Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08771_v3 Cicer arietinum L. HOM05D000222 ORTHO05D148709 6.7e-85 317.4 169 100.0
Ca_11540_v3 Cicer arietinum L. HOM05D000222 ORTHO05D003997 2.2e-19 99.8 267 33.3
Ca_30994_v3 Cicer arietinum L. HOM05D000222 ORTHO05D003997 2.2e-19 99.8 267 33.3
Ca_11453_v3 Cicer arietinum L. HOM05D000666 ORTHO05D001727 2.7e-17 92.8 75 73.3
Ca_09071_v3 Cicer arietinum L. HOM05D000222 ORTHO05D003461 3.3e-15 85.9 144 41.7
Ca_22809_v3 Cicer arietinum L. HOM05D000666 ORTHO05D001727 1.6e-14 83.6 58 81.0
Ca_01723_v3 Cicer arietinum L. HOM05D000263 ORTHO05D000213 2.0e-12 76.6 63 71.4
Ca_28261_v3 Cicer arietinum L. HOM05D000666 ORTHO05D001727 2.2e-11 73.2 58 72.4
Ca_06458_v3 Cicer arietinum L. HOM05D000222 ORTHO05D003997 2.4e-10 69.7 54 68.5
Psat6g070440 Pisum sativum HOM05D000666 ORTHO05D001727 3.2e-10 69.3 79 55.7
Ca_02717_v3 Cicer arietinum L. HOM05D000068 ORTHO05D011548 2.7e-09 66.2 50 70.0
Glyma.02G305700 Glycine max HOM05D000222 ORTHO05D003997 4.6e-09 65.5 50 66.0
Medtr1g066850 Medicago truncatula HOM05D000666 ORTHO05D001727 6.0e-09 65.1 81 53.1
Lalb_Chr04g0247271 Lupinus albus HOM05D000222 ORTHO05D003997 1.0e-08 64.3 54 61.1
Lalb_Chr10g0107621 Lupinus albus HOM05D000222 ORTHO05D003997 1.0e-08 64.3 54 61.1
Glyma.14G007300 Glycine max HOM05D000222 ORTHO05D003997 1.3e-08 63.9 50 64.0
LjContig00081g0010659 Lotus japonicus HOM05D000222 ORTHO05D003997 1.7e-08 63.5 46 69.6
Medtr5g097360 Medicago truncatula HOM05D000222 ORTHO05D003997 1.7e-08 63.5 53 64.2
Lj6g0017172 Lotus japonicus HOM05D000222 ORTHO05D003997 2.3e-08 63.2 78 47.4
Phvul.008G285600 Phaseolus vulgaris HOM05D000222 ORTHO05D003997 6.6e-08 61.6 38 73.7
Glyma.13G025900 Glycine max HOM05D000222 ORTHO05D003997 8.6e-08 61.2 50 64.0
VMungo0540G0259 Vigna mungo HOM05D000222 ORTHO05D003997 1.1e-07 60.8 78 46.2
VMungo0647G0556 Vigna mungo HOM05D000222 ORTHO05D003997 1.1e-07 60.8 38 73.7
Phvul.006G012000 Phaseolus vulgaris HOM05D000222 ORTHO05D003997 1.9e-07 60.1 86 45.3
Dinv05353 Davidia involucrata HOM05D000222 ORTHO05D000329 2.5e-07 59.7 46 63.0
Nn1g03230 Nelumbo nucifera HOM05D000222 ORTHO05D003997 2.5e-07 59.7 54 55.6
Aqoxy4G02226 Aquilegia oxysepala HOM05D000222 ORTHO05D003997 3.3e-07 59.3 50 60.0
Ciclev10014794m.g Citrus clementina HOM05D000222 ORTHO05D003997 3.3e-07 59.3 54 55.6
Haze_12689 Corylus avellana HOM05D000222 ORTHO05D003997 3.3e-07 59.3 46 60.9
Lalb_Chr02g0156341 Lupinus albus HOM05D000666 ORTHO05D001727 3.3e-07 59.3 78 48.7
