Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08810_v3 Cicer arietinum L. HOM05D007476 ORTHO05D006998 6.0e-66 254.6 192 100.0
Psat3g047760 Pisum sativum HOM05D007476 ORTHO05D006998 2.9e-36 156.0 192 78.1
TPR.G21469 Trifolium pratense HOM05D007476 ORTHO05D006998 1.6e-34 150.2 203 75.9
Medtr7g100260 Medicago truncatula HOM05D007476 ORTHO05D006998 3.6e-26 122.5 199 70.9
VMungo1383G2744 Vigna mungo HOM05D007476 ORTHO05D006998 1.0e-17 94.4 183 54.6
Glyma.03G176200 Glycine max HOM05D007476 ORTHO05D006998 4.4e-16 89.0 189 50.3
Lj1g0005274 Lotus japonicus HOM05D007476 ORTHO05D006998 4.4e-16 89.0 195 64.1
arahy.Tifrunner.gnm1.ann1.UZX3W4 Arachis hypogaea HOM05D007476 ORTHO05D006998 2.4e-14 83.2 167 59.3
Glyma.19G176700 Glycine max HOM05D007476 ORTHO05D006998 7.0e-14 81.6 202 49.0
Phvul.001G173200 Phaseolus vulgaris HOM05D007476 ORTHO05D006998 7.8e-13 78.2 190 47.4
Cfa017474 Carpinus fangiana HOM05D007476 ORTHO05D006998 1.7e-12 77.0 214 37.9
arahy.Tifrunner.gnm1.ann1.KRM1EW Arachis hypogaea HOM05D007476 ORTHO05D006998 2.3e-12 76.6 168 56.5
Gohir.A13G076000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 6.1e-10 68.6 195 42.1
Gorai.001G248500 Gossypium raimondii HOM05D007476 ORTHO05D006998 3.1e-09 66.2 195 43.1
Duzib093G1301 Durio zibethinus HOM05D007476 ORTHO05D006998 6.8e-09 65.1 189 41.8
MD12G1129600 Malus domestica HOM05D007476 ORTHO05D006998 8.9e-09 64.7 222 41.4
Lalb_Chr20g0113001 Lupinus albus HOM05D007476 ORTHO05D006998 9.8e-08 61.2 185 46.5
Lalb_Chr25g0289331 Lupinus albus HOM05D007476 ORTHO05D006998 1.3e-07 60.8 157 54.1
CANSAT80G1705 Cannabis sativa HOM05D007476 ORTHO05D006998 1.9e-06 57.0 208 41.8
Potri.016G082900 Populus trichocarpa HOM05D007476 ORTHO05D006998 1.9e-06 57.0 210 38.1
RcHm_v2.0_Chr3g0468131 Rosa chinensis HOM05D007476 ORTHO05D006998 1.9e-06 57.0 215 33.5
FvH4_6g14930 Fragaria vesca HOM05D007476 ORTHO05D006998 2.4e-06 56.6 176 55.1
Potri.006G134000 Populus trichocarpa HOM05D007476 ORTHO05D006998 2.4e-06 56.6 156 50.0
FAN02G2102 Fragaria x ananassa HOM05D007476 ORTHO05D006998 5.4e-06 55.5 181 47.5
Gorai.009G421500 Gossypium raimondii HOM05D007476 ORTHO05D006998 7.0e-06 55.1 205 40.0
FAN05G2812 Fragaria x ananassa HOM05D007476 ORTHO05D006998 9.2e-06 54.7 214 48.1


User provided reference genes

Program Settings