Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08608_v3 Cicer arietinum L. HOM05D004399 ORTHO05D005303 6.5e-165 583.9 287 100.0
Ca_25695_v3 Cicer arietinum L. HOM05D004399 ORTHO05D005303 3.9e-125 451.8 220 98.6
Psat3g063920 Pisum sativum HOM05D004399 ORTHO05D005303 1.5e-121 439.9 222 95.0
Medtr4g094990 Medicago truncatula HOM05D004399 ORTHO05D005303 2.9e-120 435.6 222 92.8
Medtr7g095060 Medicago truncatula HOM05D004399 ORTHO05D005303 2.1e-118 429.5 222 91.4
Lj1g0019699 Lotus japonicus HOM05D004399 ORTHO05D005303 2.7e-118 429.1 223 91.0
Medtr4g094998 Medicago truncatula HOM05D004399 ORTHO05D005303 1.3e-117 426.8 222 90.5
Lalb_Chr17g0341271 Lupinus albus HOM05D004399 ORTHO05D005303 1.5e-116 423.3 221 91.4
Phvul.010G102900 Phaseolus vulgaris HOM05D004399 ORTHO05D005303 1.9e-116 422.9 219 90.4
VMungo0331G0538 Vigna mungo HOM05D004399 ORTHO05D005303 9.5e-116 420.6 219 90.0
COL.COLO4_27864 Corchorus olitorius HOM05D004399 ORTHO05D005303 1.1e-114 417.2 219 89.5
arahy.Tifrunner.gnm1.ann1.MJW4NY Arachis hypogaea HOM05D004399 ORTHO05D005303 2.3e-114 416.0 232 84.1
FAN22G0874 Fragaria x ananassa HOM05D004399 ORTHO05D005303 6.8e-114 414.5 222 86.5
Prupe.1G288800 Prunus persica HOM05D004399 ORTHO05D005303 8.9e-114 414.1 222 86.5
QL03p073920 Quercus lobata HOM05D004399 ORTHO05D005303 8.9e-114 414.1 223 87.0
FvH4_4g29830 Fragaria vesca HOM05D004399 ORTHO05D005303 1.2e-113 413.7 223 85.2
Glyma.16G032800 Glycine max HOM05D004399 ORTHO05D005303 1.2e-113 413.7 219 90.0
Peaxi162Scf00175g00428 Petunia axillaris HOM05D004399 ORTHO05D005303 1.2e-113 413.7 229 84.7
Manes.05G109300 Manihot esculenta HOM05D004399 ORTHO05D005303 1.5e-113 413.3 219 88.1
TPR.G29232 Trifolium pratense HOM05D004399 ORTHO05D005303 1.5e-113 413.3 222 90.5
FAN17G2847 Fragaria x ananassa HOM05D004399 ORTHO05D005303 3.4e-113 412.1 222 85.6
RcHm_v2.0_Chr4g0438081 Rosa chinensis HOM05D004399 ORTHO05D005303 5.8e-113 411.4 226 83.6
Gohir.A03G104700 Gossypium hirsutum HOM05D004399 ORTHO05D005303 1.7e-112 409.8 219 87.7
MD13G1060600 Malus domestica HOM05D004399 ORTHO05D005303 1.7e-112 409.8 223 84.8
Dinv34060 Davidia involucrata HOM05D004399 ORTHO05D005303 2.2e-112 409.5 245 78.8
PSO017G5651 Papaver somniferum HOM05D004399 ORTHO05D005303 2.2e-112 409.5 223 85.2
FAN12G0059 Fragaria x ananassa HOM05D004399 ORTHO05D005303 2.9e-112 409.1 222 85.1
arahy.Tifrunner.gnm1.ann1.E76E6E Arachis hypogaea HOM05D004399 ORTHO05D005303 4.9e-112 408.3 222 86.9
