Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09155_v3 Cicer arietinum L. HOM05D005645 ORTHO05D007156 8.8e-181 636.7 300 100.0
Medtr7g108820 Medicago truncatula HOM05D005645 ORTHO05D007156 3.3e-135 485.3 307 76.2
Medtr8g058520 Medicago truncatula HOM05D005645 ORTHO05D007156 3.3e-135 485.3 307 76.2
TPR.G9640 Trifolium pratense HOM05D005645 ORTHO05D007156 6.2e-134 481.1 301 75.4
Psat3g022200 Pisum sativum HOM05D005645 ORTHO05D007156 4.9e-131 471.5 315 74.0
Lj1g0011611 Lotus japonicus HOM05D005645 ORTHO05D007156 6.7e-112 407.9 308 64.3
VMungo1383G2661 Vigna mungo HOM05D005645 ORTHO05D007156 3.1e-101 372.5 312 60.6
Glyma.03G214300 Glycine max HOM05D005645 ORTHO05D007156 8.5e-99 364.4 320 56.6
Phvul.001G207000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 1.1e-98 364.0 319 58.3
CiPaw.08G095700 Carya illinoinensis HOM05D005645 ORTHO05D007156 4.6e-97 358.6 330 55.5
Dinv19699 Davidia involucrata HOM05D005645 ORTHO05D007156 7.9e-97 357.8 332 55.1
Cfa005921 Carpinus fangiana HOM05D005645 ORTHO05D007156 1.0e-96 357.5 334 55.4
PGR119G1100 Punica granatum HOM05D005645 ORTHO05D007156 2.3e-96 356.3 322 56.5
Atru.chr5.1154 Acer truncatum HOM05D005645 ORTHO05D007156 5.1e-96 355.1 320 56.6
Lj2P1193T28 Lonicera japonica HOM05D005645 ORTHO05D007156 1.1e-95 354.0 329 56.2
CSS0005125 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 1.5e-95 353.6 324 55.6
MBI19_g25350_MAGBIO Magnolia biondii HOM05D005645 ORTHO05D007156 4.3e-95 352.1 335 53.1
Hma1.2p1_0491F.1_g164480 Hydrangea macrophylla HOM05D005645 ORTHO05D007156 9.7e-95 350.9 343 54.2
RcHm_v2.0_Chr6g0293871 Rosa chinensis HOM05D005645 ORTHO05D007156 1.7e-94 350.1 317 55.2
Potri.002G205150 Populus trichocarpa HOM05D005645 ORTHO05D007156 6.3e-94 348.2 329 52.6
QL12p028562 Quercus lobata HOM05D005645 ORTHO05D007156 6.3e-94 348.2 327 55.0
Rhsim01G0284600 Rhododendron simsii HOM05D005645 ORTHO05D007156 1.1e-93 347.4 333 55.0
COL.COLO4_23354 Corchorus olitorius HOM05D005645 ORTHO05D007156 4.1e-93 345.5 323 54.2
Ciclev10021114m.g Citrus clementina HOM05D005645 ORTHO05D007156 1.2e-92 344.0 325 53.2
ClCG10G010870 Citrullus lanatus HOM05D005645 ORTHO05D007156 2.0e-92 343.2 328 53.7
Manes.05G062500 Manihot esculenta HOM05D005645 ORTHO05D007156 2.0e-92 343.2 323 53.3
Thecc.01G299500 Theobroma cacao HOM05D005645 ORTHO05D007156 2.0e-92 343.2 330 53.6
Cpa.g.c27813 Carica papaya HOM05D005645 ORTHO05D007156 2.6e-92 342.8 318 54.4
CsaV3_4G000750 Cucumis sativus L. HOM05D005645 ORTHO05D007156 7.7e-92 341.3 333 52.9
