Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 3.5e-158 561.6 287 100.0
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 2.0e-129 466.1 344 73.3
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 3.2e-127 458.8 344 71.2
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 7.0e-127 457.6 344 71.8
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 5.0e-125 451.4 345 70.4
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 3.6e-123 445.3 346 69.1
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 1.4e-122 443.4 345 68.7
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 1.5e-121 439.9 347 69.2
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 5.8e-121 438.0 352 66.8
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 1.7e-120 436.4 352 67.0
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 3.7e-120 435.3 346 67.1
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 1.7e-109 399.8 350 63.1
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 3.9e-109 398.7 345 62.3
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 1.2e-107 393.7 344 61.0
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 1.8e-106 389.8 344 60.8
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 2.4e-106 389.4 344 58.7
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 3.1e-106 389.0 344 58.7
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 5.2e-106 388.3 344 61.0
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 3.4e-105 385.6 344 59.6
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 3.4e-105 385.6 342 60.8
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.3e-104 383.6 344 59.3
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 1.7e-104 383.3 273 71.4
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 2.9e-104 382.5 344 59.0
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 8.4e-104 380.9 344 57.6
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 8.4e-104 380.9 344 57.6
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 1.1e-103 380.6 342 59.6
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.1e-103 380.6 348 58.3
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 3.2e-103 379.0 345 59.4
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 7.1e-103 377.9 344 58.4
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 4.6e-102 375.2 332 62.0
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 4.6e-102 375.2 332 62.0
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 6.0e-102 374.8 347 58.2
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 7.8e-102 374.4 374 54.8
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 1.1e-100 370.5 344 55.5
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.5e-100 370.2 344 56.7
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 1.2e-99 367.1 329 59.9
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 2.1e-99 366.3 345 56.2
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 3.6e-99 365.5 309 62.1
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 6.2e-99 364.8 373 52.8
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 1.1e-98 364.0 341 58.1
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 4.0e-98 362.1 344 58.4
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 4.0e-98 362.1 304 60.2
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 6.9e-98 361.3 344 57.8
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 6.9e-98 361.3 345 55.9
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.2e-97 360.5 344 57.8
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 2.0e-97 359.8 344 57.0
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 4.4e-97 358.6 345 57.4
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 5.8e-97 358.2 347 56.8
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 1.3e-96 357.1 330 57.3
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 2.2e-96 356.3 345 55.7
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 2.9e-96 355.9 345 55.7
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 3.8e-96 355.5 347 55.0
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 3.8e-96 355.5 345 55.7
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 3.8e-96 355.5 345 55.7
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 4.9e-96 355.1 345 56.2
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 4.9e-96 355.1 332 59.3
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 1.1e-95 354.0 344 55.2
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 4.2e-95 352.1 347 55.6
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 5.4e-95 351.7 347 56.2
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 5.4e-95 351.7 344 56.1
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 9.3e-95 350.9 338 55.0
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 9.3e-95 350.9 348 56.0
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.6e-94 350.1 331 56.2
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 2.7e-94 349.4 345 54.8
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 4.6e-94 348.6 340 55.0
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 1.7e-93 346.7 312 56.1
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 3.0e-93 345.9 334 56.3
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 3.0e-93 345.9 332 57.2
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 1.9e-92 343.2 302 58.9
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 4.8e-91 338.6 347 54.2
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 8.1e-91 337.8 321 56.1
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 2.4e-90 336.3 310 58.7
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 2.4e-90 336.3 335 55.8
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 2.0e-89 333.2 346 52.0
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 3.4e-89 332.4 312 58.0
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 7.6e-89 331.3 320 56.9
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.3e-88 330.5 305 57.7
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 1.3e-88 330.5 378 49.7
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 6.4e-88 328.2 329 56.2