Potri.008G097100 Populus trichocarpa HOM05D004399 ORTHO05D005303 6.4e-112 407.9 222 86.0
CANSAT11G0637 Cannabis sativa HOM05D004399 ORTHO05D005303 1.1e-111 407.1 220 86.8
Duzib251G0565 Durio zibethinus HOM05D004399 ORTHO05D005303 1.1e-111 407.1 219 86.8
Lj3C1029T7 Lonicera japonica HOM05D004399 ORTHO05D005303 1.1e-111 407.1 223 85.2
CANSAT64G2641 Cannabis sativa HOM05D004399 ORTHO05D005303 1.4e-111 406.8 220 86.8
Solyc05g012150.4 Solanum lycopersicum HOM05D004399 ORTHO05D005303 1.9e-111 406.4 225 84.4
PGSC0003DMG402028313 Solanum tuberosum HOM05D004399 ORTHO05D005303 2.4e-111 406.0 223 84.8
Thecc.02G328800 Theobroma cacao HOM05D004399 ORTHO05D005303 2.4e-111 406.0 219 87.7
CiPaw.05G124200 Carya illinoinensis HOM05D004399 ORTHO05D005303 4.1e-111 405.2 219 85.8
Glyma.07G066700 Glycine max HOM05D004399 ORTHO05D005303 4.1e-111 405.2 219 88.1
Potri.010G157500 Populus trichocarpa HOM05D004399 ORTHO05D005303 4.1e-111 405.2 222 86.5
CAN.G707.11 Capsicum annuum HOM05D004399 ORTHO05D005303 7.1e-111 404.4 223 84.8
Nn3g17119 Nelumbo nucifera HOM05D004399 ORTHO05D005303 7.1e-111 404.4 223 84.8
Ah.02g126810 Amaranthus hybridus HOM05D004399 ORTHO05D005303 9.2e-111 404.1 223 84.3
TWI75G0511 Tripterygium wilfordii HOM05D004399 ORTHO05D005303 9.2e-111 404.1 219 85.8
Aqoxy3G03260 Aquilegia oxysepala HOM05D004399 ORTHO05D005303 1.6e-110 403.3 222 84.2
PGR083G0959 Punica granatum HOM05D004399 ORTHO05D005303 1.6e-110 403.3 219 84.5
Hund05832 Selenicereus undatus HOM05D004399 ORTHO05D005303 1.6e-110 403.3 226 83.2
PSO832G2862 Papaver somniferum HOM05D004399 ORTHO05D005303 2.7e-110 402.5 223 83.4
Cpa.g.sc1.139 Carica papaya HOM05D004399 ORTHO05D005303 6.0e-110 401.4 222 85.1
Sopen05g006940 Solanum pennellii HOM05D004399 ORTHO05D005303 6.0e-110 401.4 223 83.9
MD16G1059800 Malus domestica HOM05D004399 ORTHO05D005303 1.0e-109 400.6 223 83.9
Ciclev10032681m.g Citrus clementina HOM05D004399 ORTHO05D005303 1.3e-109 400.2 222 85.1
MELO3C011412.2 Cucumis melo HOM05D004399 ORTHO05D005303 1.3e-109 400.2 219 84.9
CsaV3_6G033760 Cucumis sativus L. HOM05D004399 ORTHO05D005303 1.3e-109 400.2 219 84.9
Nn4g24779 Nelumbo nucifera HOM05D004399 ORTHO05D005303 1.3e-109 400.2 223 83.4
SGA_v2.0_scaffold16G07803 Striga asiatica HOM05D004399 ORTHO05D005303 1.7e-109 399.8 219 84.0
Migut.L01179 Erythranthe guttata HOM05D004399 ORTHO05D005303 2.3e-109 399.4 228 83.8
PSO478G0010 Papaver somniferum HOM05D004399 ORTHO05D005303 2.3e-109 399.4 223 84.3