Aqoxy2G02954 Aquilegia oxysepala HOM05D005645 ORTHO05D007156 1.7e-91 340.1 324 54.0
MD03G1287400 Malus domestica HOM05D005645 ORTHO05D007156 2.2e-91 339.7 335 50.7
Duzib138G1290 Durio zibethinus HOM05D005645 ORTHO05D007156 2.9e-91 339.3 327 54.1
Gohir.D08G085100 Gossypium hirsutum HOM05D005645 ORTHO05D007156 3.8e-91 339.0 330 53.9
EL10Ac7g17501 Beta vulgaris HOM05D005645 ORTHO05D007156 1.1e-90 337.4 330 53.0
Cc01_g20770 Coffea canephora HOM05D005645 ORTHO05D007156 1.1e-90 337.4 325 54.2
Peaxi162Scf00001g00452 Petunia axillaris HOM05D005645 ORTHO05D007156 1.4e-90 337.0 334 53.9
Migut.D00211 Erythranthe guttata HOM05D005645 ORTHO05D007156 1.9e-90 336.7 322 53.1
Sabra02G0154200 Salix brachista HOM05D005645 ORTHO05D007156 1.9e-90 336.7 330 53.3
arahy.Tifrunner.gnm1.ann1.LF73V2 Arachis hypogaea HOM05D005645 ORTHO05D007156 2.5e-90 336.3 309 56.6
Nitab4.5_0001879g0020 Nicotiana tabacum HOM05D005645 ORTHO05D007156 2.5e-90 336.3 328 53.0
Duzib133G0671 Durio zibethinus HOM05D005645 ORTHO05D007156 3.2e-90 335.9 330 52.1
Duzib211G0390 Durio zibethinus HOM05D005645 ORTHO05D007156 5.5e-90 335.1 327 53.5
Sopen09g029900 Solanum pennellii HOM05D005645 ORTHO05D007156 7.2e-90 334.7 322 54.7
Carub.0006s3469 Capsella rubella HOM05D005645 ORTHO05D007156 9.4e-90 334.3 321 52.0
TAR365G0052 Trochodendron aralioides HOM05D005645 ORTHO05D007156 1.2e-89 334.0 318 52.8
Gorai.004G089600 Gossypium raimondii HOM05D005645 ORTHO05D007156 1.6e-89 333.6 330 53.3
Gohir.A08G075600 Gossypium hirsutum HOM05D005645 ORTHO05D007156 3.6e-89 332.4 327 53.8
THA.LOC109115977 Tarenaya hassleriana HOM05D005645 ORTHO05D007156 3.6e-89 332.4 329 51.7
Potri.014G130000 Populus trichocarpa HOM05D005645 ORTHO05D007156 4.7e-89 332.0 327 51.7
Gohir.A12G130800 Gossypium hirsutum HOM05D005645 ORTHO05D007156 1.0e-88 330.9 327 52.6
CANSAT25G0541 Cannabis sativa HOM05D005645 ORTHO05D007156 1.8e-88 330.1 330 50.0
PGSC0003DMG400011401 Solanum tuberosum HOM05D005645 ORTHO05D007156 1.8e-88 330.1 327 53.8
Solyc09g075080.3 Solanum lycopersicum HOM05D005645 ORTHO05D007156 2.3e-88 329.7 322 54.0
Gorai.008G145600 Gossypium raimondii HOM05D005645 ORTHO05D007156 5.1e-88 328.6 328 53.0
Sed0014780 Sechium edule HOM05D005645 ORTHO05D007156 5.1e-88 328.6 322 50.9
TWI23G0499 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 6.7e-88 328.2 327 52.9
Aa31LG5G2090 Aethionema arabicum HOM05D005645 ORTHO05D007156 1.5e-87 327.0 333 50.5
CiPaw.07G108000 Carya illinoinensis HOM05D005645 ORTHO05D007156 1.5e-87 327.0 330 52.1
Sabra14G0096600 Salix brachista HOM05D005645 ORTHO05D007156 5.7e-87 325.1 328 50.6
