Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08743_v3 Cicer arietinum L. HOM05D007042 ORTHO05D008441 2.4e-102 375.6 197 100.0
Psat3g054000 Pisum sativum HOM05D007042 ORTHO05D008441 5.4e-86 321.2 198 83.3
Medtr7g098470 Medicago truncatula HOM05D007042 ORTHO05D008441 3.3e-83 312.0 196 82.7
Glyma.19G168400 Glycine max HOM05D007042 ORTHO05D008441 1.4e-81 306.6 196 79.6
VMungo1383G0900 Vigna mungo HOM05D007042 ORTHO05D008441 1.2e-80 303.5 196 77.6
Glyma.03G167300 Glycine max HOM05D007042 ORTHO05D008441 9.9e-80 300.4 196 79.1
Phvul.001G164800 Phaseolus vulgaris HOM05D007042 ORTHO05D008441 8.3e-79 297.4 196 76.0
arahy.Tifrunner.gnm1.ann1.T4WIMW Arachis hypogaea HOM05D007042 ORTHO05D008441 1.9e-78 296.2 198 74.2
arahy.Tifrunner.gnm1.ann1.UI445S Arachis hypogaea HOM05D007042 ORTHO05D008441 1.9e-78 296.2 195 75.4
Lj1g0019034 Lotus japonicus HOM05D007042 ORTHO05D008441 2.7e-77 292.4 196 73.5
Lalb_Chr20g0113621 Lupinus albus HOM05D007042 ORTHO05D008441 2.1e-69 266.2 196 70.4
Atru.chr5.1857 Acer truncatum HOM05D007042 ORTHO05D008441 2.7e-69 265.8 191 72.3
Thecc.01G250400 Theobroma cacao HOM05D007042 ORTHO05D008441 1.0e-68 263.8 187 71.1
TWI18G1052 Tripterygium wilfordii HOM05D007042 ORTHO05D008441 2.1e-66 256.1 178 71.9
Dinv16402 Davidia involucrata HOM05D007042 ORTHO05D008441 8.1e-66 254.2 174 72.4
Duzib133G0775 Durio zibethinus HOM05D007042 ORTHO05D008441 4.0e-65 251.9 175 72.0
Gorai.001G181700 Gossypium raimondii HOM05D007042 ORTHO05D008441 5.3e-65 251.5 191 66.5
CiPaw.03G270900 Carya illinoinensis HOM05D007042 ORTHO05D008441 6.9e-65 251.1 186 66.1
Potri.002G256700 Populus trichocarpa HOM05D007042 ORTHO05D008441 9.0e-65 250.8 190 66.8
Gohir.A07G152300 Gossypium hirsutum HOM05D007042 ORTHO05D008441 1.2e-64 250.4 191 66.0
Ciclev10022455m.g Citrus clementina HOM05D007042 ORTHO05D008441 2.6e-64 249.2 172 71.5
Gohir.D07G158500 Gossypium hirsutum HOM05D007042 ORTHO05D008441 7.6e-64 247.7 191 65.4
Dinv43069 Davidia involucrata HOM05D007042 ORTHO05D008441 9.9e-64 247.3 181 69.6
Manes.12G044501 Manihot esculenta HOM05D007042 ORTHO05D008441 9.9e-64 247.3 190 65.8
GSVIVG01028431001 Vitis vinifera HOM05D007042 ORTHO05D008441 2.9e-63 245.7 170 70.6
Hma1.2p1_2139F.1_g314960 Hydrangea macrophylla HOM05D007042 ORTHO05D008441 1.4e-62 243.4 171 69.0
Sed0010391 Sechium edule HOM05D007042 ORTHO05D008441 1.9e-62 243.0 171 69.0
CSS0015019 Camellia sinensis var. sinensis HOM05D007042 ORTHO05D008441 3.2e-62 242.3 175 70.3
Cpa.g.sc87.28 Carica papaya HOM05D007042 ORTHO05D008441 1.6e-61 240.0 171 70.8
CsaV3_6G007350 Cucumis sativus L. HOM05D007042 ORTHO05D008441 1.6e-61 240.0 179 68.2
CiPaw.04G190700 Carya illinoinensis HOM05D007042 ORTHO05D008441 1.0e-60 237.3 191 62.8
Prupe.8G215500 Prunus persica HOM05D007042 ORTHO05D008441 1.3e-60 236.9 191 64.9
Haze_24706 Corylus avellana HOM05D007042 ORTHO05D008441 1.7e-60 236.5 190 62.1
MELO3C022392.2 Cucumis melo HOM05D007042 ORTHO05D008441 2.3e-60 236.1 179 67.0
Nn1g02976 Nelumbo nucifera HOM05D007042 ORTHO05D008441 3.9e-60 235.3 172 65.7
Solyc04g011530.3 Solanum lycopersicum HOM05D007042 ORTHO05D008441 1.5e-59 233.4 172 68.6
TAR633G0993 Trochodendron aralioides HOM05D007042 ORTHO05D008441 1.5e-59 233.4 197 60.4
vmacro14796 Vaccinium macrocarpon HOM05D007042 ORTHO05D008441 1.9e-59 233.0 195 60.0
