Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 3.0e-99 365.2 183 100.0
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 3.1e-96 355.1 183 97.8
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 4.0e-91 338.2 183 93.4
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 2.0e-63 246.1 192 72.9
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 2.0e-50 203.0 189 63.5
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 2.6e-50 202.6 191 61.8
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 9.2e-48 194.1 190 62.6
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 9.2e-48 194.1 189 61.9
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 2.7e-47 192.6 192 60.9
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 3.1e-43 179.1 191 57.6
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 1.4e-32 143.7 198 47.5
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 1.8e-30 136.7 189 51.3
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 6.9e-27 124.8 191 43.5
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 1.9e-24 116.7 197 41.1
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 3.2e-24 115.9 185 43.2
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 3.2e-24 115.9 191 41.4
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 9.3e-24 114.4 194 41.2
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 1.6e-23 113.6 199 41.2
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 4.6e-23 112.1 199 40.2
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 7.9e-23 111.3 185 42.2
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 7.9e-23 111.3 199 40.7
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 1.3e-22 110.5 202 39.6
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 5.1e-22 108.6 193 43.5
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 5.1e-22 108.6 193 43.5
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 1.5e-21 107.1 198 40.9
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 1.9e-21 106.7 192 40.6
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 2.5e-21 106.3 199 40.2
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 5.6e-21 105.1 186 38.7
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 7.4e-21 104.8 193 42.5
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 6.2e-20 101.7 199 39.7
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 1.8e-19 100.1 183 40.4
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 3.1e-19 99.4 198 39.9
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 4.0e-19 99.0 197 37.6
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 9.0e-19 97.8 183 39.9
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 1.5e-18 97.1 189 39.2
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 3.4e-18 95.9 196 40.3
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 3.4e-18 95.9 194 39.7
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.0e-17 94.4 202 37.6
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 1.7e-17 93.6 182 36.8
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 3.8e-17 92.4 214 37.9
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 8.4e-17 91.3 208 36.5
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 1.2e-15 87.4 192 38.0
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.6e-15 87.0 193 37.3
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.0e-14 84.3 182 37.9
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 3.9e-14 82.4 189 38.6
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 8.7e-14 81.3 198 34.8
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 1.9e-13 80.1 187 34.8
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 2.5e-13 79.7 201 34.3
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 1.6e-12 77.0 140 37.1
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 1.4e-11 73.9 184 34.8
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 6.9e-11 71.6 117 42.7
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 6.9e-11 71.6 191 33.5
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 9.0e-11 71.2 183 32.8
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 9.0e-11 71.2 186 33.9
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 9.0e-11 71.2 196 31.6
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 1.2e-10 70.9 189 28.6
Lsat_1_v5_gn_8_93101 Lactuca sativa HOM05D008367 ORTHO05D010529 1.5e-10 70.5 169 34.3
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 1.7e-09 67.0 201 30.3
THA.LOC104814518 Tarenaya hassleriana HOM05D013395 ORTHO05D015261 1.7e-09 67.0 178 35.4
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 3.8e-09 65.9 185 33.0
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 5.0e-09 65.5 180 32.2
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 1.9e-08 63.5 52 63.5
Gorai.007G146300 Gossypium raimondii HOM05D008367 ORTHO05D010529 4.2e-08 62.4 189 36.0
Gohir.D11G136600 Gossypium hirsutum HOM05D008367 ORTHO05D010529 5.5e-08 62.0 184 31.5
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 9.4e-08 61.2 194 29.9
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 1.6e-07 60.5 194 29.9
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 2.1e-07 60.1 196 27.0
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 2.1e-07 60.1 203 31.0
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 2.7e-07 59.7 185 30.3
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 3.6e-07 59.3 213 30.5
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 3.6e-07 59.3 187 28.9
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 1.0e-06 57.8 207 29.0
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 1.0e-06 57.8 214 29.4
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 1.4e-06 57.4 184 29.9
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 1.8e-06 57.0 190 28.4
Ah.04g155760 Amaranthus hybridus HOM05D007526 ORTHO05D009350 2.3e-06 56.6 189 28.6
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 2.3e-06 56.6 202 26.7
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 3.0e-06 56.2 173 28.3
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 3.0e-06 56.2 184 29.9
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 3.0e-06 56.2 235 29.8
ECA236G2746 Erigeron canadensis HOM05D008367 ORTHO05D010529 5.1e-06 55.5 173 28.3
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 8.8e-06 54.7 192 26.0


User provided reference genes

Program Settings