Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 2.4e-96 355.5 183 100.0
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 6.8e-75 284.3 182 79.1
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 2.9e-73 278.9 185 79.5
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 8.0e-68 260.8 182 75.8
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 1.3e-65 253.4 183 75.4
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 7.0e-64 247.7 165 78.2
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 2.7e-63 245.7 186 71.0
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 1.6e-60 236.5 165 75.8
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 4.7e-60 235.0 186 69.9
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 8.1e-60 234.2 187 70.6
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 2.3e-59 232.6 182 69.8
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 1.1e-56 223.8 147 75.5
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 1.4e-56 223.4 144 75.0
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 9.2e-56 220.7 140 77.9
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 2.7e-55 219.2 147 73.5
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 4.6e-55 218.4 140 75.7
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 2.3e-54 216.1 139 74.8
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 3.0e-54 215.7 136 78.7
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 5.1e-54 214.9 138 76.8
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 6.6e-54 214.5 133 78.2
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 1.1e-53 213.8 167 65.9
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 1.5e-53 213.4 140 74.3
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 2.5e-53 212.6 146 73.3
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 4.3e-53 211.8 136 76.5
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 7.3e-53 211.1 170 64.7
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 7.3e-53 211.1 170 65.3
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 7.3e-53 211.1 137 73.7
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.8e-52 209.1 134 79.1
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.8e-52 209.1 134 79.1
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 3.6e-52 208.8 190 59.5
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 8.1e-52 207.6 150 68.7
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 2.4e-51 206.1 139 74.1
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 3.1e-51 205.7 134 73.1
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 4.0e-51 205.3 141 71.6
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 4.0e-51 205.3 134 75.4
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 5.2e-51 204.9 141 70.9
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 1.5e-50 203.4 134 74.6
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 1.5e-50 203.4 134 72.4
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 1.5e-50 203.4 145 69.7
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 3.4e-50 202.2 145 68.3
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 3.4e-50 202.2 139 71.9
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 9.9e-50 200.7 176 58.5
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 1.7e-49 199.9 129 74.4
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.7e-49 199.9 137 72.3
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 1.7e-49 199.9 159 67.3
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 3.8e-49 198.7 137 72.3
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.8e-49 198.7 137 72.3
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.8e-49 198.7 137 72.3
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.8e-49 198.7 137 72.3
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.8e-49 198.7 137 72.3
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 4.9e-49 198.4 142 69.0
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 2.4e-48 196.1 143 67.8
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 2.4e-48 196.1 145 66.2
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 5.4e-48 194.9 122 78.7
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 7.1e-48 194.5 176 59.7
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 1.2e-47 193.7 144 66.7
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 1.2e-47 193.7 187 56.1
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 1.2e-47 193.7 187 56.1
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 1.2e-47 193.7 145 66.9
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 1.2e-47 193.7 139 67.6
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.6e-47 193.4 119 79.8
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 2.1e-47 193.0 172 60.5
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.1e-47 193.0 119 79.0
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 4.6e-47 191.8 132 70.5
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 1.3e-46 190.3 136 69.1
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 2.3e-46 189.5 186 57.0
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 2.3e-46 189.5 140 67.9
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 3.0e-46 189.1 137 69.3
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 3.0e-46 189.1 132 69.7
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 3.0e-46 189.1 137 69.3
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 5.1e-46 188.3 121 75.2
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 5.1e-46 188.3 118 79.7
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 6.6e-46 188.0 134 69.4
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 6.6e-46 188.0 137 68.6
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 6.6e-46 188.0 137 69.3
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 6.6e-46 188.0 137 69.3
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 8.7e-46 187.6 154 64.9
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 8.7e-46 187.6 136 68.4
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 1.1e-45 187.2 132 71.2
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 1.1e-45 187.2 138 68.8
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 1.9e-45 186.4 137 68.6
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 2.5e-45 186.0 138 68.1
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 2.5e-45 186.0 138 68.1
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 2.5e-45 186.0 181 56.4
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 7.3e-45 184.5 138 65.2
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 9.6e-45 184.1 132 68.2
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 2.1e-44 183.0 129 76.7
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 2.1e-44 183.0 128 71.1
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 2.1e-44 183.0 117 73.5
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 2.8e-44 182.6 141 68.1
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 6.2e-44 181.4 176 55.7
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 1.1e-43 180.6 139 64.7
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 1.4e-43 180.3 127 74.8
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 1.8e-43 179.9 126 74.6
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 5.2e-43 178.3 121 71.9
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 5.2e-43 178.3 121 71.9
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 3.4e-42 175.6 121 69.4
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 4.4e-42 175.3 138 67.4
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.8e-41 172.2 126 69.8
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 4.9e-41 171.8 118 74.6
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 1.1e-40 170.6 117 73.5
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 5.4e-40 168.3 113 73.5
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 1.2e-39 167.2 131 64.9
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 2.1e-39 166.4 137 60.6
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 3.5e-39 165.6 140 61.4
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 5.6e-37 158.3 115 67.8
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.4e-35 153.7 113 68.1
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 6.9e-35 151.4 134 59.0
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 1.5e-34 150.2 119 65.5
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 1.5e-34 150.2 88 80.7
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 9.9e-34 147.5 97 75.3
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 1.3e-33 147.1 109 67.0
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.9e-32 143.3 99 73.7
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 2.1e-31 139.8 111 59.5
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 1.0e-30 137.5 125 52.8
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 1.8e-30 136.7 109 58.7
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 4.3e-29 132.1 186 40.9
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 1.8e-27 126.7 124 46.8
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 7.6e-18 94.7 120 50.0
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 7.6e-18 94.7 120 40.8
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 5.5e-16 88.6 100 48.0
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.7e-15 86.3 51 82.4
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.5e-10 70.5 61 59.0
Manes.01G158400 Manihot esculenta HOM05D006312 ORTHO05D007843 3.9e-06 55.8 65 52.3


User provided reference genes

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