Cc02_g07760 Coffea canephora HOM05D007042 ORTHO05D008441 4.3e-59 231.9 183 64.5
MD05G1188900 Malus domestica HOM05D007042 ORTHO05D008441 4.3e-59 231.9 177 65.5
MD10G1176500 Malus domestica HOM05D007042 ORTHO05D008441 4.3e-59 231.9 178 65.7
Lj1A74G98 Lonicera japonica HOM05D007042 ORTHO05D008441 1.3e-58 230.3 197 59.4
Sopen04g005710 Solanum pennellii HOM05D007042 ORTHO05D008441 2.1e-58 229.6 172 67.4
TPR.G20062 Trifolium pratense HOM05D007042 ORTHO05D008441 3.6e-58 228.8 127 91.3
Eucgr.H04779 Eucalyptus grandis HOM05D007042 ORTHO05D008441 4.8e-58 228.4 171 67.3
CAN.G786.8 Capsicum annuum HOM05D007042 ORTHO05D008441 6.2e-58 228.0 172 66.3
AUR62025440 Chenopodium quinoa HOM05D007042 ORTHO05D008441 6.2e-58 228.0 174 62.6
RcHm_v2.0_Chr6g0286631 Rosa chinensis HOM05D007042 ORTHO05D008441 8.1e-58 227.6 177 62.1
HanXRQChr15g0468211 Helianthus annuus HOM05D007042 ORTHO05D008441 1.8e-57 226.5 178 61.8
PGSC0003DMG400027743 Solanum tuberosum HOM05D007042 ORTHO05D008441 1.8e-57 226.5 172 67.4
EL10Ac7g17687 Beta vulgaris HOM05D007042 ORTHO05D008441 3.1e-57 225.7 174 61.5
Lsat_1_v5_gn_9_11480 Lactuca sativa HOM05D007042 ORTHO05D008441 3.1e-57 225.7 178 65.2
Nitab4.5_0010166g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 4.0e-57 225.3 172 65.1
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 5.3e-57 224.9 174 65.5
FvH4_2g20510 Fragaria vesca HOM05D007042 ORTHO05D008441 9.0e-57 224.2 177 61.0
Cfa002484 Carpinus fangiana HOM05D007042 ORTHO05D008441 2.0e-56 223.0 164 66.5
Actinidia09516 Actinidia chinensis HOM05D007042 ORTHO05D008441 3.4e-56 222.2 172 66.9
Aqoxy5G00144 Aquilegia oxysepala HOM05D007042 ORTHO05D008441 5.8e-56 221.5 174 62.1
Nitab4.5_0013552g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 9.9e-56 220.7 172 65.1
ECA247G0849 Erigeron canadensis HOM05D007042 ORTHO05D008441 1.7e-55 219.9 176 61.9
Hund05486 Selenicereus undatus HOM05D000914 ORTHO05D000718 1.7e-55 219.9 153 68.6
THA.LOC104814528 Tarenaya hassleriana HOM05D007042 ORTHO05D008441 3.8e-55 218.8 176 64.8
FAN15G2210 Fragaria x ananassa HOM05D007042 ORTHO05D008441 4.9e-55 218.4 158 63.3
FAN24G0975 Fragaria x ananassa HOM05D003075 ORTHO05D003430 4.9e-55 218.4 158 63.3
Rhsim01G0260600 Rhododendron simsii HOM05D007042 ORTHO05D008441 4.9e-55 218.4 152 67.8
Sp3g33630 Schrenkiella parvula HOM05D007042 ORTHO05D008441 4.9e-55 218.4 194 60.3
AUR62008799 Chenopodium quinoa HOM05D007042 ORTHO05D008441 1.1e-54 217.2 154 64.9
Migut.F00782 Erythranthe guttata HOM05D007042 ORTHO05D008441 1.4e-54 216.9 195 56.4
PGR031G2106 Punica granatum HOM05D007042 ORTHO05D008441 1.9e-54 216.5 178 61.8
Aa31LG8G17370 Aethionema arabicum HOM05D007042 ORTHO05D008441 2.4e-54 216.1 173 62.4
Sc17g0002810 Simmondsia chinensis HOM05D007042 ORTHO05D008441 5.4e-54 214.9 149 68.5
ClCG06G001410 Citrullus lanatus HOM05D007042 ORTHO05D008441 7.1e-54 214.5 146 73.3
AL3G53360 Arabidopsis lyrata HOM05D007042 ORTHO05D008441 1.2e-53 213.8 172 64.5
CARHR110910 Cardamine hirsuta HOM05D007042 ORTHO05D008441 1.2e-53 213.8 188 59.6
SalBow3G0444 Salvia bowleyana HOM05D007042 ORTHO05D008441 1.2e-53 213.8 164 64.6
Thhalv10002102m.g Eutrema salsugineum HOM05D007042 ORTHO05D008441 4.6e-53 211.8 172 63.4
Carub.0003s3477 Capsella rubella HOM05D007042 ORTHO05D008441 6.0e-53 211.5 171 63.2
SGA_v2.0_scaffold94G28473 Striga asiatica HOM05D007042 ORTHO05D008441 6.0e-53 211.5 171 62.0