EL10Ac6g15013 Beta vulgaris HOM05D004399 ORTHO05D005303 3.0e-109 399.1 219 85.4
MSTRG.7738 Avicennia marina HOM05D004399 ORTHO05D005303 3.9e-109 398.7 224 83.9
Eucgr.B03145 Eucalyptus grandis HOM05D004399 ORTHO05D005303 5.1e-109 398.3 218 84.9
SalBow4G1206 Salvia bowleyana HOM05D004399 ORTHO05D005303 5.1e-109 398.3 223 83.4
Atru.chr11.1611 Acer truncatum HOM05D004399 ORTHO05D005303 6.6e-109 397.9 224 84.8
AUR62003087 Chenopodium quinoa HOM05D004399 ORTHO05D005303 6.6e-109 397.9 219 83.6
ECA233G2368 Erigeron canadensis HOM05D004399 ORTHO05D005303 6.6e-109 397.9 219 83.6
Lj6A777T47 Lonicera japonica HOM05D004399 ORTHO05D005303 6.6e-109 397.9 221 84.2
Cc06_g15640 Coffea canephora HOM05D004399 ORTHO05D005303 8.6e-109 397.5 223 83.0
HanXRQChr12g0363151 Helianthus annuus HOM05D004399 ORTHO05D005303 8.6e-109 397.5 226 81.9
TAR622G1336 Trochodendron aralioides HOM05D004399 ORTHO05D005303 8.6e-109 397.5 222 83.8
vmacro10433 Vaccinium macrocarpon HOM05D004399 ORTHO05D005303 8.6e-109 397.5 226 82.7
Sabra08G0073300 Salix brachista HOM05D004399 ORTHO05D005303 1.1e-108 397.1 219 85.8
Ah.03g138840 Amaranthus hybridus HOM05D004399 ORTHO05D005303 1.5e-108 396.7 223 83.4
CSS0044473 Camellia sinensis var. sinensis HOM05D004399 ORTHO05D005303 1.5e-108 396.7 222 83.3
Lsat_1_v5_gn_8_46460 Lactuca sativa HOM05D004399 ORTHO05D005303 1.5e-108 396.7 217 85.7
ClCG08G010510 Citrullus lanatus HOM05D004399 ORTHO05D005303 1.9e-108 396.4 219 84.9
Haze_11894 Corylus avellana HOM05D004399 ORTHO05D005303 1.9e-108 396.4 223 84.3
Cfa008867 Carpinus fangiana HOM05D004399 ORTHO05D005303 2.5e-108 396.0 223 83.9
Rhsim09G0126300 Rhododendron simsii HOM05D004399 ORTHO05D005303 2.1e-107 392.9 236 78.8
Sc11g0002530 Simmondsia chinensis HOM05D004399 ORTHO05D005303 2.1e-107 392.9 223 81.6
Gorai.005G145900 Gossypium raimondii HOM05D004399 ORTHO05D005303 2.8e-107 392.5 205 89.3
Gohir.D02G129900 Gossypium hirsutum HOM05D004399 ORTHO05D005303 3.6e-107 392.1 210 87.1
Aa31LG2G6990 Aethionema arabicum HOM05D004399 ORTHO05D005303 6.2e-107 391.3 218 82.6
HanXRQChr08g0211681 Helianthus annuus HOM05D004399 ORTHO05D005303 2.4e-106 389.4 219 83.1
THA.LOC104805201 Tarenaya hassleriana HOM05D004399 ORTHO05D005303 3.1e-106 389.0 218 83.0
MBI14_g37191_MAGBIO Magnolia biondii HOM05D004399 ORTHO05D005303 4.0e-106 388.7 218 83.5
Sp2g14510 Schrenkiella parvula HOM05D004399 ORTHO05D005303 4.0e-106 388.7 214 84.6
AUR62007904 Chenopodium quinoa HOM05D004399 ORTHO05D005303 6.8e-106 387.9 219 81.3