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 6.4e-88 328.2 352 51.7
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 8.4e-88 327.8 346 52.9
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 8.4e-88 327.8 312 57.7
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 1.4e-87 327.0 329 55.9
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 1.9e-87 326.6 309 57.3
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 7.1e-87 324.7 329 55.6
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 7.1e-87 324.7 339 51.6
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 1.6e-86 323.6 348 51.4
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 4.6e-86 322.0 297 59.6
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 1.0e-85 320.9 307 55.4
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 5.1e-85 318.5 291 59.8
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 2.8e-83 312.8 331 48.9
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 3.7e-83 312.4 349 50.4
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 4.8e-83 312.0 277 57.8
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 8.1e-83 311.2 341 50.4
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 3.1e-82 309.3 301 57.5
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 4.0e-82 308.9 325 52.0
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 6.9e-82 308.1 324 54.6
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 6.9e-82 308.1 340 50.6
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 5.8e-81 305.1 311 51.4
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 5.8e-81 305.1 287 59.6
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 9.9e-81 304.3 324 54.0
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 1.3e-80 303.9 326 51.2
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 1.3e-80 303.9 338 49.1
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 2.2e-80 303.1 305 50.8
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 2.2e-80 303.1 346 49.1
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 2.9e-80 302.8 277 57.4
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 3.8e-80 302.4 325 49.5
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 1.1e-79 300.8 346 49.1
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 4.2e-79 298.9 311 50.5
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 7.1e-79 298.1 313 50.5
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 9.3e-79 297.7 313 49.8
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 9.3e-79 297.7 277 54.9
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 3.5e-78 295.8 311 53.1
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 7.9e-78 294.7 314 49.7
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 1.0e-77 294.3 313 50.2
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 1.0e-77 294.3 313 50.2
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 3.9e-77 292.4 338 47.0
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 8.7e-77 291.2 282 55.7
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 1.1e-76 290.8 312 49.7
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 3.3e-76 289.3 314 49.0
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 9.6e-76 287.7 281 54.8
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 3.1e-74 282.7 202 69.3
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 6.9e-74 281.6 317 46.7
TAR381G1258 Trochodendron aralioides HOM05D004652 ORTHO05D005634 4.9e-72 275.4 202 69.3
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 2.7e-70 269.6 346 49.4
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 3.5e-70 269.2 383 43.1
Gohir.D13G040700 Gossypium hirsutum HOM05D004652 ORTHO05D005634 6.3e-67 258.5 203 67.0
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 8.2e-67 258.1 287 51.6
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.4e-66 257.3 282 48.2
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 1.8e-66 256.9 203 64.5
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 1.4e-61 240.7 332 40.4
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 3.0e-61 239.6 306 43.1
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 1.5e-60 237.3 258 48.1
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 1.3e-59 234.2 309 41.7
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 4.1e-58 229.2 324 40.7
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 1.2e-57 227.6 249 49.8
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 6.5e-56 221.9 352 38.9
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 1.1e-55 221.1 309 38.5
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 7.4e-52 208.4 346 37.0
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 9.1e-50 201.4 235 46.0
TAR381G1519 Trochodendron aralioides HOM05D004652 ORTHO05D005634 2.6e-41 173.3 104 77.9
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.7e-32 144.1 162 49.4
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 2.7e-30 136.7 83 75.9
Lalb_Chr09g0323281 Lupinus albus HOM05D004652 ORTHO05D005634 6.1e-30 135.6 121 61.2
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 2.4e-26 123.6 83 69.9
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 1.1e-23 114.8 137 48.9
Cc00_g07740 Coffea canephora HOM05D004652 ORTHO05D005634 7.2e-23 112.1 220 33.6
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 1.0e-21 108.2 83 59.0
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 1.0e-21 108.2 83 59.0
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 4.4e-20 102.8 348 26.4
MCO15G669 Micromonas commoda HOM05D004652 ORTHO05D005634 2.3e-16 90.5 192 28.6
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 2.9e-16 90.1 169 35.5
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 5.2e-13 79.3 78 51.3
MCO09G010 Micromonas commoda HOM05D004652 ORTHO05D005634 3.4e-12 76.6 177 30.5
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 3.2e-10 70.1 163 33.1
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 4.1e-10 69.7 56 67.9
CDE01G0594 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 7.8e-09 65.5 42 66.7


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