Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 4.4e-178 627.9 320 100.0
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 9.8e-170 600.1 320 95.6
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 7.3e-141 504.2 320 81.6
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 1.6e-135 486.5 304 82.2
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 4.0e-131 471.9 305 80.7
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 8.4e-121 437.6 332 71.7
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 6.9e-115 417.9 332 69.0
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 3.3e-109 399.1 312 69.2
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 1.1e-107 394.0 333 67.0
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 2.4e-107 392.9 335 66.3
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 4.3e-93 345.5 336 58.9
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 7.4e-93 344.7 332 60.5
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 4.6e-87 325.5 349 55.6
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 5.9e-74 282.0 338 50.0
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 9.7e-69 264.6 363 46.0
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 5.9e-66 255.4 344 46.2
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 1.3e-65 254.2 341 48.7
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 1.3e-65 254.2 317 48.6
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 1.2e-63 247.7 339 46.9
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 2.8e-60 236.5 340 45.3
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 4.1e-59 232.6 324 45.1
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 7.7e-58 228.4 321 44.5
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 3.6e-55 219.5 348 42.5
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 5.4e-51 205.7 335 42.4
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 7.3e-48 195.3 369 38.8
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 1.2e-45 188.0 243 42.8
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 3.2e-43 179.9 338 37.3
TAR633G2803 Trochodendron aralioides HOM05D008196 ORTHO05D010261 2.0e-42 177.2 347 40.1
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 4.6e-42 176.0 351 36.2
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 1.0e-41 174.9 351 36.2
Actinidia31311 Actinidia chinensis HOM05D008196 ORTHO05D010261 4.7e-39 166.0 340 36.8
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 3.1e-38 163.3 242 38.8
COL.COLO4_26896 Corchorus olitorius HOM05D008196 ORTHO05D011585 1.5e-37 161.0 241 40.7
Dinv37347 Davidia involucrata HOM05D008196 ORTHO05D010261 2.0e-37 160.6 307 39.4
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 9.8e-37 158.3 195 46.7
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 9.8e-37 158.3 259 40.2
QL07p041760 Quercus lobata HOM05D008196 ORTHO05D010261 1.1e-35 154.8 159 54.1
RhsimUnG0004600 Rhododendron simsii HOM05D008196 ORTHO05D010261 1.1e-35 154.8 353 35.1
PSO063G4707 Papaver somniferum HOM05D008196 ORTHO05D010261 2.4e-35 153.7 369 33.9
RhsimUnG0068000 Rhododendron simsii HOM05D008196 ORTHO05D010261 7.0e-35 152.1 352 35.5
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 2.7e-34 150.2 327 37.0
vmacro08799 Vaccinium macrocarpon HOM05D008196 ORTHO05D010261 1.1e-30 138.3 336 34.2
PSO339G1434 Papaver somniferum HOM05D008196 ORTHO05D010261 2.3e-25 120.6 300 35.0
QL07p041763 Quercus lobata HOM05D008196 ORTHO05D010261 1.2e-23 114.8 179 39.7
CANSAT80G2595 Cannabis sativa HOM05D008196 ORTHO05D010261 2.4e-22 110.5 322 32.3
Nn3g19096 Nelumbo nucifera HOM05D008196 ORTHO05D010261 2.2e-20 104.0 362 31.2
ClCG10G019830 Citrullus lanatus HOM05D022817 ORTHO05D010261 5.4e-19 99.4 314 33.1
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 9.2e-19 98.6 219 31.5
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 9.2e-19 98.6 219 31.5
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 2.1e-18 97.4 229 33.2
Manes.09G049502 Manihot esculenta HOM05D008196 ORTHO05D010261 1.7e-17 94.4 104 53.8
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 3.0e-17 93.6 199 34.2
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 1.9e-16 90.9 208 32.7
CSS0006202 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 5.6e-16 89.4 64 68.8
HPP92_014786 Vanilla planifolia HOM05D008196 ORTHO05D010261 8.1e-15 85.5 286 31.1
PGR142G2786 Punica granatum HOM05D008196 ORTHO05D010261 2.4e-14 84.0 305 30.2
Mapoly0028s0074 Marchantia polymorpha HOM05D008196 ORTHO05D010261 3.1e-14 83.6 200 32.5
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 2.0e-13 80.9 192 30.7
Sed0000391 Sechium edule HOM05D022817 ORTHO05D010261 4.4e-13 79.7 328 30.8
Sed0013835 Sechium edule HOM05D022817 ORTHO05D010261 3.8e-12 76.6 310 29.4
SEGI_22377 Sequoiadendron giganteum HOM05D008196 ORTHO05D010261 1.1e-11 75.1 117 45.3
MELO3C009385.2 Cucumis melo HOM05D022817 ORTHO05D010261 9.3e-11 72.0 113 44.2
CsaV3_3G036270 Cucumis sativus L. HOM05D022817 ORTHO05D010261 9.3e-11 72.0 113 44.2
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 5.1e-09 66.2 188 24.5
ECA233G4339 Erigeron canadensis HOM05D005316 ORTHO05D006495 8.7e-09 65.5 135 37.8
Cfa021114 Carpinus fangiana HOM05D008196 ORTHO05D010261 1.1e-08 65.1 119 41.2
Aqoxy2G03022 Aquilegia oxysepala HOM05D003060 ORTHO05D001716 1.5e-08 64.7 130 30.8
CSS0016699 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.5e-08 64.7 122 37.7
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 2.5e-08 63.9 107 34.6
Solyc01g067040.2 Solanum lycopersicum HOM05D003060 ORTHO05D001716 7.3e-08 62.4 107 39.3
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 9.6e-08 62.0 210 25.2
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 2.8e-07 60.5 185 27.0
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 3.6e-07 60.1 183 26.2
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 3.6e-07 60.1 186 27.4
Sopen01g028750 Solanum pennellii HOM05D003060 ORTHO05D001716 4.8e-07 59.7 129 36.4
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 6.2e-07 59.3 192 27.1
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 8.1e-07 58.9 196 25.5
unitig_746.g26861 Utricularia gibba HOM05D003060 ORTHO05D001716 1.1e-06 58.5 90 32.2
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 3.1e-06 57.0 210 25.2
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 4.0e-06 56.6 204 27.5
DCAR_027433 Daucus carota HOM05D008196 ORTHO05D010261 5.3e-06 56.2 66 43.9
Eucgr.K02433 Eucalyptus grandis HOM05D008196 ORTHO05D010261 5.3e-06 56.2 79 43.0
RcHm_v2.0_Chr3g0455351 Rosa chinensis HOM05D003060 ORTHO05D001716 5.3e-06 56.2 188 27.1
CAN.G820.4 Capsicum annuum HOM05D003060 ORTHO05D001716 6.9e-06 55.8 137 36.5
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 9.0e-06 55.5 177 26.6
Sc09g0003030 Simmondsia chinensis HOM05D003060 ORTHO05D001716 9.0e-06 55.5 97 34.0


User provided reference genes

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