Glyma.20G059100 Glycine max HOM05D000222 ORTHO05D003997 4.3e-07 58.9 54 57.4
Cfa014242 Carpinus fangiana HOM05D000222 ORTHO05D003997 5.6e-07 58.5 46 58.7
CiPaw.03G278700 Carya illinoinensis HOM05D000222 ORTHO05D003997 5.6e-07 58.5 42 66.7
TWI18G0788 Tripterygium wilfordii HOM05D000222 ORTHO05D003997 5.6e-07 58.5 54 53.7
TWI36G1024 Tripterygium wilfordii HOM05D000222 ORTHO05D003997 5.6e-07 58.5 86 43.0
Cpa.g.sc136.23 Carica papaya HOM05D000222 ORTHO05D003997 7.3e-07 58.2 46 60.9
Glyma.10G049600 Glycine max HOM05D000666 ORTHO05D001727 7.3e-07 58.2 132 37.1
PGR042G0083 Punica granatum HOM05D000222 ORTHO05D003997 9.5e-07 57.8 54 51.9
TPR.G1263 Trifolium pratense HOM05D000222 ORTHO05D003997 9.5e-07 57.8 45 66.7
CiPaw.04G196200 Carya illinoinensis HOM05D000222 ORTHO05D003997 1.2e-06 57.4 50 56.0
Eucgr.A01043 Eucalyptus grandis HOM05D000222 ORTHO05D003997 1.2e-06 57.4 54 53.7
Gohir.A07G190500 Gossypium hirsutum HOM05D000222 ORTHO05D003997 1.2e-06 57.4 54 51.9
Gohir.D07G196800 Gossypium hirsutum HOM05D000222 ORTHO05D003997 1.2e-06 57.4 54 51.9
Gorai.001G099400 Gossypium raimondii HOM05D000222 ORTHO05D003997 1.2e-06 57.4 54 53.7
Gorai.001G220500 Gossypium raimondii HOM05D000222 ORTHO05D003997 1.2e-06 57.4 54 51.9
Prupe.3G201500 Prunus persica HOM05D000222 ORTHO05D003997 1.6e-06 57.0 54 53.7
Prupe.6G241200 Prunus persica HOM05D000666 ORTHO05D001727 1.6e-06 57.0 69 52.2
TAR629G0719 Trochodendron aralioides HOM05D000222 ORTHO05D003997 1.6e-06 57.0 46 60.9
Gohir.D07G092800 Gossypium hirsutum HOM05D000222 ORTHO05D003997 2.1e-06 56.6 54 53.7
MBI19_g25587_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D003997 3.6e-06 55.8 54 50.0
FAN14G3541 Fragaria x ananassa HOM05D000222 ORTHO05D003997 4.7e-06 55.5 50 56.0
Manes.13G063900 Manihot esculenta HOM05D000222 ORTHO05D003997 4.7e-06 55.5 54 51.9
Sabra02G0169300 Salix brachista HOM05D000222 ORTHO05D003997 4.7e-06 55.5 131 33.6
Thecc.01G190800 Theobroma cacao HOM05D000222 ORTHO05D003997 4.7e-06 55.5 46 56.5
CSS0026317 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D003997 6.2e-06 55.1 54 53.7
Carub.0002s0065 Capsella rubella HOM05D000222 ORTHO05D003997 6.2e-06 55.1 84 36.9
Potri.014G164800 Populus trichocarpa HOM05D000222 ORTHO05D003997 6.2e-06 55.1 54 48.1
EL10Ac9g22704 Beta vulgaris HOM05D000222 ORTHO05D003997 8.1e-06 54.7 54 50.0
Glyma.03G178100 Glycine max HOM05D000666 ORTHO05D001727 8.1e-06 54.7 77 45.5
Gohir.A07G087900 Gossypium hirsutum HOM05D000222 ORTHO05D003997 8.1e-06 54.7 54 51.9


User provided reference genes

Program Settings