CAN.G1628.1 Capsicum annuum HOM05D005645 ORTHO05D007156 1.7e-86 323.6 321 53.3
Eucgr.H01116 Eucalyptus grandis HOM05D005645 ORTHO05D007156 3.7e-86 322.4 339 50.4
Sp6g02350 Schrenkiella parvula HOM05D005645 ORTHO05D007156 3.7e-86 322.4 331 50.5
Sed0022873 Sechium edule HOM05D005645 ORTHO05D007156 8.2e-86 321.2 317 51.7
Lalb_Chr18g0047021 Lupinus albus HOM05D005645 ORTHO05D007156 1.4e-85 320.5 321 53.3
AL6G50630 Arabidopsis lyrata HOM05D005645 ORTHO05D007156 2.4e-85 319.7 324 51.9
AUR62008638 Chenopodium quinoa HOM05D005645 ORTHO05D007156 3.1e-85 319.3 349 49.6
Sc09g0004020 Simmondsia chinensis HOM05D005645 ORTHO05D007156 3.1e-85 319.3 316 52.2
AUR62033135 Chenopodium quinoa HOM05D005645 ORTHO05D007156 4.1e-85 318.9 359 48.2
TAR370G0004 Trochodendron aralioides HOM05D005645 ORTHO05D007156 4.1e-85 318.9 325 49.8
DCAR_002826 Daucus carota HOM05D005645 ORTHO05D007156 5.3e-85 318.5 334 50.3
Dinv33051 Davidia involucrata HOM05D005645 ORTHO05D007156 5.3e-85 318.5 305 53.8
Nn4g25798 Nelumbo nucifera HOM05D005645 ORTHO05D007156 5.3e-85 318.5 333 50.8
SalBow3G0280 Salvia bowleyana HOM05D005645 ORTHO05D007156 9.1e-85 317.8 329 51.4
Prupe.8G260500 Prunus persica HOM05D005645 ORTHO05D007156 2.6e-84 316.2 324 51.9
AT4G02440 Arabidopsis thaliana HOM05D005645 ORTHO05D007156 3.5e-84 315.8 333 48.6
FAN27G1772 Fragaria x ananassa HOM05D005645 ORTHO05D007156 3.5e-84 315.8 310 50.6
Lsat_1_v5_gn_5_191140 Lactuca sativa HOM05D005645 ORTHO05D007156 3.5e-84 315.8 333 47.7
PSO210G7211 Papaver somniferum HOM05D005645 ORTHO05D007156 3.5e-84 315.8 332 49.7
PSO170G2082 Papaver somniferum HOM05D005645 ORTHO05D007156 7.7e-84 314.7 333 49.5
SGA_v2.0_scaffold2G01399 Striga asiatica HOM05D005645 ORTHO05D007156 1.3e-83 313.9 331 49.2
FvH4_2g25611 Fragaria vesca HOM05D005645 ORTHO05D007156 1.7e-83 313.5 313 50.5
Lsat_1_v5_gn_8_53521 Lactuca sativa HOM05D005645 ORTHO05D007156 1.7e-83 313.5 330 49.1
SGA_v2.0_scaffold1G00372 Striga asiatica HOM05D005645 ORTHO05D007156 1.7e-83 313.5 326 50.9
ECA236G0211 Erigeron canadensis HOM05D005645 ORTHO05D007156 5.0e-83 312.0 336 48.5
BcaB01g02041 Brassica carinata HOM05D005645 ORTHO05D007156 6.5e-83 311.6 355 47.0
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 6.5e-83 311.6 308 51.0
Actinidia21051 Actinidia chinensis HOM05D005645 ORTHO05D007156 1.1e-82 310.8 308 53.6
MD11G1310800 Malus domestica HOM05D005645 ORTHO05D007156 1.5e-82 310.5 340 48.2
HPP92_025206 Vanilla planifolia HOM05D005645 ORTHO05D007156 2.5e-82 309.7 318 51.6
HanXRQChr04g0118021 Helianthus annuus HOM05D005645 ORTHO05D007156 4.2e-82 308.9 338 49.1