DCAR_024127 Daucus carota HOM05D004399 ORTHO05D005303 8.9e-106 387.5 218 83.9
BcaC06g31162 Brassica carinata HOM05D004399 ORTHO05D005303 1.2e-105 387.1 214 83.6
C07p34040 Brassica napus HOM05D004399 ORTHO05D005303 1.2e-105 387.1 214 83.6
BolC7t43918H Brassica oleracea HOM05D004399 ORTHO05D005303 1.2e-105 387.1 214 83.6
Aqoxy4G03091 Aquilegia oxysepala HOM05D004399 ORTHO05D005303 2.0e-105 386.3 213 84.5
SalBow2G2941 Salvia bowleyana HOM05D004399 ORTHO05D005303 2.0e-105 386.3 278 69.1
A06p42990 Brassica napus HOM05D004399 ORTHO05D005303 3.4e-105 385.6 214 83.2
Carub.0005s0281 Capsella rubella HOM05D004399 ORTHO05D005303 3.4e-105 385.6 220 80.9
Hma1.2p1_0566F.1_g179870 Hydrangea macrophylla HOM05D004399 ORTHO05D005303 3.4e-105 385.6 223 79.8
AL5G13480 Arabidopsis lyrata HOM05D004399 ORTHO05D005303 4.4e-105 385.2 220 81.4
BcaC06g31172 Brassica carinata HOM05D004399 ORTHO05D005303 4.4e-105 385.2 213 83.6
Nitab4.5_0007061g0010 Nicotiana tabacum HOM05D004399 ORTHO05D005303 4.4e-105 385.2 223 80.7
Thhalv10004874m.g Eutrema salsugineum HOM05D004399 ORTHO05D005303 7.6e-105 384.4 214 83.2
Oeu031535.3 Olea europaea HOM05D004399 ORTHO05D005303 7.6e-105 384.4 250 74.0
Nitab4.5_0000231g0090 Nicotiana tabacum HOM05D004399 ORTHO05D005303 9.9e-105 384.0 245 75.5
Zm00001eb433530 Zea mays HOM05D004399 ORTHO05D005303 3.8e-104 382.1 220 81.4
BcaB07g30287 Brassica carinata HOM05D004399 ORTHO05D005303 4.9e-104 381.7 214 82.7
AT2G03690 Arabidopsis thaliana HOM05D004399 ORTHO05D005303 8.4e-104 380.9 220 80.5
Os04g0674200 Oryza sativa ssp. japonica HOM05D004399 ORTHO05D005303 1.9e-103 379.8 220 80.0
Sed0000590 Sechium edule HOM05D004399 ORTHO05D005303 2.4e-103 379.4 216 81.5
AL5G13460 Arabidopsis lyrata HOM05D004399 ORTHO05D005303 3.2e-103 379.0 220 79.5
DCAR_026680 Daucus carota HOM05D004399 ORTHO05D005303 7.1e-103 377.9 219 82.2
Os05g0188800 Oryza sativa ssp. japonica HOM05D004399 ORTHO05D005303 1.2e-102 377.1 220 79.5
CARHR146010 Cardamine hirsuta HOM05D004399 ORTHO05D005303 1.6e-102 376.7 220 80.5
BcaC03g17230 Brassica carinata HOM05D004399 ORTHO05D005303 2.7e-102 375.9 214 81.8
BolC2t11249H Brassica oleracea HOM05D004399 ORTHO05D005303 2.7e-102 375.9 214 81.8
A02p33520 Brassica napus HOM05D004399 ORTHO05D005303 3.5e-102 375.6 214 81.3
CDE02G0376 Ceratophyllum demersum HOM05D004399 ORTHO05D005303 1.0e-101 374.0 216 79.6
Sed0002833 Sechium edule HOM05D004399 ORTHO05D005303 1.5e-100 370.2 216 80.1
CDE04G3031 Ceratophyllum demersum HOM05D004399 ORTHO05D005303 1.6e-99 366.7 216 78.2
