Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 2.8e-120 435.3 215 100.0
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 3.4e-102 375.2 221 87.3
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 5.0e-101 371.3 220 85.9
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 9.4e-100 367.1 220 84.1
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 9.7e-81 303.9 239 68.2
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 1.1e-79 300.4 150 99.3
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 2.4e-79 299.3 241 67.2
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 9.1e-79 297.4 236 68.2
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 7.7e-78 294.3 238 65.5
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 8.5e-77 290.8 223 68.6
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 8.8e-74 280.8 173 80.3
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 8.8e-74 280.8 173 80.3
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 5.7e-73 278.1 218 66.5
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 9.8e-73 277.3 173 78.6
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 9.8e-73 277.3 223 65.9
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 1.3e-72 276.9 222 65.3
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 1.7e-72 276.6 234 65.0
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 2.2e-72 276.2 173 78.0
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 2.8e-72 275.8 219 64.4
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 8.3e-72 274.2 221 66.1
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 1.1e-71 273.9 229 63.3
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 1.8e-71 273.1 170 79.4
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 1.8e-71 273.1 232 64.2
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 4.1e-71 271.9 223 67.7
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 9.1e-71 270.8 225 67.1
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 9.1e-71 270.8 219 63.9
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 9.1e-71 270.8 159 80.5
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 1.6e-70 270.0 220 63.2
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 1.6e-70 270.0 221 63.3
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 2.0e-70 269.6 202 67.8
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 2.7e-70 269.2 237 61.6
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 3.5e-70 268.9 212 66.0
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 4.5e-70 268.5 219 63.9
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 5.9e-70 268.1 224 63.8
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 5.9e-70 268.1 224 63.8
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 5.9e-70 268.1 143 86.7
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 7.7e-70 267.7 237 61.2
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 7.7e-70 267.7 226 65.9
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 1.7e-69 266.5 173 74.0
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 2.2e-69 266.2 192 69.3
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 3.8e-69 265.4 169 76.3
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 6.5e-69 264.6 219 63.5
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 1.1e-68 263.8 223 64.1
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 2.5e-68 262.7 224 62.5
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 5.5e-68 261.5 192 67.7
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 5.5e-68 261.5 172 73.8
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 5.5e-68 261.5 170 76.5
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 7.2e-68 261.2 208 65.4
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 9.4e-68 260.8 175 73.1
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 1.6e-67 260.0 176 73.9
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 2.1e-67 259.6 170 75.9
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 4.7e-67 258.5 146 83.6
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 4.7e-67 258.5 172 75.0
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 6.1e-67 258.1 150 80.7
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 6.1e-67 258.1 222 63.1
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 6.1e-67 258.1 143 81.8
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 1.0e-66 257.3 220 63.2
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 3.0e-66 255.8 172 73.8
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 5.2e-66 255.0 210 63.3
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 6.8e-66 254.6 219 63.9
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 8.8e-66 254.2 159 76.1
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 1.2e-65 253.8 169 78.1
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 1.5e-65 253.4 157 80.9
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 1.5e-65 253.4 186 67.7
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 1.5e-65 253.4 157 76.4
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 2.0e-65 253.1 190 65.8
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 2.6e-65 252.7 169 77.5
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 3.4e-65 252.3 182 68.7
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 4.4e-65 251.9 162 77.8
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 5.7e-65 251.5 174 70.7
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 5.7e-65 251.5 174 70.7
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 5.7e-65 251.5 202 63.4
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 1.3e-64 250.4 143 81.8
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 1.7e-64 250.0 155 74.2
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 2.8e-64 249.2 204 63.2
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 2.8e-64 249.2 174 70.7
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 2.8e-64 249.2 174 70.7
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 2.8e-64 249.2 159 75.5
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 4.9e-64 248.4 138 85.5
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 8.3e-64 247.7 183 68.9
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 2.4e-63 246.1 190 67.4
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 3.1e-63 245.7 206 61.7
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 3.1e-63 245.7 158 75.3
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 2.0e-62 243.0 150 74.0
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 4.5e-62 241.9 137 82.5
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 7.7e-62 241.1 214 63.6
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 1.7e-61 240.0 141 80.9
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 2.9e-61 239.2 134 83.6
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.5e-60 236.1 134 84.3
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 7.3e-60 234.6 166 70.5
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 2.1e-59 233.0 180 68.3
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 6.1e-59 231.5 128 85.2
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 6.1e-59 231.5 129 84.5
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 5.2e-58 228.4 164 65.2
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 3.4e-57 225.7 154 66.2
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 5.6e-52 208.4 139 69.1
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.3e-45 187.2 98 86.7
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 9.5e-44 181.0 90 91.1
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 3.1e-42 176.0 130 62.3
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 1.2e-41 174.1 153 52.3
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 2.1e-38 163.3 211 46.0
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 2.7e-38 162.9 157 59.2
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 8.6e-37 157.9 128 61.7
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 9.5e-36 154.5 136 58.1
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.6e-35 153.7 75 92.0
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 1.4e-34 150.6 108 70.4
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 2.9e-32 142.9 95 74.7
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 2.4e-31 139.8 107 67.3
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 1.1e-28 131.0 100 63.0
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 1.2e-27 127.5 92 71.7
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.1e-26 124.4 68 82.4
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 1.2e-25 120.9 77 74.0
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 4.9e-24 115.5 56 94.6


User provided reference genes

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