CARHR250710 Cardamine hirsuta HOM05D005645 ORTHO05D007156 2.7e-81 306.2 328 49.1
Lalb_Chr06g0163461 Lupinus albus HOM05D005645 ORTHO05D007156 4.4e-79 298.9 299 51.5
Migut.N01502 Erythranthe guttata HOM05D005645 ORTHO05D007156 1.3e-78 297.4 310 50.3
GSVIVG01028000001 Vitis vinifera HOM05D005645 ORTHO05D007156 1.7e-78 297.0 306 49.3
C09p01980 Brassica napus HOM05D005645 ORTHO05D007156 1.8e-77 293.5 379 44.3
BcaNung04054 Brassica carinata HOM05D005645 ORTHO05D007156 1.7e-75 287.0 395 43.0
ATR0796G303 Amborella trichopoda HOM05D005645 ORTHO05D007156 6.5e-75 285.0 426 40.1
Oeu011455.1 Olea europaea HOM05D005645 ORTHO05D007156 1.1e-74 284.3 307 47.6
BraA09t35841Z Brassica rapa HOM05D005645 ORTHO05D007156 4.2e-74 282.3 389 43.4
CSS0029794 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 4.2e-74 282.3 306 50.7
BolC9t53130H Brassica oleracea HOM05D005645 ORTHO05D007156 2.1e-73 280.0 395 42.3
DCAR_018339 Daucus carota HOM05D005645 ORTHO05D007156 2.1e-73 280.0 314 46.8
Nitab4.5_0008207g0010 Nicotiana tabacum HOM05D005645 ORTHO05D007156 8.0e-73 278.1 295 50.5
CDE11G0431 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 4.0e-72 275.8 280 50.7
A09p01900 Brassica napus HOM05D005645 ORTHO05D007156 2.0e-71 273.5 404 41.1
VMungo0720G2164 Vigna mungo HOM05D005645 ORTHO05D007156 2.2e-70 270.0 296 45.9
Glyma.02G018450 Glycine max HOM05D005645 ORTHO05D007156 1.4e-69 267.3 298 46.3
FAN15G1997 Fragaria x ananassa HOM05D005645 ORTHO05D007156 2.4e-69 266.5 280 48.9
Phvul.007G146000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 7.7e-68 261.5 296 45.6
Zm00001eb346660 Zea mays HOM05D005645 ORTHO05D007156 6.5e-67 258.5 353 41.9
Os05g0365000 Oryza sativa ssp. japonica HOM05D005645 ORTHO05D007156 2.1e-65 253.4 324 42.3
arahy.Tifrunner.gnm1.ann1.UILT17 Arachis hypogaea HOM05D005645 ORTHO05D007156 1.4e-64 250.8 302 47.0
BcaNung05002 Brassica carinata HOM05D005645 ORTHO05D007156 3.0e-64 249.6 252 50.8
MELO3C017961.2 Cucumis melo HOM05D005645 ORTHO05D007156 5.2e-64 248.8 161 68.3
arahy.Tifrunner.gnm1.ann1.G1675E Arachis hypogaea HOM05D005645 ORTHO05D007156 4.4e-63 245.7 303 45.9
Nn3g21470 Nelumbo nucifera HOM05D005645 ORTHO05D007156 1.7e-62 243.8 280 48.2
CAN.G339.1 Capsicum annuum HOM05D005645 ORTHO05D007156 3.1e-61 239.6 284 47.5
Actinidia24827 Actinidia chinensis HOM05D005645 ORTHO05D007156 9.2e-61 238.0 271 49.4
SHI29059 Sapria himalayana HOM05D005645 ORTHO05D007156 2.7e-60 236.5 294 41.8
Mapoly0034s0045 Marchantia polymorpha HOM05D005645 ORTHO05D007156 1.8e-56 223.8 391 36.6
