Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 0.0e+00 1220.7 617 100.0
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 1.3e-274 949.5 615 80.3
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 4.0e-260 901.4 611 76.8
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 7.2e-254 880.6 611 74.5
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 1.6e-245 852.8 619 73.3
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 3.9e-239 831.6 612 71.1
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 7.3e-238 827.4 611 70.5
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 9.2e-233 810.4 610 69.7
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 4.3e-222 775.0 604 65.2
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 1.2e-221 773.5 604 65.1
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 2.2e-194 682.9 610 60.2
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 1.4e-188 663.7 609 58.0
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 3.1e-180 636.0 610 54.8
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 3.4e-179 632.5 610 54.6
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 1.3e-175 620.5 610 53.8
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 1.1e-172 610.9 610 54.1
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 2.2e-170 603.2 521 60.8
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 6.5e-170 601.7 612 54.6
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 1.4e-169 600.5 608 53.0
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 7.2e-169 598.2 610 53.1
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 1.8e-167 593.6 689 51.2
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 7.4e-166 588.2 630 51.6
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 9.7e-166 587.8 610 52.6
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 5.3e-164 582.0 613 51.7
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 2.2e-162 576.6 610 52.8
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 2.2e-162 576.6 617 52.5
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 3.8e-162 575.9 611 52.0
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 2.1e-160 570.1 613 51.7
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 2.0e-158 563.5 610 51.5
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 6.3e-157 558.5 614 50.5
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 1.5e-155 553.9 609 49.6
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 2.6e-155 553.1 577 52.7
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 2.6e-155 553.1 572 52.8
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 1.2e-152 544.3 655 47.8
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 1.4e-151 540.8 611 48.9
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 3.9e-151 539.3 632 48.4
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 5.7e-150 535.4 609 49.4
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 5.7e-150 535.4 609 49.4
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 7.4e-150 535.0 614 49.8
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 7.4e-150 535.0 628 47.8
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 1.7e-149 533.9 609 49.3
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 6.3e-149 531.9 609 47.6
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 1.7e-146 523.9 620 47.4
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 4.7e-144 515.8 612 48.7
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 4.7e-144 515.8 613 49.4
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 2.3e-143 513.5 611 48.6
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 6.8e-143 511.9 612 47.9
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 1.5e-142 510.8 629 45.0
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 2.6e-142 510.0 613 48.1
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 6.3e-141 505.4 624 46.2
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 1.8e-140 503.8 615 48.3
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 5.4e-140 502.3 612 47.2
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 3.5e-139 499.6 481 57.6
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 6.1e-136 488.8 627 45.3
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 5.2e-135 485.7 626 45.2
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 1.5e-134 484.2 626 47.1
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 1.5e-134 484.2 364 69.2
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 3.1e-132 476.5 630 46.2
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 1.2e-131 474.6 625 45.3
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 1.6e-131 474.2 641 42.9
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 5.0e-130 469.2 628 44.3
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 2.5e-129 466.8 629 45.9
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 3.3e-129 466.5 626 44.6
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 7.2e-129 465.3 624 43.1
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 1.2e-128 464.5 629 45.8
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 1.6e-128 464.2 662 44.7
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 4.7e-128 462.6 611 44.2
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 4.7e-128 462.6 723 40.8
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 1.0e-127 461.5 642 44.2
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 1.5e-126 457.6 648 43.8
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 1.3e-125 454.5 632 45.1
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 4.9e-125 452.6 623 43.5
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 8.3e-125 451.8 632 44.9
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 3.2e-124 449.9 641 44.0
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 4.0e-119 433.0 318 71.1
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 2.3e-111 407.1 483 48.9
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 3.9e-106 389.8 483 48.2
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 1.6e-104 384.4 621 40.6
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 4.7e-104 382.9 395 54.2
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 6.2e-104 382.5 655 38.5
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 4.4e-102 376.3 394 54.6
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 1.7e-101 374.4 482 45.4
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 1.2e-91 341.7 224 76.3
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 1.2e-86 325.1 329 55.0
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 1.3e-85 321.6 278 59.4
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 5.4e-84 316.2 316 54.7
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 2.1e-83 314.3 408 44.9
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 1.5e-81 308.1 232 66.4
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 6.0e-75 286.2 277 56.3
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 5.3e-71 273.1 296 49.3
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 1.3e-61 241.9 276 50.7
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 7.7e-54 216.1 632 29.0
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 2.9e-53 214.2 323 40.6
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 3.2e-52 210.7 224 50.0
Psat1g093320 Pisum sativum HOM05D006061 ORTHO05D007450 1.8e-47 194.9 131 67.9
Psat0ss8385g0040 Pisum sativum HOM05D006061 ORTHO05D007450 1.5e-46 191.8 125 69.6
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 1.1e-44 185.7 617 27.9
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 3.2e-44 184.1 179 60.3
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 1.3e-40 172.2 266 40.6
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 1.2e-38 165.6 266 41.4
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 3.8e-37 160.6 418 32.1
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 3.7e-32 144.1 293 32.4
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 3.5e-30 137.5 151 52.3
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 5.5e-28 130.2 610 25.1
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 1.5e-25 122.1 149 44.3
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 2.6e-25 121.3 238 37.0
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 9.8e-25 119.4 368 29.1
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 1.8e-23 115.2 168 39.3
Gohir.D10G064900 Gossypium hirsutum HOM05D006061 ORTHO05D007450 7.7e-22 109.8 124 44.4
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 1.3e-21 109.0 121 43.8
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 3.8e-21 107.5 122 50.8
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 1.5e-20 105.5 162 37.7
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 2.5e-20 104.8 117 48.7
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 5.5e-20 103.6 148 42.6
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 5.2e-18 97.1 101 48.5
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 8.3e-16 89.7 197 33.0
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 1.7e-13 82.0 113 40.7
PSO541G3330 Papaver somniferum HOM05D006061 ORTHO05D007450 8.6e-13 79.7 501 23.0
Psat0s5291g0040 Pisum sativum HOM05D006061 ORTHO05D007450 6.8e-10 70.1 71 54.9
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 1.5e-09 68.9 88 44.3
RcHm_v2.0_Chr3g0485191 Rosa chinensis HOM05D006061 ORTHO05D007450 4.9e-08 63.9 56 55.4
Psat2g031160 Pisum sativum HOM05D006061 ORTHO05D007450 1.1e-07 62.8 96 40.6
RcHm_v2.0_Chr6g0254781 Rosa chinensis HOM05D006061 ORTHO05D007450 2.4e-07 61.6 55 54.5


User provided reference genes

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