C02p51640 Brassica napus HOM05D004399 ORTHO05D005303 5.8e-97 358.2 204 82.4
SEGI_29941 Sequoiadendron giganteum HOM05D004399 ORTHO05D005303 1.0e-93 347.4 217 70.0
AUR62019674 Chenopodium quinoa HOM05D004399 ORTHO05D005303 1.7e-93 346.7 226 73.0
AagrBONN_evm.TU.Sc2ySwM_368.1886 Anthoceros agrestis HOM05D004399 ORTHO05D005303 4.9e-88 328.6 216 68.5
Mapoly0124s0026 Marchantia polymorpha HOM05D004399 ORTHO05D005303 3.2e-87 325.9 216 68.5
Pp3c2_220 Physcomitrium patens HOM05D004399 ORTHO05D005303 1.3e-83 313.9 211 65.4
SMO196G0238 Selaginella moellendorffii HOM05D004399 ORTHO05D005303 5.8e-81 305.1 219 63.9
MD13G1061300 Malus domestica HOM05D004399 ORTHO05D005303 1.4e-79 300.4 164 87.2
GSVIVG01000552001 Vitis vinifera HOM05D004399 ORTHO05D005303 7.9e-78 294.7 161 84.5
SalBow4G2688 Salvia bowleyana HOM05D004399 ORTHO05D005303 5.6e-76 288.5 189 75.1
Sed0017877 Sechium edule HOM05D004399 ORTHO05D005303 4.8e-75 285.4 169 76.3
ATR1120G108 Amborella trichopoda HOM05D004399 ORTHO05D005303 5.8e-73 278.5 162 77.8
TPR.G35678 Trifolium pratense HOM05D004399 ORTHO05D005303 1.6e-70 270.4 129 95.3
CBR_g38753 Chara braunii HOM05D004399 ORTHO05D001303 2.5e-68 263.1 213 57.3
SalBow4G1336 Salvia bowleyana HOM05D004399 ORTHO05D005303 3.2e-63 246.1 162 72.8
Cre03.g154850 Chlamydomonas reinhardtii HOM05D004399 ORTHO05D005303 1.7e-59 233.8 216 51.9
PRCOL_00001738 Prasinoderma coloniale HOM05D004399 ORTHO05D005303 4.1e-58 229.2 211 54.0
HanXRQChr10g0298331 Helianthus annuus HOM05D004399 ORTHO05D005303 6.1e-54 215.3 126 78.6
vmacro20929 Vaccinium macrocarpon HOM05D004399 ORTHO05D005303 2.3e-53 213.4 151 72.8
Phvul.007G165400 Phaseolus vulgaris HOM05D004399 ORTHO05D005303 8.8e-53 211.5 110 85.5
unitig_8.g3180 Utricularia gibba HOM05D004399 ORTHO05D005303 1.3e-51 207.6 111 88.3
MCO10G350 Micromonas commoda HOM05D004399 ORTHO05D005303 8.2e-51 204.9 207 46.9
Glyma.02G119500 Glycine max HOM05D004399 ORTHO05D005303 1.1e-50 204.5 113 80.5
SMO187G0002 Selaginella moellendorffii HOM05D004399 ORTHO05D005303 5.3e-42 175.6 137 56.2
MBI14_g45258_MAGBIO Magnolia biondii HOM05D004399 ORTHO05D005303 2.8e-35 153.3 83 80.7
Carub.0005s2415 Capsella rubella HOM05D004399 ORTHO05D005303 6.3e-35 152.1 100 74.0
Cfa024149 Carpinus fangiana HOM05D004399 ORTHO05D005303 2.7e-33 146.7 216 37.0
HanXRQChr13g0414251 Helianthus annuus HOM05D004399 ORTHO05D005303 2.7e-33 146.7 103 73.8
BcaB07g30659 Brassica carinata HOM05D004399 ORTHO05D005303 1.0e-29 134.8 134 50.7
