Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 7.4e-83 310.5 154 100.0
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 4.7e-77 291.2 154 92.9
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 3.4e-75 285.0 154 90.9
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 2.8e-74 282.0 154 90.3
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 1.0e-71 273.5 154 84.4
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 1.3e-71 273.1 154 84.4
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 1.5e-70 269.6 152 84.2
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 8.0e-69 263.8 154 83.1
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 4.0e-68 261.5 153 83.0
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 1.2e-67 260.0 145 84.8
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 2.6e-67 258.8 154 79.2
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 9.8e-67 256.9 152 80.3
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 8.3e-66 253.8 151 78.8
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 1.4e-65 253.1 152 77.6
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 1.8e-65 252.7 150 80.7
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 2.4e-65 252.3 151 77.5
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 3.1e-65 251.9 150 77.3
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 4.1e-65 251.5 149 79.9
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 7.0e-65 250.8 152 77.0
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 9.1e-65 250.4 152 78.9
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 1.6e-64 249.6 152 77.6
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 1.6e-64 249.6 158 75.3
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 2.0e-64 249.2 158 74.7
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 2.0e-64 249.2 151 78.1
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 2.7e-64 248.8 149 77.9
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 2.7e-64 248.8 150 80.0
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 2.7e-64 248.8 152 77.0
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 2.7e-64 248.8 151 76.2
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 4.5e-64 248.1 157 74.5
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 7.7e-64 247.3 149 79.9
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 1.0e-63 246.9 157 73.9
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 1.0e-63 246.9 150 76.0
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 1.0e-63 246.9 152 76.3
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 2.9e-63 245.4 158 74.7
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 5.0e-63 244.6 150 74.7
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 6.6e-63 244.2 150 76.0
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 8.6e-63 243.8 150 72.7
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 1.5e-62 243.0 149 75.8
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 1.5e-62 243.0 150 74.7
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 1.5e-62 243.0 152 74.3
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 1.5e-62 243.0 152 74.3
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 1.9e-62 242.7 158 74.1
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 3.3e-62 241.9 150 76.0
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 3.3e-62 241.9 158 73.4
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 3.3e-62 241.9 143 79.7
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 3.3e-62 241.9 145 77.9
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 4.2e-62 241.5 152 71.7
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 4.2e-62 241.5 154 72.7
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 5.5e-62 241.1 152 75.0
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 7.2e-62 240.7 150 76.0
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 9.5e-62 240.4 149 74.5
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 9.5e-62 240.4 146 76.7
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 1.6e-61 239.6 154 72.1
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 2.8e-61 238.8 146 76.0
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 3.6e-61 238.4 149 75.2
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 3.6e-61 238.4 149 75.2
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 3.6e-61 238.4 152 73.7
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 4.7e-61 238.0 154 71.4
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 6.1e-61 237.7 150 74.7
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 8.0e-61 237.3 149 73.8
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 1.4e-60 236.5 148 74.3
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 1.4e-60 236.5 150 70.7
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 2.3e-60 235.7 154 70.8
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 2.3e-60 235.7 152 71.7
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 3.0e-60 235.3 154 70.8
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 4.0e-60 235.0 152 71.7
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 4.0e-60 235.0 150 72.0
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 6.8e-60 234.2 157 72.6
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 6.8e-60 234.2 147 75.5
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 1.5e-59 233.0 153 70.6
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 2.0e-59 232.6 148 71.6
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 3.4e-59 231.9 145 73.8
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 3.4e-59 231.9 149 72.5
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 4.4e-59 231.5 153 71.2
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 1.7e-58 229.6 152 73.0
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 2.9e-58 228.8 150 69.3
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 2.9e-58 228.8 153 69.3
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 6.3e-58 227.6 153 69.3
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 8.3e-58 227.3 152 69.7
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 8.3e-58 227.3 145 73.1
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 1.1e-57 226.9 148 70.3
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 1.4e-57 226.5 149 70.5
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 1.8e-57 226.1 148 74.3
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 4.1e-57 224.9 150 72.7
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 9.2e-57 223.8 134 79.1
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 9.2e-57 223.8 152 67.8
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 9.2e-57 223.8 148 69.6
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 1.2e-56 223.4 146 73.3
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 2.7e-56 222.2 150 71.3
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 7.8e-56 220.7 148 72.3
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 1.7e-55 219.5 150 70.0
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 2.3e-55 219.2 148 70.9
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 1.1e-54 216.9 150 70.0
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 2.5e-54 215.7 148 69.6
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 5.6e-54 214.5 148 69.6
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 7.3e-54 214.2 148 69.6
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 9.5e-54 213.8 152 65.8
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 1.2e-53 213.4 148 68.9
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 1.6e-53 213.0 148 68.2
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 2.1e-53 212.6 148 68.2
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 2.8e-53 212.2 148 68.2
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 2.8e-53 212.2 148 70.3
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 4.7e-53 211.5 148 68.2
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 4.7e-53 211.5 148 68.2
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 1.0e-52 210.3 153 65.4
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 1.4e-52 209.9 148 67.6
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 5.2e-52 208.0 143 65.7
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 6.8e-52 207.6 148 63.5
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 1.2e-51 206.8 141 66.7
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 2.2e-50 202.6 146 63.0
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 1.0e-47 193.7 121 74.4
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 6.6e-47 191.0 148 64.9
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 8.6e-47 190.7 145 59.3
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 1.4e-44 183.3 123 69.9
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 2.9e-42 175.6 126 68.3
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 2.1e-40 169.5 99 80.8
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 3.9e-39 165.2 148 52.0
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 2.5e-38 162.5 131 58.8
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 2.5e-38 162.5 143 53.8
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 3.3e-38 162.2 143 55.9
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 4.3e-38 161.8 146 50.7
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 1.6e-37 159.8 137 59.9
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 3.6e-37 158.7 112 68.8
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 7.6e-35 151.0 144 52.1
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 2.1e-32 142.9 100 65.0
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 1.9e-30 136.3 142 49.3
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 3.3e-30 135.6 97 64.9
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 2.1e-29 132.9 140 49.3
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 5.2e-28 128.3 145 46.9
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 9.9e-27 124.0 152 47.4
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 1.6e-24 116.7 141 46.8
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 2.1e-21 106.3 85 57.6
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 3.6e-21 105.5 74 63.5
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 4.0e-20 102.1 83 56.6


User provided reference genes

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