Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08961_v3 Cicer arietinum L. HOM05D007410 ORTHO05D009500 5.5e-98 362.8 674 100.0
Psat2g007640 Pisum sativum HOM05D007410 ORTHO05D009500 2.3e-64 251.1 674 89.8
Medtr7g103600 Medicago truncatula HOM05D007410 ORTHO05D009500 5.3e-48 196.8 674 85.6
TPR.G28359 Trifolium pratense HOM05D007410 ORTHO05D009500 5.4e-45 186.8 697 79.2
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 4.8e-41 173.7 666 83.3
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 1.4e-40 172.2 664 85.1
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 3.2e-37 161.0 668 82.9
Glyma.19G190733 Glycine max HOM05D007410 ORTHO05D009500 3.0e-35 154.5 160 86.2
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 2.8e-33 147.9 160 82.5
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 8.1e-33 146.4 161 85.1
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 1.4e-21 109.0 157 70.7
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 3.2e-21 107.8 157 67.5
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 9.3e-21 106.3 157 70.1
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 1.8e-19 102.1 244 70.1
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 6.7e-19 100.1 159 67.3
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 1.5e-18 99.0 161 68.9
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.9e-18 98.6 159 66.7
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 1.9e-18 98.6 159 67.9
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 2.5e-18 98.2 159 66.7
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 3.3e-18 97.8 157 69.4
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 7.4e-18 96.7 157 69.4
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 1.3e-17 95.9 159 66.7
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 2.8e-17 94.7 153 69.9
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 2.8e-17 94.7 157 68.2
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 4.8e-17 94.0 159 66.0
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 4.8e-17 94.0 159 66.0
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 6.3e-17 93.6 153 70.6
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 1.1e-16 92.8 156 65.4
FAN09G0790 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.8e-16 92.0 158 65.8
Sabra10G0194300 Salix brachista HOM05D001909 ORTHO05D007079 3.1e-16 91.3 154 69.5
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 2.0e-15 88.6 163 63.8
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 1.7e-14 85.5 161 64.0
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 1.4e-13 82.4 146 67.1
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 1.6e-12 79.0 158 63.3
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 2.1e-12 78.6 159 59.7
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 6.1e-12 77.0 160 30.0
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 6.1e-12 77.0 149 66.4
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 1.4e-11 75.9 159 63.5
Manes.09G058000 Manihot esculenta HOM05D007410 ORTHO05D009500 3.0e-11 74.7 156 63.5
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 5.1e-11 73.9 155 62.6
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 6.7e-11 73.6 146 67.1
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 1.5e-10 72.4 157 51.6
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 3.3e-10 71.2 157 61.8
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 4.3e-10 70.9 161 55.3
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 9.7e-10 69.7 159 56.0
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 1.3e-09 69.3 157 61.1
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 1.3e-09 69.3 157 61.1
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 2.2e-09 68.6 158 55.1
HanXRQChr17g0535541 Helianthus annuus HOM05D007410 ORTHO05D009500 8.2e-09 66.6 146 29.5
SHI27720 Sapria himalayana HOM05D007410 ORTHO05D009500 6.9e-08 63.5 55 54.5
Cpa.g.sc117.70 Carica papaya HOM05D007410 ORTHO05D009500 9.1e-08 63.2 159 62.9
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 9.1e-08 63.2 154 61.7
Ciclev10033972m.g Citrus clementina HOM05D007410 ORTHO05D009500 1.5e-07 62.4 48 58.3
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 2.6e-07 61.6 63 46.0
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 2.6e-07 61.6 48 56.2
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 4.5e-07 60.8 68 45.6
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 4.5e-07 60.8 48 54.2
HanXRQChr02g0058171 Helianthus annuus HOM05D007410 ORTHO05D009500 5.9e-07 60.5 139 59.0
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 7.7e-07 60.1 73 39.7
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 7.7e-07 60.1 48 50.0
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 7.7e-07 60.1 73 43.8
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 7.7e-07 60.1 75 42.7
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 1.0e-06 59.7 69 46.4
Ah.05g174660 Amaranthus hybridus HOM05D007410 ORTHO05D009500 1.3e-06 59.3 47 46.8
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 1.7e-06 58.9 72 40.3
COL.COLO4_29826 Corchorus olitorius HOM05D007410 ORTHO05D009500 2.9e-06 58.2 55 45.5
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 6.5e-06 57.0 157 54.8
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 6.5e-06 57.0 68 42.6
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 8.5e-06 56.6 159 61.0


User provided reference genes

Program Settings