FAN04G2106 Fragaria x ananassa HOM05D004399 ORTHO05D005303 2.3e-29 133.7 75 85.3
Phvul.007G165450 Phaseolus vulgaris HOM05D004399 ORTHO05D005303 6.8e-29 132.1 78 85.9
TPR.G30910 Trifolium pratense HOM05D004399 ORTHO05D005303 5.7e-28 129.0 61 96.7
SalBow4G1060 Salvia bowleyana HOM05D004399 ORTHO05D005303 2.2e-27 127.1 66 86.4
Actinidia12918 Actinidia chinensis HOM05D004399 ORTHO05D005303 5.0e-24 115.9 83 62.7
SalBow4G1426 Salvia bowleyana HOM05D000195 ORTHO05D000377 3.3e-23 113.2 61 90.2
TPR.G35682 Trifolium pratense HOM05D004399 ORTHO05D005303 6.1e-22 109.0 70 81.4
Ca_17614_v3 Cicer arietinum L. HOM05D005789 ORTHO05D007196 4.0e-21 106.3 57 94.7
HanXRQChr01g0013031 Helianthus annuus HOM05D004399 ORTHO05D005303 8.9e-21 105.1 54 87.0
RcHm_v2.0_Chr7g0182561 Rosa chinensis HOM05D004399 ORTHO05D005303 8.9e-21 105.1 62 80.6
ATR1120G192 Amborella trichopoda HOM05D004399 ORTHO05D005303 5.7e-20 102.4 64 79.7
SalBow4G1755 Salvia bowleyana HOM05D004399 ORTHO05D005303 1.3e-19 101.3 66 66.7
Nn4g23036 Nelumbo nucifera HOM05D004399 ORTHO05D005303 1.3e-16 91.3 64 67.2
Glyma.07G066400 Glycine max HOM05D004399 ORTHO05D005303 5.0e-16 89.4 54 85.2
FAN08G1770 Fragaria x ananassa HOM05D004399 ORTHO05D005303 6.6e-16 89.0 128 44.5
HPP92_015023 Vanilla planifolia HOM05D000240 ORTHO05D001153 2.1e-14 84.0 100 47.0
SEGI_28424 Sequoiadendron giganteum HOM05D004399 ORTHO05D005303 6.4e-11 72.4 50 70.0
TPR.G37372 Trifolium pratense HOM05D005789 ORTHO05D007196 2.4e-10 70.5 47 76.6
A09p24540 Brassica napus HOM05D004399 ORTHO05D005303 3.2e-10 70.1 39 76.9
Lalb_Chr12g0202971 Lupinus albus HOM05D005789 ORTHO05D007196 4.1e-10 69.7 52 73.1
Psat7g043760 Pisum sativum HOM05D005789 ORTHO05D007196 4.1e-10 69.7 48 79.2
Medtr8g094610 Medicago truncatula HOM05D005789 ORTHO05D007196 3.5e-09 66.6 48 77.1
Phvul.002G275300 Phaseolus vulgaris HOM05D005789 ORTHO05D007196 2.3e-08 63.9 48 70.8
VMungo0251G2363 Vigna mungo HOM05D005789 ORTHO05D007196 2.3e-08 63.9 48 72.9
DCAR_028902 Daucus carota HOM05D004399 ORTHO05D175529 5.0e-08 62.8 65 55.4
Lalb_Chr07g0184211 Lupinus albus HOM05D005789 ORTHO05D007196 1.9e-07 60.8 50 68.0
SalBow4G0663 Salvia bowleyana HOM05D000195 ORTHO05D000377 2.5e-07 60.5 35 80.0
Lj4g0020231 Lotus japonicus HOM05D005789 ORTHO05D007196 9.5e-07 58.5 47 68.1
Glyma.08G002800 Glycine max HOM05D005789 ORTHO05D007196 2.1e-06 57.4 48 64.6


User provided reference genes

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