.9
EL10Ac7g17611 Beta vulgaris HOM05D007766 ORTHO05D009733 9.1e-32 141.4 203 43.8
Thhalv10008633m.g Eutrema salsugineum HOM05D007766 ORTHO05D009733 5.0e-30 135.6 243 39.5
SGA_v2.0_scaffold334G49048 Striga asiatica HOM05D007766 ORTHO05D009733 3.2e-29 132.9 242 36.8
TAR636G1646 Trochodendron aralioides HOM05D007766 ORTHO05D009733 1.6e-28 130.6 122 55.7
Sp1g01680 Schrenkiella parvula HOM05D007766 ORTHO05D009733 3.6e-28 129.4 243 37.9
DCAR_002867 Daucus carota HOM05D007766 ORTHO05D009733 4.7e-28 129.0 217 43.3
MBI18_g25084_MAGBIO Magnolia biondii HOM05D007766 ORTHO05D009733 6.8e-27 125.2 179 43.6
Sc17g0002970 Simmondsia chinensis HOM05D007766 ORTHO05D009733 1.5e-26 124.0 157 43.9
Aqoxy2G02831 Aquilegia oxysepala HOM05D007766 ORTHO05D009733 3.4e-26 122.9 209 37.3
Medtr8g023290 Medicago truncatula HOM05D007766 ORTHO05D009733 3.4e-26 122.9 158 51.3
Ah.15g092870 Amaranthus hybridus HOM05D007766 ORTHO05D009733 7.5e-26 121.7 225 35.6
PSO478G3523 Papaver somniferum HOM05D007766 ORTHO05D009733 6.3e-25 118.6 251 34.3
unitig_60.g25659 Utricularia gibba HOM05D001839 ORTHO05D001867 1.4e-24 117.5 97 58.8
A10p01420 Brassica napus HOM05D000768 ORTHO05D000665 3.1e-24 116.3 212 40.6
PSO782G1382 Papaver somniferum HOM05D007766 ORTHO05D009733 5.4e-24 115.5 232 35.8
CDE05G0244 Ceratophyllum demersum HOM05D007766 ORTHO05D009733 2.2e-17 93.6 129 45.0
Solyc09g075600.3 Solanum lycopersicum HOM05D007766 ORTHO05D009733 4.6e-15 85.9 80 51.2
Zm00001eb330520 Zea mays HOM05D007766 ORTHO05D009733 1.6e-12 77.4 102 43.1
Os07g0675200 Oryza sativa ssp. japonica HOM05D007766 ORTHO05D009733 7.0e-08 62.0 200 28.5
Actinidia21421 Actinidia chinensis HOM05D007766 ORTHO05D009733 7.8e-07 58.5 78 44.9
AUR62008743 Chenopodium quinoa HOM05D007766 ORTHO05D009733 1.3e-06 57.8 133 35.3


User provided reference genes

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