Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 3.8e-137 491.5 251 100.0
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 2.8e-103 379.0 264 78.4
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 4.7e-103 378.3 264 76.5
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 3.9e-89 332.0 263 69.6
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 1.5e-88 330.1 263 70.7
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 7.6e-85 317.8 261 67.4
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 4.2e-83 312.0 263 65.8
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 3.5e-82 308.9 264 65.9
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 1.8e-81 306.6 263 65.0
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 1.3e-73 280.4 262 61.5
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 1.3e-73 280.4 264 61.7
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 2.3e-49 199.9 250 51.2
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 2.0e-48 196.8 234 46.6
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 2.8e-47 193.0 257 46.7
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 3.7e-47 192.6 266 47.4
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 8.2e-47 191.4 235 45.1
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 1.2e-45 187.6 225 49.8
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 2.0e-45 186.8 228 48.7
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 5.9e-45 185.3 227 48.5
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 7.7e-45 184.9 229 47.6
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 7.7e-45 184.9 229 47.2
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 1.0e-44 184.5 261 45.2
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 1.0e-44 184.5 245 47.3
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 2.2e-44 183.3 226 47.3
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.1e-43 181.0 256 46.5
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 1.9e-43 180.3 262 43.5
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 3.6e-42 176.0 261 41.4
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 3.6e-42 176.0 263 42.2
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 8.0e-42 174.9 267 44.6
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 8.0e-42 174.9 226 47.8
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 1.8e-41 173.7 222 46.8
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 8.8e-41 171.4 226 46.9
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 8.8e-41 171.4 221 45.7
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 2.2e-39 166.8 246 43.9
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 2.8e-39 166.4 262 39.3
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 1.8e-38 163.7 230 44.3
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 2.4e-38 163.3 255 44.3
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 9.1e-38 161.4 254 43.3
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 3.5e-37 159.5 257 40.5
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 4.5e-37 159.1 228 45.2
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 7.7e-37 158.3 255 43.5
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 7.7e-37 158.3 245 42.0
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 1.0e-36 157.9 231 44.2
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 1.0e-36 157.9 257 40.5
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 1.3e-36 157.5 196 49.0
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 1.3e-36 157.5 242 43.4
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 3.8e-36 156.0 245 42.0
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 3.8e-36 156.0 260 38.5
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 5.0e-36 155.6 219 44.7
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 5.0e-36 155.6 257 38.5
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 6.5e-36 155.2 233 44.6
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 8.5e-36 154.8 257 42.0
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 2.5e-35 153.3 227 41.9
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 2.5e-35 153.3 257 41.6
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 7.2e-35 151.8 249 43.4
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.2e-34 151.0 245 42.4
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 1.6e-34 150.6 226 42.9
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 4.7e-34 149.1 219 43.8
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.2e-32 144.4 251 39.4
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 2.6e-32 143.3 230 38.7
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 5.7e-32 142.1 251 39.0
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 2.8e-31 139.8 214 42.1
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 3.7e-31 139.4 217 38.2
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 8.3e-31 138.3 243 42.0
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 5.4e-30 135.6 268 35.1
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 7.0e-30 135.2 248 38.3
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 9.1e-30 134.8 254 37.8
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 9.1e-30 134.8 221 38.5
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 1.2e-29 134.4 252 39.3
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 5.0e-28 129.0 255 36.9
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 1.1e-27 127.9 213 39.9
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 1.5e-27 127.5 267 34.8
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 2.5e-27 126.7 81 72.8
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 2.5e-27 126.7 258 39.1
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 5.5e-27 125.6 219 37.9
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 1.6e-26 124.0 267 36.0
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 2.3e-25 120.2 211 38.9
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 3.0e-25 119.8 217 37.3
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 3.7e-23 112.8 154 46.1
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 8.3e-23 111.7 74 70.3
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 1.8e-22 110.5 222 37.4
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 1.2e-21 107.8 101 54.5
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 5.9e-21 105.5 129 45.7
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 5.9e-21 105.5 209 37.8
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 7.7e-21 105.1 130 47.7
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 1.0e-20 104.8 319 31.0
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 1.3e-20 104.4 102 52.0
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 1.3e-20 104.4 102 52.0
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 1.3e-20 104.4 102 52.0
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 3.8e-20 102.8 135 44.4
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 3.8e-20 102.8 135 44.4
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 6.6e-20 102.1 160 40.0
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 8.6e-20 101.7 86 57.0
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 1.9e-19 100.5 131 45.0
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 7.3e-19 98.6 84 56.0
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 5.2e-17 92.4 82 51.2
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 1.2e-16 91.3 230 33.5
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 1.3e-15 87.8 82 51.2
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 5.4e-14 82.4 61 63.9
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 4.7e-10 69.3 80 40.0
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 1.5e-08 64.3 98 37.8


User provided reference genes

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