Pp3c4_3650 Physcomitrium patens HOM05D005645 ORTHO05D007156 1.2e-55 221.1 363 36.4
HPP92_018255 Vanilla planifolia HOM05D005645 ORTHO05D007156 2.7e-52 209.9 301 38.9
SEGI_05916 Sequoiadendron giganteum HOM05D005645 ORTHO05D007156 3.0e-51 206.5 485 30.5
SMO331G0040 Selaginella moellendorffii HOM05D005645 ORTHO05D007156 6.2e-49 198.7 313 35.8
AagrBONN_evm.TU.Sc2ySwM_228.5415 Anthoceros agrestis HOM05D005645 ORTHO05D007156 5.2e-48 195.7 421 30.2
Pp3c12_6520 Physcomitrium patens HOM05D005645 ORTHO05D007156 3.4e-47 193.0 417 30.9
MD05G1102300 Malus domestica HOM05D005645 ORTHO05D007156 7.8e-36 155.2 99 64.6
AagrBONN_evm.TU.Sc2ySwM_117.1647 Anthoceros agrestis HOM05D005645 ORTHO05D007156 4.3e-34 149.4 412 26.2
Haze_04926 Corylus avellana HOM05D005645 ORTHO05D007156 3.6e-33 146.4 221 44.3
Haze_04922 Corylus avellana HOM05D005645 ORTHO05D007156 1.0e-27 128.3 209 42.6
CDE05G1077 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 5.4e-21 105.9 165 42.4
TWI59G0946 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 1.6e-20 104.4 167 39.5
Oeu046686.1 Olea europaea HOM05D005645 ORTHO05D007156 5.6e-18 95.9 226 32.3
unitig_0.g662 Utricularia gibba HOM05D005645 ORTHO05D007156 1.4e-13 81.3 93 40.9
Migut.H00651 Erythranthe guttata HOM05D002394 ORTHO05D002508 2.6e-07 60.5 119 33.6
SEGI_33966 Sequoiadendron giganteum HOM05D002394 ORTHO05D002508 2.6e-07 60.5 127 32.3
Aqoxy3G00464 Aquilegia oxysepala HOM05D002394 ORTHO05D002508 3.4e-07 60.1 123 32.5
Psat3g200840 Pisum sativum HOM05D002394 ORTHO05D002508 3.4e-07 60.1 123 31.7
Duzib187G0279 Durio zibethinus HOM05D002394 ORTHO05D002508 5.8e-07 59.3 123 32.5
Gohir.A05G370466 Gossypium hirsutum HOM05D002394 ORTHO05D002508 5.8e-07 59.3 123 31.7
Gohir.A05G370600 Gossypium hirsutum HOM05D002394 ORTHO05D002508 5.8e-07 59.3 123 31.7
Gohir.D04G045000 Gossypium hirsutum HOM05D002394 ORTHO05D002508 5.8e-07 59.3 123 31.7
Gorai.012G050200 Gossypium raimondii HOM05D002394 ORTHO05D002508 5.8e-07 59.3 123 31.7
arahy.Tifrunner.gnm1.ann1.GVJS70 Arachis hypogaea HOM05D002394 ORTHO05D002508 9.9e-07 58.5 123 30.9
Lj3g0026743 Lotus japonicus HOM05D002394 ORTHO05D002508 9.9e-07 58.5 123 31.7
Oeu014750.1 Olea europaea HOM05D002394 ORTHO05D002508 9.9e-07 58.5 128 30.5
Oeu014752.1 Olea europaea HOM05D002394 ORTHO05D002508 9.9e-07 58.5 128 30.5
arahy.Tifrunner.gnm1.ann1.56XWA4 Arachis hypogaea HOM05D002394 ORTHO05D002508 1.3e-06 58.2 123 31.7
DCAR_011055 Daucus carota HOM05D002394 ORTHO05D002508 1.3e-06 58.2 123 32.5
TAR371G0698 Trochodendron aralioides HOM05D002394 ORTHO05D002508 1.3e-06 58.2 123 32.5