AT2G20390 Arabidopsis thaliana HOM05D007042 ORTHO05D008441 1.8e-52 209.9 172 61.6
FAN27G0500 Fragaria x ananassa HOM05D007042 ORTHO05D008441 2.3e-52 209.5 143 67.1
BcaB03g16831 Brassica carinata HOM05D007042 ORTHO05D008441 8.7e-52 207.6 174 62.1
Peaxi162Scf00760g00324 Petunia axillaris HOM05D007042 ORTHO05D008441 8.7e-52 207.6 134 73.1
QL09p041460 Quercus lobata HOM05D007042 ORTHO05D008441 3.3e-51 205.7 290 44.1
A07p00340 Brassica napus HOM05D007042 ORTHO05D008441 9.6e-51 204.1 156 64.7
BcaC06g36726 Brassica carinata HOM05D007042 ORTHO05D008441 1.3e-50 203.8 174 60.3
C07p00700 Brassica napus HOM05D007042 ORTHO05D008441 1.3e-50 203.8 174 60.3
BolC7t40512H Brassica oleracea HOM05D007042 ORTHO05D008441 1.3e-50 203.8 174 60.3
BraA07t27825Z Brassica rapa HOM05D007042 ORTHO05D008441 1.3e-50 203.8 140 70.0
ATR0787G115 Amborella trichopoda HOM05D007042 ORTHO05D008441 1.4e-49 200.3 169 59.8
SHI26738 Sapria himalayana HOM05D007042 ORTHO05D008441 1.4e-49 200.3 139 67.6
CDE06G0115 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 9.0e-49 197.6 139 64.7
Actinidia27524 Actinidia chinensis HOM05D007042 ORTHO05D008441 1.3e-47 193.7 182 58.8
PSO063G2627 Papaver somniferum HOM05D007042 ORTHO05D008441 2.5e-46 189.5 191 53.4
Sabra02G0195200 Salix brachista HOM05D007042 ORTHO05D008441 2.7e-45 186.0 127 72.4
PSO170G0149 Papaver somniferum HOM05D007042 ORTHO05D008441 4.6e-45 185.3 160 57.5
HPP92_014817 Vanilla planifolia HOM05D007042 ORTHO05D008441 7.9e-45 184.5 139 59.7
Actinidia23697 Actinidia chinensis HOM05D007042 ORTHO05D008441 7.4e-43 177.9 175 57.7
COL.COLO4_03573 Corchorus olitorius HOM05D007042 ORTHO05D008441 2.8e-42 176.0 107 82.2
SEGI_30132 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 3.0e-36 156.0 149 48.3
Zm00001eb088930 Zea mays HOM05D007042 ORTHO05D008441 1.1e-35 154.1 154 46.8
FAN27G0749 Fragaria x ananassa HOM05D003075 ORTHO05D003430 1.5e-35 153.7 111 64.9
Zm00001eb307520 Zea mays HOM05D007042 ORTHO05D008441 5.7e-35 151.8 146 48.6
CDE04G2760 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 7.7e-32 141.4 92 71.7
Os02g0754800 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 1.0e-31 141.0 118 58.5
SHI06358 Sapria himalayana HOM05D007042 ORTHO05D008441 8.5e-31 137.9 108 59.3
TPR.G20307 Trifolium pratense HOM05D007042 ORTHO05D008441 1.4e-30 137.1 86 79.1
Os04g0129600 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 3.2e-30 136.0 106 53.8
AagrBONN_evm.TU.Sc2ySwM_228.1144 Anthoceros agrestis HOM05D007042 ORTHO05D008441 9.1e-25 117.9 139 47.5
SEGI_30900 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 2.3e-20 103.2 96 46.9
Mapoly0078s0039 Marchantia polymorpha HOM05D007042 ORTHO05D008441 2.8e-18 96.3 159 40.3
SMO116G0088 Selaginella moellendorffii HOM05D001526 ORTHO05D008441 1.1e-17 94.4 126 43.7
Pp3c18_10950 Physcomitrium patens HOM05D007042 ORTHO05D008441 4.2e-14 82.4 138 35.5
Potri.014G193150 Populus trichocarpa HOM05D007042 ORTHO05D008441 5.2e-12 75.5 64 60.9
EL10As2g23173 Beta vulgaris HOM05D007042 ORTHO05D008441 3.5e-08 62.8 49 53.1
MCO16G209 Micromonas commoda HOM05D007042 ORTHO05D008441 1.9e-06 57.0 184 27.7
Ah.02g120930 Amaranthus hybridus HOM05D055707 ORTHO05D008441 4.2e-06 55.8 59 47.5


User provided reference genes

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