CiPaw.04G058200 Carya illinoinensis HOM05D002394 ORTHO05D002508 2.2e-06 57.4 123 31.7
Ca_06809_v3 Cicer arietinum L. HOM05D002394 ORTHO05D002508 2.2e-06 57.4 123 30.9
Duzib264G0540 Durio zibethinus HOM05D002394 ORTHO05D002508 2.2e-06 57.4 123 31.7
QL02p039501 Quercus lobata HOM05D002394 ORTHO05D002508 2.2e-06 57.4 123 31.7
Rhsim08G0073700 Rhododendron simsii HOM05D002394 ORTHO05D002508 2.2e-06 57.4 125 34.4
Duzib147G0526 Durio zibethinus HOM05D002394 ORTHO05D002508 2.9e-06 57.0 123 32.5
Phvul.005G159500 Phaseolus vulgaris HOM05D002394 ORTHO05D002508 2.9e-06 57.0 123 32.5
VMungo1080G1371 Vigna mungo HOM05D002394 ORTHO05D002508 2.9e-06 57.0 123 32.5
CSS0007324 Camellia sinensis var. sinensis HOM05D002394 ORTHO05D002508 3.8e-06 56.6 123 31.7
CSS0014787 Camellia sinensis var. sinensis HOM05D002394 ORTHO05D002508 3.8e-06 56.6 123 31.7
CSS0019800 Camellia sinensis var. sinensis HOM05D002394 ORTHO05D002508 3.8e-06 56.6 123 31.7
CSS0030202 Camellia sinensis var. sinensis HOM05D002394 ORTHO05D002508 3.8e-06 56.6 123 31.7
CSS0038318 Camellia sinensis var. sinensis HOM05D002394 ORTHO05D002508 3.8e-06 56.6 123 31.7
Migut.K01292 Erythranthe guttata HOM05D002394 ORTHO05D002508 3.8e-06 56.6 123 32.5
SHI16429 Sapria himalayana HOM05D002394 ORTHO05D002508 3.8e-06 56.6 125 31.2
ATR0064G118 Amborella trichopoda HOM05D002394 ORTHO05D002508 4.9e-06 56.2 123 30.9
COL.COLO4_21379 Corchorus olitorius HOM05D002394 ORTHO05D002508 4.9e-06 56.2 123 30.1
Atru.chr8.389 Acer truncatum HOM05D002394 ORTHO05D002508 6.4e-06 55.8 123 30.9
A03p07140 Brassica napus HOM05D002394 ORTHO05D002508 6.4e-06 55.8 120 30.8
BraA03t10036Z Brassica rapa HOM05D002394 ORTHO05D002508 6.4e-06 55.8 120 30.8
Ciclev10012574m.g Citrus clementina HOM05D002394 ORTHO05D002508 6.4e-06 55.8 127 29.9
Zm00001eb326680 Zea mays HOM05D002394 ORTHO05D002508 6.4e-06 55.8 123 31.7
BcaB01g05054 Brassica carinata HOM05D002394 ORTHO05D002508 8.4e-06 55.5 120 30.8
BcaB01g05056 Brassica carinata HOM05D002394 ORTHO05D002508 8.4e-06 55.5 120 30.8
C03p08130 Brassica napus HOM05D002394 ORTHO05D002508 8.4e-06 55.5 120 30.8
BolC3t13310H Brassica oleracea HOM05D002394 ORTHO05D002508 8.4e-06 55.5 120 30.8
Cc07_g03920 Coffea canephora HOM05D002394 ORTHO05D002508 8.4e-06 55.5 123 31.7
Haze_14470 Corylus avellana HOM05D002394 ORTHO05D002508 8.4e-06 55.5 123 30.9
Medtr7g012790 Medicago truncatula HOM05D002394 ORTHO05D002508 8.4e-06 55.5 123 30.1


User provided reference genes

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